Sorex fumeus (smoky shrew): 130020783
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Entry
130020783 CDS
T10594
Symbol
SLC4A4
Name
(RefSeq) electrogenic sodium bicarbonate cotransporter 1 isoform X1
KO
K13575
solute carrier family 4 (sodium bicarbonate cotransporter), member 4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04964
Proximal tubule bicarbonate reclamation
sfum04972
Pancreatic secretion
sfum04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09150 Organismal Systems
09154 Digestive system
04972 Pancreatic secretion
130020783 (SLC4A4)
04976 Bile secretion
130020783 (SLC4A4)
09155 Excretory system
04964 Proximal tubule bicarbonate reclamation
130020783 (SLC4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfum02000
]
130020783 (SLC4A4)
Transporters [BR:
sfum02000
]
Solute carrier family (SLC)
SLC4: Bicarbonate transporter
130020783 (SLC4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HCO3_cotransp
Band_3_cyto
PTS_EIIA_2
Zip
DUF4770
Motif
Other DBs
NCBI-GeneID:
130020783
NCBI-ProteinID:
XP_055967459
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MNSSVQVNLPKSWAASSGSLQEKSEHSFFLFYYYRMEDEAVLDRGASFLKHVCDEEEVEG
HHTIYIGVHVPKSYRRRRRHKRKTGHKEKKEKERASENYSDKSDVENADESSSSILKPLI
SPAAERIRFILGEEDDSPAPPQLFTELDELLAVDGQEMEWKETARWIKFEEKVEQGGERW
SKPHVATLSLHSLFELRTCMEKGSIMLDREASSLPQLMEMIVDHQIETGLLKPDLKDKVT
YTLLRKHRHQTKKSNLRSLADIGKTVSSASRMFTNPDNGSPAMAHRNLTSSSLNDISDKP
EKDQLKNKFMKKLPRDAEASNVLVGEVDFLDTPFIAFVRLQQAVMLGALTEVPVPTRFLF
ILLGPKGKAKSYYEIGRAIATLMSDEVFHDIAYKAKDRQDLIAGIDEFLDEVIVLPPGEW
DPTIRIEPPKSLPSSDKRKNMYSGGENVQMNGDTPHDGGHGGGGHGDCEELQRTGRFCGG
LIKDIKRKAPFFASDFYDALNIQALSAILFIYLATVTNAITFGGLLGDATDNMQGVLESF
LGTAVSGAVFCLFAGQPLTILSSTGPVLVFERLLFNFSKDNNFDYLEFRLWIGLWSAFLC
LILVATDASFLVQYFTRFTEEGFSSLISFIFIYDAFKKMIKLADYYPINSDFKVGYQTHF
SCACLPPDPVNISIPNDTTLAPEELPSIPSIDMYHNTTFDWTFLSTKECLKYGGKLVGNN
CNFVPDISLMSFILFLGTYTSSMALKKFKTSRYFPTMARKLISDFAIILSILLFCVIDAL
IGVDTPKLIVPSEFKPTSPNRGWFVPPFGGNPWWVYLAAAIPALLVTILIFMDQQITAVI
VNRKEHKLKKGAGYHLDLFWVAVLMVVCSFMALPWYVAATVISIAHIDSLKMETETSAPG
EQPKFLGVREQRVTGTLVFILTGLSVFMAPILKFIPMPVLYGVFLYMGVASLNGVQFMDR
LKLLLMPLKHQPDFIYLRHVPLRRVHLFTFLQVLCLALLWILKSTVAAIIFPVMILALVA
VRKGMDYLFSQHDLSFLDDVIPEKDKKKKEDEKKKKKKKGSLDSDNDDEKGHQHSSNATH
HADKIPFLQSLGLPSPPRTPVKVVPQIRIELEPEDNDYFWRNKGTETTL
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcagcgtgcaggttaacctgcccaaaagctgggctgcttcaagtggctccctc
caggagaagtctgagcattctttttttcttttttattactataggatggaggatgaagct
gtcctggacagaggggcttccttccttaagcatgtatgtgatgaagaagaagtagaaggc
caccacaccatctatattggggttcacgtgccgaagagctacaggagaaggagacgacac
aagaggaagacagggcacaaagaaaagaaggaaaaggagagagcctcggagaactactct
gataagtcggatgtggaaaacgcagatgaatctagcagtagcatcttaaaacctctcatc
tctcctgccgccgaacgcattcgcttcattctgggagaagaagatgacagtccagcaccc
ccccagctcttcactgaattggatgaacttctggctgtggatgggcaagagatggaatgg
aaggagacggcgaggtggattaaatttgaagaaaaagtggaacagggaggagagagatgg
agcaagccccatgtggccacattatcccttcatagcttatttgagctgaggacatgtatg
gagaaaggatccatcatgcttgacagggaggcctcttctctccctcagttaatggaaatg
attgttgaccatcagattgaaactggcctattgaaacctgaccttaaggacaaggtaacc
tatactttgctccggaagcaccgacatcaaaccaagaaatccaaccttcgctccctggct
gatattgggaagacagtttccagtgccagtaggatgtttaccaaccctgataatggtagt
ccagccatggctcataggaatctgacttcttccagcctgaatgatatttctgataaaccg
gaaaaggatcagctgaagaataagttcatgaaaaaactgccgcgagatgcagaagcttcc
aatgtgcttgttggggaggttgatttcctggacacgcctttcattgcctttgttcggcta
caacaggctgttatgttgggggccctgactgaggtccctgtgcccacaaggttcttattc
attcttctaggtcctaaaggaaaggccaagtcctactatgagattggcagagctattgcc
accttgatgtctgatgaggtgttccatgacattgcttataaggcaaaagataggcaggac
ctgattgctggcattgatgagttcttagatgaagtcattgtgcttccccccggggaatgg
gacccaacaatcaggatagagcccccaaagagtcttccatcatctgacaaaaggaagaat
atgtactcaggtggagagaatgttcagatgaatggtgacaccccccatgacggaggccat
ggaggaggaggtcatggagattgtgaagaattgcagaggactggacggttctgtggcggg
ctcattaaggatatcaagaggaaagcaccattttttgccagtgacttttatgatgcttta
aatattcaggcactttcagcaattcttttcatctatctggcaaccgtaactaatgctatc
acttttggaggactgctcggggatgccaccgacaacatgcagggtgtgctggagagcttc
ttgggcaccgctgtctctggagctgtcttttgcctctttgccggtcaaccactcactatc
ttgagcagcacaggacctgttctagtttttgagaggcttctatttaatttcagcaaggac
aataattttgactacttggagtttcgcctttggattggcctgtggtcagccttcctgtgt
ctcattttggtggcgactgacgctagcttccttgttcagtacttcactcgctttacagag
gagggtttctcttctctgatcagctttatttttatttatgatgcgttcaagaaaatgatc
aagttagcagattactaccccatcaattccgacttcaaagtgggctatcagactcacttt
tcctgtgcctgtctgccccctgacccagttaatatctcaatacctaatgataccacattg
gctcccgaggagttgccaagtattccttctattgacatgtaccataacaccacctttgac
tggacatttttgtcgacaaaggagtgcttgaagtacggaggaaagctcgtggggaacaac
tgtaattttgttcctgatatctctctcatgtctttcatcctcttcttgggcacctacacc
tcttctatggctctgaaaaaattcaaaacaagtcgttattttccaaccatggcaagaaaa
ctgatcagtgactttgccattatcttgtccatcctcctcttttgtgtaatagatgccctg
ataggtgtggatactccaaaactaattgtgccaagcgaattcaagccaacaagtccaaac
agaggttggtttgttccaccatttggaggaaacccctggtgggtctaccttgcagctgct
atccctgctttgttggtcaccattctgatttttatggaccagcagatcacagctgtgatt
gtaaacaggaaagaacataaactcaagaaaggagctgggtaccacctggacctcttttgg
gtggcagtgctcatggtggtgtgctccttcatggccctcccgtggtatgtggctgctacc
gtcatctccattgcccacattgacagcttgaagatggaaacagagacatccgcacctgga
gaacaaccaaagtttcttggagtgagagaacaaagagtcactggaacccttgtgtttatt
ctgaccggtctgtccgtttttatggctcctatcctgaagtttattcccatgcctgttctc
tacggtgtgttcctctatatgggggtagcttcccttaatggtgtacagttcatggatcgt
ctgaagctgcttttgatgcccttgaagcatcaacctgactttatctacctgcgccatgtc
cccctgcgcagagtccacctgttcaccttcctgcaagtgttgtgtcttgccctgctctgg
atcctcaagtcaactgtggctgctatcatcttcccagtcatgatcttggcacttgtagct
gtcagaaaaggcatggattacctattctcccagcatgatctcagcttcctagatgatgtc
attccagaaaaggacaagaaaaagaaggaggatgagaagaaaaagaaaaagaagaaagga
agtctggacagtgacaatgatgatgagaaaggtcaccaacattcctcgaacgccacacat
catgctgataaaattcctttccttcagtcactcggtttgccaagtcctcctagaactcca
gtaaaagtcgtgcctcaaattaggatcgaacttgagcctgaagacaatgattatttctgg
aggaacaagggaacagaaaccacattgtaa
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