KEGG   Sorex fumeus (smoky shrew): 130020701
Entry
130020701         CDS       T10594                                 
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha
  KO
K04363  platelet-derived growth factor receptor alpha [EC:2.7.10.1]
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum01521  EGFR tyrosine kinase inhibitor resistance
sfum04010  MAPK signaling pathway
sfum04014  Ras signaling pathway
sfum04015  Rap1 signaling pathway
sfum04020  Calcium signaling pathway
sfum04072  Phospholipase D signaling pathway
sfum04144  Endocytosis
sfum04151  PI3K-Akt signaling pathway
sfum04510  Focal adhesion
sfum04540  Gap junction
sfum04630  JAK-STAT signaling pathway
sfum04810  Regulation of actin cytoskeleton
sfum05163  Human cytomegalovirus infection
sfum05200  Pathways in cancer
sfum05206  MicroRNAs in cancer
sfum05214  Glioma
sfum05215  Prostate cancer
sfum05218  Melanoma
sfum05230  Central carbon metabolism in cancer
sfum05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    130020701 (PDGFRA)
   04014 Ras signaling pathway
    130020701 (PDGFRA)
   04015 Rap1 signaling pathway
    130020701 (PDGFRA)
   04630 JAK-STAT signaling pathway
    130020701 (PDGFRA)
   04020 Calcium signaling pathway
    130020701 (PDGFRA)
   04072 Phospholipase D signaling pathway
    130020701 (PDGFRA)
   04151 PI3K-Akt signaling pathway
    130020701 (PDGFRA)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130020701 (PDGFRA)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130020701 (PDGFRA)
   04540 Gap junction
    130020701 (PDGFRA)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    130020701 (PDGFRA)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    130020701 (PDGFRA)
   05206 MicroRNAs in cancer
    130020701 (PDGFRA)
   05230 Central carbon metabolism in cancer
    130020701 (PDGFRA)
   05231 Choline metabolism in cancer
    130020701 (PDGFRA)
  09162 Cancer: specific types
   05214 Glioma
    130020701 (PDGFRA)
   05218 Melanoma
    130020701 (PDGFRA)
   05215 Prostate cancer
    130020701 (PDGFRA)
  09172 Infectious disease: viral
   05163 Human cytomegalovirus infection
    130020701 (PDGFRA)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    130020701 (PDGFRA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:sfum01001]
    130020701 (PDGFRA)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:sfum04090]
    130020701 (PDGFRA)
Enzymes [BR:sfum01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     130020701 (PDGFRA)
Protein kinases [BR:sfum01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   130020701 (PDGFRA)
CD molecules [BR:sfum04090]
 Proteins
  130020701 (PDGFRA)
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 I-set ig Ig_2 VEGFR1-3_N_Ig-like V-set C2-set_2 VEGFR-1-like_Ig-like DUF3475 Kinase-like
Other DBs
NCBI-GeneID: 130020701
NCBI-ProteinID: XP_055967307
LinkDB
Position
Unknown
AA seq 1096 aa
MGTDHRTFLLLGCLLTGLRLPAAQLSFPSILPNENEKVVRLNSSFSLRCLGESEVNWLYP
TAEDENSNVEIRNEETNSGLFVKVLEVANASAAHTGLYTCYYNHTQTLDESDVEGRHIYI
YVPDPDVAFVPLGLTDSLVIVDEDGTSIIPCRTTDPDTPVTLLNNEGVVPAIYDSRQGFN
GTFPGGTYVCEATIRGKPVRTLSFTVYALKATPELELEMKALQTVYKAGETVEVTCVVFN
NEVVDLKWTYPGQVKGKGNIMLEEIKYPIIKLTYTLKVQEATVKDSGDYECAAGHATKEV
KEMKKVTISVHEKGFVEITPNFSQLETVNLHEVKNFVVDVEAYPPPRISWLKDNLTLIEN
LTEITTDVEKIQEIRYRSKLKLIRAKEEDSGHYTIIVQNEDDVKSYTFELLTQVPASIQD
LVDDHHGSTGGQTVRCTAGGTPLPDIEWMICKDIKKCNNETSWTVLTNNVSNLIMESQPR
DRNTVEGRVTFTKVEETIAVRCLAKNLLGSENRELKLVASTLRSELTVAAAVLVLLVIVI
ISLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRIL
GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVN
LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSRHPEKPKKELDIFGLNPADESTRS
YVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVK
NLLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGL
ARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM
MVDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGHYK
KSYEKIHLDFLKSDHPAVARMRADSDHAYIGVPYKNEEDKLKDWEGGLDEQRLSADSGYI
IPLPDIDPVPEEEEEEEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMM
DDIGIDSSDLVEDSFL
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgggcactgaccaccggactttcctgcttctaggctgtctcctcacaggcctgcgcctc
cccgccgctcagctgtccttcccctccatcctccccaacgagaacgagaaggtggtgcgg
ctgaattcgtccttctctctgcgctgcctgggggagagcgaagtgaactggctgtacccg
acggccgaggacgagaactccaacgtggagatcaggaacgaggagaccaacagcggcctg
ttcgtgaaggtgctggaagtggccaacgcctcggccgcccacacggggctgtacacctgc
tactacaaccacacgcagaccttggacgagagcgacgtcgaaggccgccacatctacatc
tacgtgccagacccggatgtagccttcgtaccactaggactgacagattctttagtcatc
gtggatgaagatggcacttccatcataccttgccgcacaacggatccggacactcctgtc
accttactcaacaatgagggggtggtccctgccatctatgatagcagacaaggctttaat
ggcacctttcctggcgggacctacgtctgtgaggccactatccgaggcaagcccgtccgg
accctctcatttactgtttatgctttaaaagccacaccagagctggagctcgagatgaaa
gctctgcagacggtctacaaggcaggggagacggtggaagtgacctgcgtcgtctttaac
aacgaggtggtcgacctgaagtggacttaccctgggcaagtgaaaggcaaaggaaacatc
atgctagaggaaatcaaatatccaatcatcaaattgacgtacactctgaaggtccaggag
gccacggtgaaagatagtggagattatgaatgtgctgccggccacgccaccaaggaagtc
aaagaaatgaagaaagtcaccatttctgtccacgagaaaggcttcgtggaaatcacgccc
aacttcagccagttggaaactgtcaacttgcatgaagtcaagaattttgtggtggacgtt
gaggcctaccctccccccaggatctcctggctcaaagacaacctgactctgatagaaaac
ctcacggagatcaccacagatgtagaaaagatccaggaaataaggtatcgaagcaaatta
aagctgatccgtgctaaggaagaagacagtggccactacacgatcatagttcagaatgaa
gatgatgtgaagagctatacttttgaactcttaactcaagttcctgcatctattcaggac
ctggttgacgaccaccacggctccacagggggacagactgtgaggtgcacagccggaggg
acgcctcttcctgacattgagtggatgatttgcaaggatattaagaaatgtaacaacgag
acttcgtggacagttttgaccaacaacgtctcaaacctcattatggagagccagccccga
gacaggaatacagtggaaggcagagtgacttttaccaaagtcgaggagaccatcgctgtg
cgctgcttggctaaaaatctccttggatctgagaaccgagagctgaagctggtggcttcc
acgctgcgttccgaactcactgtggccgctgcagtcctggtgctcttggtgattgtgatc
atctcacttattgtcctggttgtcatttggaagcagaaacccaggtatgagattcgttgg
cgggttatcgaatctatcagcccagatggacacgaatatatctatgtggacccaatgcag
ctgccttatgactcgagatgggagttcccaagagatggactggttcttggtcggatcctg
ggatctggtgcctttggaaaagtggttgaaggaactgcctatggattaagccggtcccag
cctgtcatgaaagtagcagtgaagatgctaaaacccacagccagatccagtgaaaagcaa
gctctcatgtcagaattgaaaataatgactcacttgggaccacacttaaatattgtcaac
ttgctgggagcctgtaccaagtcaggccccatttacatcattactgagtactgcttctat
ggggatctggtcaactatttgcataagaatagggacagcttcctcagccgccacccagag
aagccaaagaaagagctggacatctttggattaaaccctgctgatgaaagcacacgaagt
tacgtcattttatcttttgaaaacaacggtgactacatggacatgaagcaggcagacacc
acgcagtatgtgcccatgctggagaggaaggaggtgtctaagtactcggacattcagaga
tccctgtatgaccgcccggcctcctacaagaagaagtctatgttagactcagaagtcaaa
aacctcctttcggatgataattcagaaggcctcactctgttggatttgttgagctttacc
tatcaagttgcccgaggaatggaatttttggcctcaaaaaactgtgtccaccgggacttg
gctgctcgcaacgttctccttgctcaagggaaaattgtaaagatctgtgactttggcctg
gccagagacatcatgcatgattcaaactacgtgtcaaaaggcagtacctttctccctgtg
aagtggatggctccagagagcatctttgacaacctctacaccacgctgagcgatgtctgg
tcttacggcattctgctgtgggagatcttttctctcggtggcacaccctaccctggcatg
atggtggattctactttctacaataagatcaagagtggctaccggatggccaagcctgac
catgccaccagtgaagtctatgagataatggtgaagtgctggaacagtgagccagagaag
agaccctccttctaccacctcagtgagattgtggagaatctgctgcctgggcattataaa
aagagctacgaaaagattcatctcgacttcctcaagagcgaccatcctgccgtggcgcgc
atgcgtgcggactcggaccatgcctacatcggcgtcccctacaagaacgaggaagacaag
ctgaaagactgggagggcgggctggatgagcagcggctgagcgccgacagtggctacatc
atcccgctgccagacatcgaccctgttcctgaggaggaggaggaagaggaggaggaggac
ctaggcaagaggaacagacacagctcacagacctctgaggagagtgccattgagacgggc
tctagcagttctacattcatcaagagggaggatgagaccattgaagacattgacatgatg
gacgacattggcatagactcctcggacctggtggaggacagcttcctgtaa

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