Sorex fumeus (smoky shrew): 130021334
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Entry
130021334 CDS
T10594
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03420
Nucleotide excision repair
sfum04120
Ubiquitin mediated proteolysis
Brite
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
130021334 (ERCC8)
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
130021334 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130021334
NCBI-ProteinID:
XP_055968039
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All DBs
Position
Unknown
AA seq
396 aa
AA seq
DB search
MLGFLVARQAGLDDPLRLRRAESTRRVLGLELNKDRDVERIHSSGVNTLDIEPVEGRYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADIFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQGHRQEILAVSWSPRYEYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAAESA
NTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSSGENTLVNYGKVCNESRKGLKFTVS
CGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKNVDCCVFQSNFQELYSGSRDCNILA
WVSSLYEPVPDSDETTSKSQLNPAFEDAWSSSDEEG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgctagggttcttggtggcgcgacaagcgggtttggacgacccgcttcgcctgcggagg
gcggagtccacccggagggttttgggcctggagttaaacaaagaccgagatgttgaaagg
atccatagcagcggagtcaacacccttgacattgagcctgttgaggggagatatatgtta
tcaggtggttcggatggtgtgattgtactttatgatcttgagaattccagcagacagccg
tattacacatgtaaagcagtgtgttccgttggcagaagccatcctgatgttcacaagtac
agtgtggagactgtgcagtggtaccctcatgacactggcatgttcacgtcaagctcattt
gataagactctgaaagtgtgggacacaaatactttacaaactgcagatatatttaatttt
gaagaaactgtttatagtcatcatatgtctccagtcgccaccaagcattgtttggtagca
gttggtacccgaggacccaaagtacaactttgtgacttaaagtctggatcctgttcgcac
attctacagggtcacaggcaagaaatactggcggtttcctggtcaccacgttatgaatac
atcttggctactgcaagtgcagacagtagagtcaaattatgggacgtgaggagagcatca
gggtgcttgattacacttgatcagcataacgggaaaaagtcacaagctgctgaatcagca
aacactgctcataatgggaaagttaatggcttatgttttacaagtgatgggcttcacctc
ctcactgtgggcacagataatcgaatgaggctttggaacagttccagtggagaaaacaca
cttgtgaactatggaaaagtttgtaatgagagtcgaaaaggattgaaatttactgtctcc
tgtggctgcagttcagaatttgtttttgtaccatacggtagcaccattgctgtttataca
atttactcaggagaacagataactatgcttaagggacattataaaaacgttgactgctgt
gtgtttcaatctaatttccaggaactttatagtggtagcagagattgcaatattcttgct
tgggtttcatctttatatgagccagtacctgacagtgatgagactacaagcaaatcacaa
ttaaatcctgcgtttgaagatgcctggagcagcagtgatgaggaaggatga
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