Sorex fumeus (smoky shrew): 130021447
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Entry
130021447 CDS
T10594
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130021447 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130021447 (NIPBL)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130021447 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
130021447
NCBI-ProteinID:
XP_055968200
LinkDB
All DBs
Position
Unknown
AA seq
2801 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNARIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQTVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQMQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFSLRSPQPVCSPAGSDGTPKGSRSTLILPSQ
PLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQSEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDINRPLNAAQCL
SQQEQTAFLPANQVPVLQQNTSIATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASVTQDSDSIKKPEETKQCNDAPISVLQEDIIGNLKSTPENHPETP
KKKSDSELSKNEMKQNESRLADSKPIENRLETKSSENTLETKTEAQTEESKQNESKTTES
KQNETITAEPKQNENRLSDAKLNDKQNNGKSETVKSRPETPKQKGENRPETPKQKSDGRP
ETPKQKGDGRPETPKQKGESRPETPKQKNDGRPETPKHRHENRRDSVKPSTEKKPEVSKH
KQDIKSDPPRLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDKNESERHRGDQSRVRR
PETLRSSSRNDHGVKSDGSKSEKLERKHRHESGDSREKPSSGEQKSRPDSPRVKQGDSNK
SRLDKSGFKSPNSKDDKRTESNKSKVDSNKAHPDNKAEFPSYLLGGRSGALKNFVIPKIK
RDKDGNITQETKKMEMKGEHKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDRED
KSRSSLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEK
PKYAEISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSHTHEGRRSSGG
GRYRNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFT
ASIENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTV
KVLNILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNM
PKAVYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCSTHKQRVI
VMLYNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFS
RYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDMDGEPMYIQMVTALVLQLIQCVVH
LPSSEKDSNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFE
NFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKD
AVTSKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRD
TTLETEKAMKSQKDEESSEGTHHAKEVETTGQIMHRAENRKKFLRSIIKTTPSQFSTLKM
NSDTVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVD
PSILARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGIS
VRKRVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDK
EAMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHIL
KYEESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMV
ICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNF
KFVWACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKG
NSKVNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNNILSDK
NSSVNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYL
KQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLV
EIDKKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNR
QHRRAFLISLLNLFDDTAKTEVNMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSN
LLQSFKESMVKDKRKERKSSPNKENESSESEEEVVRPRKSRKRVDSDSDSDSEDDINSVM
KCLPENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRK
TGVHFHPKQTLDFLRSDMASSKITEDVKRSIVKQYLDFKLLMEHLDPDEEEEEGEVSAST
NARNKAITSLLGGGSPKNNAAAETEDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNE
SVDVMDVIAICCPKYKDRPQIARVVQKTSSGFSVQWMAGSYSGSWTEAKRRDGRKLVPWV
DTIKESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8406 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccatcactactcttgcggggattgctagtctcaca
gacctcctgaaccagctgcctcttccatcccctttacctgctacaactacaaagagcctt
ctctttaatgcacgaatagcagaagaagtaaactgccttttggcctgtagggatgataat
ttggtttcacaacttgtccatagcctcaaccaggtatcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggcgacataccagtcttgttgcagaccgtcctg
gcaaggagtcctaatgttttcagggagaaaagtatgcagaacagatatgtacaaagtgga
atgatgatgtctcagtataagctttctcagaattccatgcacagtagtcctgcatcttcc
aattaccaacaaaccactatctcacacagtccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
caaagccctgcaggatacatgccatattcccatccttcaagttatacaacacatccacag
atgcagcaagcctcagtatcaagtcccattgttgcaggtggtttgagaaacatccatgat
aataaagtttctggtcccttgtctggcaattcagctaatcatcatgctgataatcctaga
catggctcaagtgatgactacctacacatggtgcacaggctaagtagtgacgatggagat
tcttcaacaatgaggaatgctgcatctttttctttgagatctccacaaccggtatgctcc
cctgctggaagtgatggaacacctaaaggatcaagatcaactttaatccttccatctcaa
cctctaccttgttcatcacctcgagatgttccaccagacatcttgttggattctccagaa
agaaaacaaaagaaacaaaagaaaatgaaattaggcaaggatgaaaaagaccagagtgag
aaagctgcaatgtatgatattattagttcgccatccaaggactctacaaaacttacatta
agactttctcgtgtaaggtcttcagatatggaccagcaagaggatatgctctctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtacccaggacagact
tcaaaaacacccattactccacaggatataaatcgcccattaaatgctgcccagtgtttg
tcgcagcaagaacaaacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcaattgctaccaaacaaccccagacttctgtggtacagaatcagcaacaggtatca
caacagggacctatatatgatgaagtggaattggatgcattggctgaaattgagcgaata
gaaagagaatcagctattgaaagggaacgcttttcaaaagaagttcaagataaagataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttcaacgggaaatgggtcaaggccagcattaatg
gttagtattgatcttcatcaggcaggaagagtggactctcaggcttctgtaactcaggat
tcagactccataaaaaagcctgaagaaaccaaacaatgtaatgatgcacctatatctgtt
cttcaggaagatattattggaaatcttaaatccacaccagaaaaccatcctgagactcct
aaaaaaaagtctgattctgagctttcaaagaatgaaatgaagcaaaatgaaagtagattg
gcagactctaaaccaatcgaaaatagattggagacaaaatcaagtgaaaatacactagaa
actaaaactgaagcacagacagaagaatctaaacagaatgagagcaaaacaactgaatcc
aaacagaatgagaccatcactgccgagcctaaacaaaatgaaaacagactctctgatgca
aaactaaatgacaaacaaaataatggcaaatcagaaacagtaaagtcaagacctgaaacc
ccaaagcaaaagggtgaaaaccgacctgaaactccaaaacaaaagagtgatggacgtcct
gaaaccccaaaacaaaagggtgatggacgacctgaaactccaaagcaaaaaggtgagagt
cgacctgaaactccaaagcaaaaaaatgatggtagacctgaaacaccaaaacataggcat
gaaaataggagggattctgtaaagccatcaacagagaagaaacctgaagtgtctaaacat
aaacaggatattaaatctgatccacctcggttaaaatcagaacgggctgaagccttaaag
cagagacctgatgggcgatctgtttctgagtcattaagacgtgaccatgataataaacaa
aaatcagatgacaagaatgaatcagaacgacatcgaggggatcagtctagggttcgaaga
ccagaaacattgagatcctctagtagaaatgatcatggcgtgaaatctgatggttcaaaa
tctgaaaaactagaaagaaaacacaggcatgaatcaggggactcacgggaaaaaccatct
tctggggagcaaaaatcaagacctgacagtcctcgtgttaaacaaggagattctaataaa
tcaagacttgacaaatctggttttaaatcaccaaatagtaaagatgacaaaaggacagag
agtaacaagagcaaagtagatagtaataaagcacaccctgacaataaggcagaatttcca
agttacttacttggaggcagatctggtgcattgaaaaattttgtcattccaaaaataaag
agggataaagatggcaatattactcaggagacaaagaaaatggaaatgaaaggagagcat
aaagataaagtagaaaaaatgggattagttgaagatctaaataaaggggctaagcctgta
gttgtcctgcagaaactgtctttggatgatgttcagaaacttattaaagatagagaggat
aagtcaagaagttcccttaaatccatcaagaacaaaccatcaaagtctaataaaggtagt
atagatcaatcagtgttaaaagaattgccccctgaactcctggcagaaatcgaatccacc
atgccactttgtgaacgtgtgaaaatgaataagcgcaagcgtagcacagttaatgaaaag
cccaaatatgctgaaatcagttcagatgaagataatgatagtgatgaagcttttgaatct
tctaggaaacgacataaaaaagatgatgataaagcttgggaatatgaagaacgtgacaga
agaagctccggggatcataggagaagtcacactcatgaaggaagaaggagttcaggtggt
ggtcgttatcgaaaccgaagcccatctgattctgacatggaagattattctcctcctccc
agccttagtgaggttgctagaaaaatgaagaaaaaagaaaaacagaagaagaggaaagct
tatgaaccaaaactaacacccgaagaaatgatggattcttcaacttttaagagattcaca
gcctccatagagaatattttagataatttagaagatatggattttactgcatttggtgat
gatgatgaaattcctcaggaactgctcttaggaaaacatcagcttaatgaacttggcagt
gaatctgctaaaattaaagcaatgggtataatggataagctttcaactgacaaaactgtg
aaagttttaaatatcttggagaagaatattcaggatggttctaagctttccaccctgctg
aatcataataatgatactgaagaggaagaaagattatggagagaccttattatggagaga
gttacaaagtcagcagatgcctgtcttacaactatcaacattatgacatcccctaatatg
ccaaaagctgtgtatattgaggatgtaattgaaagagttatacagtacactaaatttcat
ttgcagaatacactttatcctcagtatgatcctgtttacagattagatcctcatggagga
ggtttattaagttcgaaagcaaaacgagctaaatgttctacacataagcagagagtaata
gtaatgctttacaataaagtttgtgacattgttagcagcttatctgaattattagaaata
caacttcttacagatacaacaattcttcaggtatcatcaatgggaataacaccatttttt
gtggaaaatgttagtgaactacaattgtgtgccattaagttagtcactgcggtgttctca
agatatgaaaaacataggcaattaattttagaagaaatttttacttcccttgcaagatta
ccaaccagcaagagaagtttaagaaacttcaggttaaacagtagtgatatggatggagag
cctatgtatattcaaatggtcactgcacttgttttgcaacttattcagtgtgtagtacat
ttaccatcatcagagaaggactctaattcagaagaggactcaaataaaaaagttgaccaa
gatgttgtcattaccaactcttatgaaacagcaatgcgaacagcacaaaacttcctttct
atcttcctgaaaaaatgtggtagtaaacaaggtgaagaagattacagaccactatttgaa
aattttgttcaggaccttctttcaacagtcaataagcctgaatggccagctgctgaacta
ctccttagtttgttagggagactgttggtgcaccagttcagtaacaagtcaacagagatg
gctttaagagtagcatctcttgattaccttggaactgttgctgcacgactgaggaaagat
gccgttacaagcaaaatggatcaagggtctatagaacgaattttaaaacaggtttcagga
ggagaagatgaaatccagcagttgcaaaaagcattgcttgattatttggatgaaaacact
gaaactgatccttcattagtgttttctcgtaaattttatatagcccagtggtttcgtgac
acaacactggagacagaaaaggcaatgaaatcacaaaaagatgaagagtcatctgaagga
acacatcatgcaaaggaagttgagacaaccggtcaaattatgcatcgagctgaaaatagg
aaaaagtttcttagaagtattatcaaaaccacaccttctcagttcagcactttaaagatg
aactctgatactgtggactatgatgatgcttgtttgattgttcgatacttggcctctatg
aggcctttcgcccagagttttgatatttatttgacacagatcctacgagttcttggtgaa
aatgctattgccgtcagaacaaaagccatgaagtgtttatctgaggttgttgctgtagac
cccagtattctagcaaggctggatatgcagcgaggagttcatgggcgattgatggataac
tccactagtgtcagagaagcagcagtagaattacttggtcgatttgtcctttgtcgacct
cagcttgctgagcagtattatgatatgctgattgaaagaatattggatactggtatcagt
gtcaggaaaagggtaataaagattctaagagacatctgtattgaacaaccaacatttcca
aaaattacagaaatgtgtgtaaaaatgattcgcagagttaatgatgaagagggcattaag
aaattagtaaatgaaacattccagaaactctggtttaccccaactccacacaatgacaaa
gaggcaatgacaaggaagattttaaacatcactgatgtggttgcagcttgtagagatact
ggctatgactggtttgagcaactccttcaaaatttgttgaagtccgaagaggattcctca
tataaacctgtgaagaaagcttgtactcaacttgttgataacctagttgagcacattctt
aaatatgaggaatctctagctgactctgacaataaaggtgtgaattctggaagattggta
gcttgcataaccactttgttcttattcagcaaaataagaccccaactcatggttaaacat
gctatgactatgcaaccataccttaccactaaatgtagcacacaaaatgatttcatggtt
atctgcaatgttgcaaaaatcctagagctggttgtaccattaatggagcatccaagtgaa
actttccttgccactattgaagaagatctaatgaaacttatcatcaaatatggcatgact
gtagtacagcattgtgtgagctgtcttggggcagttgtaaataaagtgacacaaaatttt
aaatttgtgtgggcctgttttaatagatattatggtgccatctcaaaattaaaaagtcaa
caccaagaggacccaaataacacttcacttctaacaaacaaaccagcacttcttagatcc
ctttttactgttggagcactatgtcgtcattttgattttgatctagaagactttaaaggc
aatagtaaggttaacataaaggataaagttcttgaactattgatgtattttacaaaacat
tcagacgaagaggtgcaaacaaaggccatcattggtctaggatttgcctttattcaacat
ccaagtctaatgtttgagcaagaggtgaaaaatctgtataataatattttatctgataag
aactcttcagtgaatttaaaaatacaagtgttaaaaaacctccagacctacctacaagaa
gaggatacccgtatgcagcaggcagatagagactggaagaaagttgcaaaacaagaagac
ctaaaagagatgggtgatgtttcctcagggatgagtagttccatcatgcagctttacctc
aaacaggtgcttgaggcattttttcacacccaatcaagtgtacgccactttgctctaaat
gtcattgcattgactctaaatcaaggtctaattcatccagttcagtgtgtaccatattta
attgctatgggcacagatccggaaccagctatgaggaacaaggccgatcagcagcttgtg
gaaatagacaaaaaatatgctggattcattcatatgaaagcagtggctggtatgaagatg
tcttaccaggtacaacaggcaatcaacacgtgcctaaaagatcctgtaagaggtttcaga
caagatgagtcctctagtgctttgtgttcacacctttactccatgatccgtggaaaccgc
caacacagacgagcctttttaatttctttactcaacctctttgatgacacagcaaaaact
gaagtgaacatgctcttgtatatagcagacaatctagcctgttttccataccagacacag
gaagagccgttgtttataatgcatcatatagacattacactctcagtttctggtagcaac
ctactacagtcattcaaggagtcaatggtaaaagacaaaaggaaagagagaaagtcatct
ccaaataaggaaaatgaatcaagtgagagtgaagaagaagttgtcaggccgcggaagtca
cggaaacgagtagattctgattctgattctgattcagaagatgatataaattcagtgatg
aaatgtttgccagaaaattcagctcctttaattgaatttgcaaatgtctcccagggtatt
ttattgcttttaatgttaaagcaacatttaaaaaatctctgtggattttctgatagtaaa
attcagaaatactctccatctgaatctgccaaagtatatgataaagctataaatcgaaaa
acaggagttcattttcatccaaaacaaacactggacttcctgcggagtgatatggctagt
tccaaaatcactgaagatgtgaagaggagtatagtaaaacagtatctagattttaagctt
cttatggagcatctggaccctgatgaagaagaggaagaaggggaggtgtcagctagcaca
aatgcccggaataaagcaattacctcgctgcttggcggaggcagccctaaaaataatgca
gcagcagaaacagaagatgatgaaagtgatggggaggatagaggaggaggcacttcaggg
tcattgagaaggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaa
agtgttgacgtcatggatgtcatcgctatttgctgtccaaagtacaaagatcgaccacaa
attgcaagagtagtacagaaaaccagcagtggcttcagtgttcagtggatggcaggctcc
tacagtggctcctggactgaggctaagcgccgtgatggccgcaaactggtgccttgggta
gacactattaaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataag
ctgactaataaagttgttcagactttacgatccctgtatgccgccaaggatgggacttcc
agctaa
DBGET
integrated database retrieval system
