Sorex fumeus (smoky shrew): 130020911
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Entry
130020911 CDS
T10594
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03450
Non-homologous end-joining
Brite
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
130020911 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130020911
NCBI-ProteinID:
XP_055967554
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Position
Unknown
AA seq
733 aa
AA seq
DB search
MARSGNKAAVVLCMDVSSAMNDSFMGEESSFELAKKVITMFVQRQVFAETKDEVALVLFG
TDGTENALAGEDQYQNITVHRHLMLPDFDLLDDLENRIQPGSQHADFVDALIVCMDLIQQ
ETVGKKFEKRHIEVFTDLSSPFSKDQLETVIENLKRSGISLQFFLPFSIGKEDGTGDRGD
GDFTPARHRPSFPLKGITEQQKEGIRTVKKIMTSLEGEEGLEEIYSFSESLRQLCVFKKI
ERRPMPWPCQLTIGSNLSIRIVAYKSIVQEKVKKSWTVVDARTHKKEDIQKETVYCLNDD
DETEVSKDNIIQGFRYGSDIIPFSKVDEEQMKYKSDGKCFSVLGFCRSSQVHRKYFMGNQ
VLKVFAAKDDEAAAVALSSLIHALDELDMVAIVRYAYDRRANPQVGVAFPYIKDTYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLNAIDALIDSMSLVKKDEEEDAIEDLFPST
KIPNPQFQRLFQCLLHRALHPGEPLPPIQPHILNMLDSPAEVTAKCEIPLSKVKTLFPLT
EVIKKKDQMTAQDIFQDNHEEGPTSKKLKTEEGEAPFSVSSLAEGTVTSVGSVNPVENFR
LLVRQKNSSFGEVSQQLINHIEQFLDTNETAYFMKSMDCIKAFRKEAIQFSEEKRFNDFL
KALREKVEIKQLNHFWDIIVQDGISLITKDEAAGSSVTAEEAKKFLAPKENTNDEKAAMP
EEGGDVDDLLDLI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtcggggaacaaggcagctgttgtgctgtgtatggatgtgagctccgccatg
aatgattccttcatgggtgaagagtcctcatttgaactagcaaagaaggtgataaccatg
tttgtccagcgacaggtgtttgcagagaccaaggatgaagttgcattagtccttttcggg
acagatggcaccgagaatgcccttgctggggaagatcaatatcagaacatcacagtgcac
agacatctcatgctaccagattttgacttgttggatgaccttgaaaacagaatccagcca
ggttctcaacatgctgacttcgtggatgcactcatcgtgtgcatggatttgattcagcaa
gaaacagttggaaagaagtttgagaagagacatattgaagtcttcactgacctcagcagc
ccattcagcaaagatcaactggagacggtcatcgagaacttgaagagatccggcatctcc
ctgcagttcttcctgcctttctccattggcaaggaagatggaaccggggacagaggagat
ggtgacttcaccccagcccgtcacagaccctcatttcctctgaagggaattactgagcag
caaaaagaaggtattcggacagtgaaaaaaataatgacgtctttagaaggcgaagaaggg
ctggaggaaatttattccttcagtgagagtctgagacagctgtgtgtctttaagaaaatt
gagaggcgtcccatgccctggccctgccaactaaccattggctccaatttgtccataagg
attgtggcttataaatcgattgtacaggagaaagttaaaaagtcttggacagttgtggat
gcaagaacccacaagaaagaagatatacaaaaagaaaccgtttattgcttgaatgatgat
gatgagacggaagtttcgaaagacaatatcattcaaggattccgctatgggagcgatatc
atccctttctctaaagtggatgaggagcaaatgaaatataaatcggacggaaagtgcttc
tctgttttgggattttgtagatcttctcaggtccacaggaagtattttatgggaaatcaa
gttctaaaggtctttgcagcaaaagacgatgaggcagccgcggtcgctctgtcctccctc
attcatgccctggatgagttagacatggtggccatcgttcgatatgcttatgacagaaga
gcgaaccctcaagttggcgtggcttttccttatatcaaggacacctatgagtgtttagtg
tatgtgcagctgcctttcatggaagacttgcggcagtacatgttttcctccttgaaaaat
aacaagaagtgcactcccacagaagcgcagctgaatgctattgatgctttgattgactcc
atgagcttggtaaagaaagatgaagaagaggatgctattgaagacttgttcccatctacc
aaaatccccaatcctcagtttcagaggttatttcagtgtctgctgcacagagcattacat
cccggggagcctctgcctccaattcagccacacattttgaacatgctggattccccggcg
gaagtaacagctaagtgtgagattcctctctctaaagtaaagactcttttccctctgact
gaagtcatcaagaaaaaggatcaaatgactgctcaggacattttccaagacaaccatgaa
gaaggacccacatctaaaaaactcaagactgaggaaggggaagccccatttagtgtcagt
agcctggctgaaggcactgtcacctctgttggaagtgtgaatcctgtggaaaatttccgc
ctgctagtcaggcagaagaattccagctttggggaagtgagtcaacagctgataaatcac
attgaacagtttttggatacgaacgaaacagcctattttatgaagagcatggattgcatc
aaagccttccggaaagaagccattcagttttcagaagagaagcgttttaacgatttcttg
aaggcccttcgagaaaaggtggagattaaacaattaaatcatttctgggacatcatcgtt
caggatggaatttctctgatcaccaaagatgaagccgctggaagctctgtcacagctgaa
gaagccaaaaagtttctggcccccaaagaaaacacaaatgatgaaaaagcagccatgcct
gaggaaggtggtgatgtggatgatttactggacttgatctag
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