Sorex fumeus (smoky shrew): 130021500 Help Entry 130021500         CDS       T10594                                  Symbol GRIA1 Name (RefSeq) glutamate receptor 1 isoform X1   KO K05197   glutamate receptor 1 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04024   cAMP signaling pathway sfum04080   Neuroactive ligand-receptor interaction sfum04082   Neuroactive ligand signaling sfum04713   Circadian entrainment sfum04720   Long-term potentiation sfum04723   Retrograde endocannabinoid signaling sfum04724   Glutamatergic synapse sfum04728   Dopaminergic synapse sfum04730   Long-term depression sfum05014   Amyotrophic lateral sclerosis sfum05016   Huntington disease sfum05017   Spinocerebellar ataxia sfum05022   Pathways of neurodegeneration - multiple diseases sfum05031   Amphetamine addiction sfum05033   Nicotine addiction Brite KEGG Orthology (KO) [BR:sfum00001]  09130 Environmental Information Processing   09132 Signal transduction    04024 cAMP signaling pathway     130021500 (GRIA1)   09133 Signaling molecules and interaction    04080 Neuroactive ligand-receptor interaction     130021500 (GRIA1)    04082 Neuroactive ligand signaling     130021500 (GRIA1)  09150 Organismal Systems   09156 Nervous system    04724 Glutamatergic synapse     130021500 (GRIA1)    04728 Dopaminergic synapse     130021500 (GRIA1)    04720 Long-term potentiation     130021500 (GRIA1)    04730 Long-term depression     130021500 (GRIA1)    04723 Retrograde endocannabinoid signaling     130021500 (GRIA1)   09159 Environmental adaptation    04713 Circadian entrainment     130021500 (GRIA1)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     130021500 (GRIA1)    05016 Huntington disease     130021500 (GRIA1)    05017 Spinocerebellar ataxia     130021500 (GRIA1)    05022 Pathways of neurodegeneration - multiple diseases     130021500 (GRIA1)   09165 Substance dependence    05031 Amphetamine addiction     130021500 (GRIA1)    05033 Nicotine addiction     130021500 (GRIA1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04040 Ion channels [BR:sfum04040]     130021500 (GRIA1) Ion channels [BR:sfum04040]  Ligand-gated channels   Glutamate (ionotropic)    130021500 (GRIA1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3 DUF659 Motif Other DBs NCBI-GeneID:  130021500 NCBI-ProteinID:  XP_055968225 LinkDB All DBs Position Unknown AA seq 902 aa AA seqDB search MQCLLAFCTGLLGAVVGANFPNNIQIGGLFPSQQSQEHAAFRFALSQLSEPPKLLPQIDI VNISDSFEMTYRFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQF VLQLRPELHGALISTLDHYKWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNVLTTT EEGYRTLFQDLEKKKERLVVVDCESERLSAILGQIVKMEKNGIGYHYILANLGFMDMDLS RFKESGANVTGFQLVNYTDTVPARIMQQWKSSDARDHTRVDWKRPKYTSALTYDGVKVMA EAFQSLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRR TNYTLHVIEMRHDGVRKIGYWNEDDKFVPAATDAQAGGDNSSVQNRTYIVTTILEDPYVM LKKNANQFEGNDRYEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGEL VYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWM CIVFAYIGVSVVLFLVSRFSPYEWHNEELEEGREPAAGDQSNEFGIFNSLWFSLGAFMQQ GCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAY GTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLEST MNEYIEQRRPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWW YDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYKSRSESKRMKG FCLIPQQPLSETIRTSTLPRNSGSGAGGGENGRVGSHDFPKSVPSVPCMSHTSGMPLGAT GL NT seq 2709 nt NT seq  +upstreamnt  +downstreamnt atgcagtgcctgctggccttctgcacgggcttgctgggcgccgtggtgggggccaatttc cccaacaacatccagatcggggggctgttccccagccagcagtcccaggagcatgcggcc ttcagattcgccctctcgcagctctccgagccccccaagctgctcccccagatcgacatc gtgaacatcagcgacagcttcgagatgacctacagattctgctcgcagttctccaagggc gtgtacgccatcttcggcttctacgagcgccgcacggtgaacatgctgacgtccttctgc ggggccctgcacgtgtgcttcatcacgcccagcttccccgtggacacgtccaaccagttt gtgctgcagctgcgcccggagctgcacggggccctcatcagcaccctggaccactacaag tggcagaagttcgtctacatctacgacgccgaccgaggcctctccgtcctgcagaaggtc ctggacacggccgccgagaagaactggcaggtgacggccgtgaacgtcctgacgaccacg gaggagggctaccggacgctcttccaggacctggagaagaagaaggagcggctggtggtg gtcgactgcgagtccgagcgcctcagtgccatcctgggccagatcgtgaagatggagaag aacggtatcggctaccactacatcctcgccaacctgggcttcatggacatggacctgagc aggttcaaggaaagtggggccaacgtgacgggcttccagctggtcaactacacggacacg gtgcctgcccgcatcatgcagcaatggaagagcagtgatgcccgcgaccacacgcgtgtg gactggaagaggcccaagtatacgtccgcgctgacctacgacggggtgaaggtgatggcc gaggccttccagagcctgcgccggcagcggatagacatctcccggaggggcaacgcaggg gactgcctggccaaccccgccgtgccctggggccagggcatcgacatccagagggcactg cagcaggtgcggttcgaggggctgacggggaacgtgcagttcaatgagaagggccggcgc accaactacaccctgcatgtcatcgagatgcggcacgacggggtccggaagatcggctac tggaacgaggacgacaagttcgtccctgcagccaccgatgcccaggccggcggggacaac tcgagcgtccagaacaggacgtacatcgtgaccaccatcctagaggacccttacgtcatg ctcaagaagaacgccaaccagttcgagggcaacgaccgctacgagggctactgcgtggag ctggcggccgagatcgccaagcacgtgggctactcctaccggctggagatcgtcagcgac ggcaagtacggcgcccgcgacccggacaccaaggcctggaacggcatggtgggcgagctg gtgtacgggagggcggacgtggcggtggccccgctgaccatcacgctggtgcgcgaggag gtgatcgacttctccaagcccttcatgagcttgggcatctccatcatgatcaagaagccg cagaagtccaagcccggcgtcttctccttcctggacccgctggcctacgagatctggatg tgcatcgtcttcgcctacatcggcgtgagcgtggtcctcttcctggtcagccgcttcagc ccctacgagtggcacaacgaggagctggaggagggccgggagcccgcggccggcgaccag tccaacgagttcgggatcttcaacagcctgtggttctcgctgggcgccttcatgcagcag ggctgcgacatctcccccaggtccctgtctggtcgcatcgtgggcggcgtctggtggttc ttcaccctcatcatcatcagctcgtacacggccaacctggcggccttcctgacagtggag cgcatggtgtcccccatcgagagcgccgaggacctggccaagcagacggagatcgcctac ggcacgctggaggccggctccaccaaggagttcttccggaggtccaagatcgccgtgttc gagaagatgtggacgtacatgaagtcggccgagccgtccgtgttcgtgcgcaccacagag gagggcatgatccgggtgcgcaagtccaagggcaagtacgcgtacctgctggagtccacc atgaacgagtacatcgagcagcgccggccctgcgacaccatgaaggtgggcggcaacctg gactccaagggctacggcatcgccacgcccaagggctcggccctcagaaacccagtaaac ctggcagtgttaaaactgaacgagcaggggctactggacaaattgaaaaacaaatggtgg tacgacaagggcgagtgcggcagcgggggcggtgattccaaggacaagaccagcgccctg agcctcagcaacgtggccggcgtcttctacatcctcatcgggggcctcggcctggccatg ctggtcgccctggtggagttctgctacaaatcccgcagcgagtccaagcgcatgaagggc ttctgcttgatcccgcagcagcccctcagcgagaccatccggacgtccacgctcccgcgg aacagcggctcaggggccggcggcggcgagaacggccgcgtgggcagccacgacttcccc aagtccgtgccctccgtgccctgcatgagccacacttcagggatgcccttgggggccacg gggctgtag

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