Sorex fumeus (smoky shrew): 130020984
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Entry
130020984 CDS
T10594
Symbol
TUBA4A
Name
(RefSeq) tubulin alpha-4A chain isoform X1
KO
K07374
tubulin alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04145
Phagosome
sfum04210
Apoptosis
sfum04530
Tight junction
sfum04540
Gap junction
sfum04814
Motor proteins
sfum05010
Alzheimer disease
sfum05012
Parkinson disease
sfum05014
Amyotrophic lateral sclerosis
sfum05016
Huntington disease
sfum05020
Prion disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130020984 (TUBA4A)
09143 Cell growth and death
04210 Apoptosis
130020984 (TUBA4A)
09144 Cellular community - eukaryotes
04530 Tight junction
130020984 (TUBA4A)
04540 Gap junction
130020984 (TUBA4A)
09142 Cell motility
04814 Motor proteins
130020984 (TUBA4A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130020984 (TUBA4A)
09164 Neurodegenerative disease
05010 Alzheimer disease
130020984 (TUBA4A)
05012 Parkinson disease
130020984 (TUBA4A)
05014 Amyotrophic lateral sclerosis
130020984 (TUBA4A)
05016 Huntington disease
130020984 (TUBA4A)
05020 Prion disease
130020984 (TUBA4A)
05022 Pathways of neurodegeneration - multiple diseases
130020984 (TUBA4A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130020984 (TUBA4A)
03036 Chromosome and associated proteins [BR:
sfum03036
]
130020984 (TUBA4A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130020984 (TUBA4A)
04147 Exosome [BR:
sfum04147
]
130020984 (TUBA4A)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130020984 (TUBA4A)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130020984 (TUBA4A)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130020984 (TUBA4A)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130020984 (TUBA4A)
Exosomal proteins of other body fluids (saliva and urine)
130020984 (TUBA4A)
Exosomal proteins of colorectal cancer cells
130020984 (TUBA4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
130020984
NCBI-ProteinID:
XP_055967674
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MEGRGVGARSPGRSERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGD
DSFTTFFCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARG
HYTIGKEIIDPVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSK
LEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTN
LNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQL
SVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDW
CPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVH
WYVGEGMEEGEFSEAREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggagggccggggtgtcggagcgcgctcccctggtcggagtgagcgtgaatgcatctct
gtgcacgtggggcaggcaggtgtccagatgggcaatgcctgctgggagctctactgcctg
gagcacgggatccagcccgacgggcagatgcccagcgacaagaccatcgggggaggggac
gactctttcaccaccttcttctgcgagacaggggccgggaaacacgtgccccgcgctgtg
tttgtggatctggaacccactgtgatcgatgagatacgaaatggcccgtaccgccagctc
ttccaccccgaacagctcatcactggcaaggaggatgcagcaaacaactatgcccggggt
cactacaccatcggcaaggagatcatcgaccctgtcctggaccggatccgcaagctggct
gaccagtgcacaggcctccagggcttcctggtcttccacagcttcggagggggcaccggc
tccggcttcacctcgctgctcatggagcgactctccgtcgactatggcaagaagtccaag
ctggagttctccatctacccggccccccaggtgtccacagccgtggtggagccctacaac
tccatcctgaccacacacaccaccctggagcactcggactgcgccttcatggtggacaac
gaggccatctacgacatctgccggcgcaacctggacatcgagcggcccacctacaccaac
ctcaaccgcctcatcagccagatcgtgtcctccatcaccgcctcgctgcgcttcgacggg
gccctcaacgtggacctgaccgagttccagaccaacctggtgccctacccccgcatccac
ttccccctggccacctacgcgccggtcatctcggccgagaaggcgtaccacgagcagctg
tcggtggccgagatcaccaatgcctgcttcgagccggccaaccagatggtgaagtgcgac
ccccgccatggcaagtacatggcctgctgcctgctgtaccggggcgacgtggtgcccaag
gatgtcaacgccgccatcgccgccatcaagaccaagcgcagtattcagttcgtggactgg
tgccccacgggcttcaaagtgggcatcaactaccagcccccgacggtggtgcccggggga
gacctggccaaggtgcagcgggccgtgtgcatgctgagcaacaccaccgccatcgccgag
gcctgggcccgcctggaccacaagttcgacctgatgtatgccaagcgggcgttcgtgcac
tggtacgtgggcgagggcatggaggagggcgagttctccgaggcccgggaggatatggcc
gccctggagaaggattacgaggaagtgggcatcgactcgtacgaggatgaggacgaggga
gaagagtag
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integrated database retrieval system
