Sorex fumeus (smoky shrew): 130020981
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Entry
130020981 CDS
T10594
Symbol
CHPF
Name
(RefSeq) chondroitin sulfate synthase 2
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sfum01100
Metabolic pathways
Module
sfum_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130020981 (CHPF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sfum01003
]
130020981 (CHPF)
Enzymes [BR:
sfum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
130020981 (CHPF)
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
130020981 (CHPF)
Glycosyltransferases [BR:
sfum01003
]
Glycan extension
O-Glycan
130020981 (CHPF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
130020981
NCBI-ProteinID:
XP_055967670
LinkDB
All DBs
Position
Unknown
AA seq
778 aa
AA seq
DB search
MRASLLLSVLRPAGPVAVGISLGFTLSLLSVTWVEEPCGPGPPQPGDSELPPRGNTNAAR
RPNSVQPGAERERPGAGGAAAAAGENWEPRVLPYHPAQPGQAAKKAVRTRYISTELGIRQ
KLLVAVLTSQATLPTLGVAVNRTLGHRLERVVFLTGARSRRAPPGMAVVTLGEERPIGHL
HLALRHLLEQHGDDFDWFFLVPDATYTEAHGLARLVGHLSLATAAHLYLGRPQDFIGGEP
APGRYCHGGFGVLLSRALLQQLRPHLESCRNDIISARPDEWLGRCILDATGVGCTDRHEG
VQYSYLELSPGEPVQERDPRFRSALSAHPVRDPVHMYQLHKAFARAELERTYQEIQELQW
EIQNTSRLAADGDRAAAWPVGIPAPSRPASRFEVLRWDYFTEQHAFSCADGSPRCPLRGA
DRADVADVLGAALEELNRRYHPALRLQKQQLVNGYRRFDPARGMEYTLDLQLEALTPQGG
RQPLTRRVQLLRPLSRVEILPVPYVTEASRLTVLLPLAASERDLAPGFLEAFATAALEPG
DAAAALTLLLLYEPRQAQRAAHADVFAPVKAHVAELERRFPGARVPWLSVQSAAPSPLRL
MDLLSKKHPLDTLFLLAGPDTVLTPEFLNRCRMHAIAGWQAFFPMHFQAFHPAVAPPQGP
GPPELGRDTGRFDRQASTEACFYNSDYVAARGRLAAAPEQEEELLEGLDVYELFLRFSGL
HVLRAVEPALLQRYRAPACSARLSEDLYHRCRQSALEGLGSRTQLAMLLFEQEQGNST
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcatcgctgctgctgtcggtgctgcggcccgcggggcccgtggccgtgggcatc
tcgctgggcttcaccctgagcctgctcagcgtcacctgggtggaggagccgtgcggcccg
gggccaccccagcccggagattcggagctgcccccgcgcggcaacaccaacgcggcgcgc
cggcccaattcggtgcagcccggagcggagcgcgagaggcccggggccggcggcgccgcc
gccgccgccggggagaactgggagccgcgggtcttgccctaccaccctgcacagcccggc
caggccgccaagaaggccgtcaggacccgctacatcagcacggagctgggcatcaggcag
aagctgctggtggccgtgctgacctcccaggccactttgcctacgctgggcgtggccgtg
aaccgcaccctggggcaccggctggaacgtgtggtcttcctgacgggagccaggagtcgc
cgggcacctccgggcatggccgtggtcaccctaggcgaggagcgacccatcgggcacctg
cacctggccttgcgccacctgctggagcagcacggggacgactttgactggttcttcctg
gtccccgacgccacctacaccgaggcccacggactggcgcgcctcgtgggccacctcagc
ctggccaccgcggcccacctctacctgggccgcccccaggacttcatcgggggagagccc
gcccccggccgctactgccacggaggcttcggggtgctgctgtcccgcgcgctgctccag
cagttgcgcccccacctggaaagctgccgcaacgacatcatcagcgcgcgccccgacgag
tggctgggccgctgcatcctggatgccaccggggtgggttgcaccgaccgtcacgagggg
gtacagtacagctatctggagctgagtcctggcgagcccgtgcaggagcgggaccctcgt
ttccgcagcgccctgagtgcccacccggtgcgggaccccgtgcacatgtaccagctgcac
aaggcgtttgctcgcgcggagctggaacgcacataccaggagatccaggagctgcagtgg
gagattcagaacacgagccgcctggccgccgatggggatcgggcagctgcctggccagtg
ggcatccccgccccgtcacgccctgcctcccgcttcgaggtgctgcgctgggactatttc
accgagcagcacgcattctcctgcgcggacggctcgccccgctgccccctccggggggcc
gaccgcgccgacgtggcggacgtcctgggggccgccctggaagagctcaaccgccgctac
cacccagctctgcggctccagaagcagcagctggtgaacggctaccgccgctttgacccg
gcacggggcatggagtacacgctggacttgcagctggaggcgctgaccccccagggcggc
cggcagcccctcacacgccgggtgcagctgctccggccactgagccgcgtggagatcttg
ccggtaccctatgtcaccgaagcatcccgtctcaccgtgttgctgcctctggccgcctcg
gagcgtgacctggcgccgggcttcctggaggccttcgccacggccgccctggagcccggg
gatgcggcggccgcgctgaccctcctgctgctgtacgagccccggcaggcccagcgcgcc
gcgcacgccgacgtctttgccccggtcaaggcccacgtggcagagctagagcggcgcttc
ccgggcgcccgggtgccctggctcagcgtgcagagcgccgcgccctccccactgcgcctc
atggatctgctctccaaaaagcacccgctggacacactcttcctgctggccgggccggac
acggtgctcacgcccgagttcctcaaccgctgccgcatgcacgccatcgcgggctggcag
gccttcttccccatgcacttccaggccttccacccggccgtggccccgccgcagggcccc
gggcccccagagctgggccgagacaccggccgcttcgaccggcaggcctccacggaggcc
tgcttctacaattccgactacgtggcggcccgcgggcgactggccgccgccccggagcag
gaggaggagctgctggagggcctggacgtgtacgagctgttcctgcgcttctcgggcctg
cacgtgctgcgcgctgtggagccggccctgctgcagcgctaccgggcgcccgcgtgcagc
gcgcggctcagcgaggacctgtatcaccgctgccgccagagcgcgctcgagggcctgggc
tcacgcacgcagctggccatgctgctcttcgagcaggagcagggcaacagcacctga
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