Sorex fumeus (smoky shrew): 130021326
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Entry
130021326 CDS
T10594
Symbol
TARS1
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130021326 (TARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfum01007
]
130021326 (TARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfum03016
]
130021326 (TARS1)
Enzymes [BR:
sfum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
130021326 (TARS1)
Amino acid related enzymes [BR:
sfum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
130021326 (TARS1)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130021326 (TARS1)
Prokaryotic type
130021326 (TARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
130021326
NCBI-ProteinID:
XP_055968026
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MSAEKSNPPSAKMGGQEKPVDAGEEKRKEGKKKNKEGAGDGGRTELNPWPEYINTRLEMY
NKLKAEHDSILAEKAEKNSKPIKVTLPDGKQVDAESWRTTPYQIACGISQGLADNTVIAK
VNKVVWDLDRPLEEDCTLELLKFEDEEAQAVYWHSSAHIMGEAMERVYGGCLCYGPPIES
GFYYDMYLEDGCVSSNDFSSLETLCKKIIKEKQAFERLEVKKETLLEMFKYNKFKCRILN
EKVNTPTTTVYRCGPLIDLCRGPHVRHTGKIKTLKIHKNSSTYWEGKADMETLQRIYGIS
FPDPKLLKEWEKFQEEAKNRDHRKIGRDQELYFFHELSPGSCFFLPKGAYIYNTLMEFIR
SEYRKRGFQEVVTPNIYNSRLWMTSGHWQHYSDNMFSFEVEKEQFALKPMNCPGHCLMFD
HRPRSWRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCAIEQIEEEIKGCLD
FLRTVYTVFGFSFKLNLSTRPEKFLGDIEVWNRAEKQLENSLNEFGEKWELNPGDGAFYG
PKIDIQIKDAIGRYHQCATIQLDFQLPIRFNLTFVSHDGDDKKRPVIIHRAILGSVERMI
AILTENYGGKWPFWLSPRQVMVVPVGPTCDEYAQKVQQQFHNAQFMVDVDLDPGCTLNKK
IRNAQLAQYNFILVVGEKEKASGTVNIRTRDNKVHGERTIADTIERLSQLKQARNKQAEE
EF
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggagaagagcaaccccccttcagcgaagatgggaggccaggagaagccggta
gatgctggtgaggagaagcgaaaagaaggcaagaagaagaataaagaaggtgcaggggat
ggaggtcgaacagagttgaacccctggcctgaatatattaacactcgtcttgagatgtat
aataaattaaaagcagaacatgattccattctggcagaaaaagcagagaaaaacagcaag
ccaattaaagtgactcttccagatggcaagcaggtggatgcggagtcctggaggaccacg
ccgtatcagattgcctgcgggattagtcaaggcttggctgataacaccgtaattgctaaa
gtgaataaagttgtctgggacctagatcggcctctggaggaagactgtaccttggagctt
ctcaagtttgaggatgaggaagctcaagcagtatattggcactcgagtgctcacataatg
ggtgaagcgatggaaagagtctacggtggatgtttgtgttatgggcccccgatagaaagt
ggattctattatgacatgtaccttgaagacgggtgtgtatccagcaatgatttctcctct
ttggagactctgtgtaagaaaatcattaaagagaagcaagcctttgaaagattggaagtt
aagaaagaaactctgttggaaatgtttaagtataacaaattcaaatgccggatattgaat
gaaaaagtgaatactccaactaccacagtctataggtgtggtcccttgatagatctctgt
cggggtcctcatgtcagacacactggcaaaatcaaaactttaaaaatacacaagaattct
tccacatactgggaaggcaaagcagatatggagacactccagcgcatttatggcatctca
ttcccagaccctaagctcctgaaagagtgggagaagttccaggaggaagctaaaaaccga
gatcacaggaagatcgggagggaccaagaactatacttctttcatgaactcagccctgga
agttgctttttcctgcctaagggagcctatatttataacacactaatggaatttatcagg
agcgagtacaggaagcgagggttccaggaggtggtcaccccgaacatctacaacagccgg
ctgtggatgacgtcgggccactggcagcactacagcgacaacatgttctccttcgaggtg
gagaaggagcagtttgctctgaaacccatgaactgccccggacactgcctaatgtttgat
caccggccacgatcctggcgagagttgccattacgcttggccgacttcggggttctgcac
cggaacgagctgtcaggtgctctcacggggctcacgcgagtgcggcgattccagcaggac
gacgcccacatcttctgtgccatagagcagatcgaagaggaaataaagggctgtttggat
tttctgcgcacggtgtatactgtatttggattctcttttaaactgaacctgtcaacccgc
ccggaaaaattcctgggagacattgaagtgtggaatcgcgcagagaaacaacttgaaaat
agtctgaatgaatttggtgagaagtgggagttaaaccctggcgatggagctttctatggt
ccaaagatcgacatacaaatcaaagatgccatcggccgctaccaccagtgcgcaacgatc
cagctagattttcagctgcccatcaggtttaatcttactttcgtcagccacgatggtgat
gataagaagagaccagtgattattcatagagctatcttgggatccgtggagagaatgatt
gcgatcctcactgaaaactatggtggcaaatggcccttctggctgtcccctcgccaggtc
atggtggttcctgtgggacccacatgtgatgaatatgcccagaaggtccagcaacagttc
cacaatgctcagttcatggtagatgtggatctggacccaggctgtactttgaataagaag
atccggaacgcgcagttagcacagtacaactttatcctagttgttggtgaaaaggagaag
gccagtggcacagtcaacatccgcacgcgagacaataaggtccacggggagcgcaccatt
gctgacaccatcgagaggctctcacagcttaagcaggcccgcaacaagcaggcagaggaa
gagttctaa
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