Sorex fumeus (smoky shrew): 130020898
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Entry
130020898 CDS
T10594
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
sfum04940
Type I diabetes mellitus
sfum05134
Legionellosis
sfum05152
Tuberculosis
sfum05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130020898 (HSPD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
130020898 (HSPD1)
05152 Tuberculosis
130020898 (HSPD1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
130020898 (HSPD1)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
130020898 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130020898 (HSPD1)
03110 Chaperones and folding catalysts [BR:
sfum03110
]
130020898 (HSPD1)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130020898 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130020898 (HSPD1)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
130020898 (HSPD1)
Messenger RNA biogenesis [BR:
sfum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
130020898 (HSPD1)
Chaperones and folding catalysts [BR:
sfum03110
]
Heat shock proteins
HSP60 / Chaperonin
130020898 (HSPD1)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
130020898 (HSPD1)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130020898 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
130020898 (HSPD1)
Exosomal proteins of breast cancer cells
130020898 (HSPD1)
Exosomal proteins of colorectal cancer cells
130020898 (HSPD1)
Exosomal proteins of bladder cancer cells
130020898 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
130020898
NCBI-ProteinID:
XP_055967523
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLPAVLRQIRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
EIGTIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKG
KGDKAQIEKRIQEIIEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLTPANEDQKIGIDIIKRTLKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMVGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEVVVTEIPKEEKDPGMAGMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgattaccagcagtccttcgccagatcagaccagtgtccagggcactggcacct
catctcactcgggcttatgccaaagatgtcaaatttggtgcagatgcccgggccttaatg
cttcaaggtgtagaccttttagccgatgccgtagccgttactatggggccaaagggaaga
acagtgattattgaacagagttggggaagtcccaaagtaaccaaagatggtgtgactgtt
gctaagtccattgacttaaaagataaatataaaaatattggcgccaaacttgttcaagat
gttgccaataacacaaatgaagaggctggagatggtaccactactgctactgtattggca
cgatcaattgccaaggagggcttcgaaaagattagcaaaggtgctaacccagtggaaatc
agaagaggtgtgatgctagctgtagatgcagtaattgctgaacttaaaaagcagtctaaa
ccagtgacaactcctgaagaaattgctcaggttgctactatttctgctaatggagacaaa
gaaattggcaccatcatttctgatgcaatgaagaaggttggaaggaagggtgtcatcaca
gtaaaggatggaaaaacgctgaatgatgaattagaaattattgaagggatgaagtttgat
cgaggttatatttctccatattttattaatacttcaaaaggtcagaaatgtgaattccaa
gatgcctacgttctgctgagtgaaaagaaaatttctagtgtccagtccattgtacctgct
cttgaaattgccaatgctcaccggaagcccctggtcataattgctgaagatgttgatgga
gaagctttgagtacgcttgttttaaataggctaaaggtgggtcttcaagttgtagcagtc
aaagccccaggttttggtgacaataggaagaaccagcttaaagacatggctattgctact
ggtggcgctgtatttggagaagaaggattaactctgaatcttgaggacgttcagccacat
gacttaggaaaagttggagaggtcattgtaaccaaagatgatgccatgctattgaaagga
aaaggtgacaaggctcaaattgaaaaacgtattcaagaaatcattgaacagttggatatc
acaaccagtgaatatgaaaaggaaaaactgaatgaacgcttggcaaaactttcagatggt
gtggctgtgctaaaagttggtggcacaagtgatgttgaagtgaacgaaaagaaagacaga
gttacagatgccctcaatgctacacgagctgctgttgaagaaggcattgttctgggaggg
ggttgtgctctgcttcggtgcattccagccttggactcattaacgcccgctaatgaagat
cagaaaattggcatagatattattaaaagaacactcaagattcctgcaatgaccattgct
aagaatgcaggtgttgaaggatcattgattgttgagaagattttacagagttcctcagaa
gttggttatgatgctatggttggagattttgtgaatatggtggaaaaaggaatcattgat
ccaacaaaggttgtaagaactgctttactggatgctgccggagtagcctctctgttaact
acagcagaagttgtagttactgaaattcctaaagaagaaaaggaccctggaatggctgga
atgggtgggatgggaggaggtatgggaggtggcatgttctaa
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