Sorex fumeus (smoky shrew): 130021316
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Entry
130021316 CDS
T10594
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04068
FoxO signaling pathway
sfum04110
Cell cycle
sfum04120
Ubiquitin mediated proteolysis
sfum04150
mTOR signaling pathway
sfum05169
Epstein-Barr virus infection
sfum05200
Pathways in cancer
sfum05203
Viral carcinogenesis
sfum05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130021316 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
130021316 (SKP2)
04150 mTOR signaling pathway
130021316 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130021316 (SKP2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130021316 (SKP2)
05203 Viral carcinogenesis
130021316 (SKP2)
09162 Cancer: specific types
05222 Small cell lung cancer
130021316 (SKP2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
130021316 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130021316 (SKP2)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
130021316 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
F-box_5
Motif
Other DBs
NCBI-GeneID:
130021316
NCBI-ProteinID:
XP_055968017
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MHRKHLQEIPDQSSNVATSFTWGWDSGKTSELLSGMGVSALEKEEVDSENIPQELLSNLS
PPQKRLKSKGNDKDFVIIRRPKLNRESFSGVSWDSLPDELLLGIFSCLCLPELLKISSVC
KRWYHLAFDESLWQTLDLSGKNLHPDVAGQLLSRGVVAFRCPRSFMDQPLVENFSPFRVQ
HMDLSNSVIEVSALLGLLSQCFKLQNLSLEGLRLSDAVVNNLAQNSNLLRLNLSGCSGFS
EFALKTLLNSCCRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLSRADLST
LVGRCPNLVHLDLSDSVMLKNDCFEEFYHLNYLQHLSLSRCYDIIPETLLELGEIPTLKT
LQVFGIVPDGTLQLLKEALPHLQINGSHFTTIARPTISNTKNQEMWGIKCRLTLQKPSCL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggaaacacctacaggagattcctgaccagagtagcaacgttgcaacgagcttt
acgtggggatgggattctggcaagacttctgaactgttgtcaggcatgggggtctctgct
ctggagaaagaggaggtggacagtgagaacatcccccaagaactgctctcaaacctgagt
cccccacaaaaacggctgaagagcaaagggaatgataaagactttgtgatcattcgcaga
cctaagctaaatcgagagagcttttcaggcgtgtcgtgggactccctcccggacgagctg
ctcctgggaatcttctcctgcctctgtctccccgaactgctgaagatctccagcgtttgc
aagaggtggtatcaccttgcgtttgacgagtctctgtggcagaccttggatctctctggt
aaaaacctgcaccctgacgtggctggtcagctgctgtcccgaggcgtggtggccttccgc
tgccctcgatcatttatggaccagccgctagttgaaaacttcagccccttccgcgtgcag
cacatggacctgtccaactccgtcatcgaagtttctgccctgctcggcctgctgtcccag
tgcttcaagctgcagaatctcagcctggaaggcctgcggctgtcggatgctgtggtcaat
aatctggcacagaactcaaacttgctgcgactaaacctttctgggtgttctggattctct
gagtttgccttgaagacgttgctgaatagctgctgcaggctggacgagctgaacctctcc
tggtgcttcgacttcacggagaagcacgtgcaagtggcagtggcacacgtgtccgagacc
atcacccagctgaacctcagtggctaccggaagaacctctcaagagcagatctctctacc
ttagttggaagatgccctaatcttgtccacctggacttaagtgacagcgtcatgctgaag
aacgactgctttgaggaattttaccacctcaactacctccaacatctgtcactcagccgg
tgctatgatataatacccgaaactttacttgaacttggagaaattcccacactaaaaaca
ctacaagtttttggaatcgtgccggatggtacccttcaactgttaaaggaagcccttcct
cacctccagattaatggctcccatttcaccaccattgccaggccaaccattagcaacaca
aagaatcaggagatgtggggcatcaaatgtcggctgacacttcaaaagcccagttgtcta
tga
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