Sorex fumeus (smoky shrew): 130021131
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Entry
130021131 CDS
T10594
Symbol
LINGO4
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130021131 (LINGO4)
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
130021131 (LINGO4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
LRR_1
Ig_3
ig
LRR_5
Ig_2
LRR_14
V-set
LRRNT
LRR_Zer-1
LRR_LRWD1
Ig_6
C2-set_2
Motif
Other DBs
NCBI-GeneID:
130021131
NCBI-ProteinID:
XP_055968206
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MAAVAALRLAWPPWPLLLLLLGAPGSGGCPALCDCSSQPRAVLCAHRRLEAVPGGLPLDT
QLLDLSGNRLWGLQRGMLSRLGLLQELDLSYNQLSTLEPGAFHGLQSLLSLKLQGNRLRI
MAPGVFAGLSALTLLDLRLNQIVLFLDGAFRELGSLQQLEVGDNHLVFVAPGAFAGLTRL
SSLTLERCNLSSVPGLALARLPELVALRLRELDIWRLPAGALRGLGQLEELEIHHWPSLE
VLEPGSLMGLNLSILAITRCNLTTVPVQALHHLSFLRVLDLSQNPISAIPAHSLSPLVRL
QELRLSGASLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTC
DCRLLWLLRLRRRLDFGKSPPACAGPQHVQGKSLRDFSDILPPGHFTCQPALIRKSGPRW
VAAEEGSQAIFSCSGDGDPAPTVSWRRPQGAWLGQAGRVRVLEDGTLEIRSVQLRDQGAY
VCVVSNIAGNDSLKTWLEVIPVEPANGTLLDPNITMPGIPGPFFLDGRGVAMVLAVGFLP
FLTSVTLCFGLIALWSKGKGRVKHHVTFDFVAPRPSGDKNAGSNRVTAKLF
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtcgcggccctgaggctggcctggcccccgtggccgctgcttctgctcctc
ctgggggcgcccggcagtggcggctgcccggcgctctgtgactgcagctcccagccccgg
gcggtgctctgtgcccatcggcgcctggaggccgtcccagggggcctccctctggacact
cagctcctggacctcagcgggaaccgcctgtggggcctgcagcggggcatgctgtctcgc
ctgggcctgctccaagaactggacctcagctacaaccagctgtccactctcgagcccggg
gccttccacggcctgcagagcctactcagcctcaagctgcagggcaaccggctgcgcatc
atggcccccggggtcttcgctggactgtccgccctcacgctgctggatctacgcctcaac
cagatcgtcctcttcctggacggggcgttccgggagctgggcagcctccagcagctggag
gtgggcgacaaccacctggtgtttgtggccccgggagcctttgcaggcctgaccagactc
agcagcctgaccctagagcggtgtaacctcagctcggtccctggcctggccctggcgcgg
ctgcctgagctggtggccctccggctgcgggagctggacatctggaggctgccagcgggc
gccctccggggactgggccagctagaggaactggagatccaccactggccgtctctggag
gttctggagccgggcagcctgatgggcttgaacctcagcatcctggccatcacccgctgc
aatctgaccactgtgcccgtccaggccctgcaccacctcagcttcctccgagtgctggac
ctgtcccagaaccccatctcggccatccccgcccacagcctcagtcccctggtgcgcctc
caggagctgcgcctgtctggcgccagcctcacgtccatcgccgcgcacgctttccacggc
ctcacggccttccacctgctggacgtggcggacaacgccttgcagaccctggaggaaacg
gccttcccgtctccggacaagctcgtcacgctcaggctgtctggaaaccccctgacctgt
gactgtcgccttctctggctactccggctgcgccggcgcctggacttcggcaagtccccc
cctgcctgtgcggggccgcagcacgtccagggcaagagcctgagggacttttccgacatc
ctgcccccaggccacttcacctgccaaccggccctgatccgaaagtcagggccgcggtgg
gtggcggccgaggagggtagccaggccatcttctcctgctcgggcgacggagacccggct
cccacggtgtcctggcggcgaccacagggggcctggctggggcaggccgggagagtgagg
gtcctggaggacggcacgctggagatccgctctgtgcagctgcgggaccagggggcctat
gtctgcgttgtaagcaacatcgctggcaatgactctctgaagacctggctggaggtcatc
cctgtcgagccagccaacggcacactcctggaccccaacatcactatgccggggatcccg
ggacccttcttcctggatggcaggggtgtagccatggtgctggctgttggcttcctgccc
ttcctcacctctgtcaccctctgctttggcctcatcgccctctggagcaagggcaaaggc
cgggtcaaacatcacgtgaccttcgattttgtggcacctcggccctccggggataaaaat
gctgggagcaatcgggtcactgccaagctcttctga
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