Sorex fumeus (smoky shrew): 130021390
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Entry
130021390 CDS
T10594
Symbol
DHX29
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sfum03012
]
130021390 (DHX29)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130021390 (DHX29)
Translation factors [BR:
sfum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130021390 (DHX29)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
DSRM_DHX29
HA2_C
AAA_22
HA2_N
nSTAND3
Cytochrom_D1
ATPase
AAA_16
SF3A3
AAA_19
FtsK_SpoIIIE
Metaviral_G
Motif
Other DBs
NCBI-GeneID:
130021390
NCBI-ProteinID:
XP_055968120
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MGGKNKKHKAPGAAAVRAAVSASRAKAAEAGAAGEAPSKKPVARPPPAAASSTKDPRGKQ
GPKIYSFNSANDSGGPANLDKSILKVVINNKLEQRIIGVINEHKKQNNDKGVISGRLTAK
KLQDLYMALQAFSFKTKDIEDAMTNTLLHGGDLHSALDWLCLNLSDDALPEGFSQEFEEQ
QPKNRPKFQAPQIQATISPPLQPKTKKQEEEKMKVTQNTKKEEKHTEVNMKEWILRYAEQ
QNEEEKNEDSKSLEKEEKFDPNERYLQLASKLLDAKEQAASFKLEKNKQGQKEAQEKIRK
LQREMETLEDHPVFNPAIKISHQQNEKKKPPIATERESSLDFNLFEKSTAATEGEKEKKK
EPHDVRNFDYTARSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVAVGRYWKCRVRVIKSDD
DVLVVCPTILTEDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEEL
NKMETNKPRDLFIAKLLNKLKQQQQQQQKHSENKKENSEDPEESWENLVSDEDFSAPSLE
SEKAEDLEPIRNLFRKLQSTPKYQRLLKERQALPVFKHRNSIVDTLKRHRVVVVAGETGS
GKSTQVPHFLLEDLLLNEWGAGKCNIVCTQPRRISAVSLATRVCEELGCENGPGGKNSLC
GYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLVILK
EILQKRSDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEK
DSEYCQKFLEEEEEITINVTGKAGGIRKYQDYIPVQTGTGVVDLNPFYQKYSNRTQHAIL
YMNPHKINLDLILELLTYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSADRRLSSERY
KVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHE
SSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTQERFEGFMDYSVPEILRVPLEEL
CLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPV
NVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTI
YNAYIGWKKARQEGGYRSEMAYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTASNS
WEGNRTSQTLSFQEIALLKAVLTAGLYDNLGKIMYTKSVDVTEKLACIVETAQGKAQVHP
SSVNRDLQTYGWLLYQEKIRYARVYLRETTLITPFPVLLFGGDIEVQHREHLLSVDGWIY
FQAPVKIAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENT
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcaagaacaagaaacacaaggctcccggagccgcggcggtccgcgccgccgtg
tctgcttccagggccaaagccgcggaagccggggccgcaggagaggccccgagcaagaag
ccggtggccaggccgcctcccgccgcagcctccagcaccaaggatccccggggcaagcaa
ggccccaaaatttatagttttaactctgcaaatgattctggtggtccggcaaatctggat
aaatccattttaaaagtagttattaataataaacttgaacaaagaattattggagtgatc
aatgagcataaaaaacaaaataatgacaagggagtgatttctggaagacttactgccaaa
aaattacaggatttgtatatggctttacaagcattttcatttaagactaaggacattgaa
gatgccatgactaacacactcttacatggaggtgatcttcattctgccttggattggctc
tgtttaaacctttctgatgatgcacttcctgaaggattcagtcaagaatttgaagaacag
caacctaaaaacagaccaaaattccaggctcctcaaattcaagccactatttcacctcca
ctgcaacctaaaaccaaaaaacaggaagaagagaagatgaaggtaacacagaataccaaa
aaggaggaaaaacatacagaagtaaatatgaaggaatggattttgcgatatgctgaacaa
caaaatgaagaagaaaagaatgaggattccaaaagtttagaaaaggaggaaaaatttgac
cctaatgaaaggtacttgcagcttgcttcaaaacttctagatgcaaaagaacaagcagct
tcctttaaactagagaaaaacaagcaaggccaaaaagaagcacaagaaaaaataagaaaa
cttcaaagagaaatggaaactttggaagaccatccagtattcaatccagccataaaaatt
tcacatcaacagaatgaaaaaaaaaagcctcctatagccacagaaagagaaagttctttg
gactttaatttatttgaaaaatctacagctgctactgaaggagagaaagagaaaaaaaaa
gaacctcatgatgtaagaaattttgactatactgctcgaagttggactggaaaatctccc
aaacagtttctgattgattgggtccggaagaatcttcccaagagtccaaatccttccttt
gaaaaagttgcagtaggtagatactggaaatgtagggtaagggtaataaaatctgatgat
gatgtactggttgtatgccctacaatcttaacagaggatggtatgcaagcccagcatttg
ggagctactttagctctgtatcgtctagtcaaaggacagtcagtgcatcagttacttcct
cctacttaccgagatgtttggctggaatggagtgatgcagaaaagaaaaaggaagaatta
aataaaatggaaaccaataaaccacgagatctttttattgctaaacttctgaataaactg
aaacaacagcagcagcagcaacaaaagcattctgaaaataagaaagaaaattctgaagat
cctgaggaatcttgggaaaatttagtatctgatgaggatttttctgccccatctttggaa
tcagaaaaagcagaagacttggaacccattagaaacctctttagaaaattacaaagcaca
cctaagtaccagagacttctgaaggaaaggcaagcgttgcctgtgttcaaacatcgaaat
tccattgttgacacactcaaaaggcaccgggtagtagttgtggcaggtgaaaccgggagt
ggtaaaagtactcaagttccgcactttctcttggaagatttgcttctcaatgagtgggga
gcaggtaaatgtaacatcgtctgcacccagccccgaagaatctcagctgtgagcttggct
acaagagtttgtgaggaactgggctgtgaaaatgggcctggtggaaagaattctttgtgt
ggatatcagatccggatggaatctcgagctagtgaatctacccgtttgctgtattgtaca
acaggagttttgctaaggaaacttcaagaagatggcctcttaactaacgtgtctcatgtt
attgtagatgaggttcacgaaagaagcgtccagtcagactttctgctagttattctgaag
gaaattttacagaaacgatctgatctacatttgattttaatgagtgcaactgtagacagt
gacaagttttctacgtatttcacacactgccccattctcagaatttctggaagaagttat
cctgttgaggttttccatcttgaagatataatagaagaaacaggctttgtcctggagaaa
gactcagaatattgtcaaaaatttctggaggaggaagaagaaataaccattaatgttacg
ggcaaagcagggggaataagaaagtaccaggattacatcccagttcaaactggaacaggt
gtcgttgatttaaatccattttaccagaagtacagcaaccgtactcaacatgccattctc
tacatgaatcctcataaaatcaacctagatctcattttggaacttcttacgtatttagac
agaagtccccagttcagaaatattgaaggagcagtattgatctttttaccaggccttgct
catatccaacagttatatgatctcctatcagctgacagaagattgtcttctgaacgatat
aaagtgatagctctgcattctattctttcaactcaagatcaagctgcagccttcacactt
cctcctccaggagtcaggaagattgtcttagcaacaaatattgcagagacaggtatcact
attccagatgttgtgtttgtaattgatactggacgaacaaaagaaaataagtaccacgaa
agcagtcagatgagttctttggttgagacatttgtcagtaaagcaagtgctctgcagcgc
caggggagagctgggcgggtcagagatggcttctgcttccgaatgtacacccaagaaaga
tttgaaggctttatggactattctgtccctgaaatcttgcgtgtgcctttggaggagctg
tgtcttcatatcatgaaatgcaatcttggttctcctgaagatttcctctccaaagccttg
gatccgcctcagcttcaagtcatcagcaatgcaatgaatttactccgaaaaattggagct
tgtgaactaaatgaaccaaaactgactcctttgggccaacaccttgcagctttgcctgtg
aatgtgaaaattggaaagatgcttatttttggtgccatatttggatgccttgacccagtg
gcaacgctagctgcagtcatgacagagaagtctccttttaccacaccaattggtcggaaa
gatgaagcagatcttgcaaaatcagctttggccatggcagattcagaccacctgacgatc
tacaatgcatacataggatggaagaaagccaggcaagaaggaggctatcgttctgaaatg
gcatattgccggaggaattttcttaacaggacatcactattaacacttgaggatgtaaaa
caggagctaataaagttggttaaggctgcaggattttcatcatctacagcttctaacagt
tgggaaggaaacagaacctcacaaaccctatccttccaagaaattgcccttcttaaagct
gtactgactgctggcctgtatgacaatttagggaagataatgtatacaaaatcagttgat
gtgacagaaaaattggcttgcattgtggagacagcccaaggcaaagcacaagtacatcca
tcctcagtaaatcgagatttgcagacttatggatggctcttataccaagagaagataaga
tatgcccgggtgtatttgagagaaacaacactaataactccttttccagttttacttttt
ggtggtgatatagaagttcaacatagggaacatcttctgtctgttgatggttggatctat
tttcaggcccctgtgaagatcgcagtcattttcaagcagctaagagttctcattgattct
gttttaagaaaaaagcttgaaaatcctaagatgtcccttgaaaatgacaaaattctacag
atcatcacagaattgataaaaacagagaatacttga
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