Sorex fumeus (smoky shrew): 130021507
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Entry
130021507 CDS
T10594
Symbol
TRIM58
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM58
KO
K12027
tripartite motif-containing protein 58 [EC:
2.3.2.27
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130021507 (TRIM58)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130021507 (TRIM58)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130021507 (TRIM58)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
ATG14
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_10
Sina_RING
zf-rbx1
zf-Nse
DUF8512
Motif
Other DBs
NCBI-GeneID:
130021507
NCBI-ProteinID:
XP_055968238
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MASGAPGERLREEARCPVCLDFLQEPVSVDCGHSFCLRCISEFCERAEPGPSGRFSCPQC
RAPFARAGFRPNRQLAGLVERVRQLALGAGPAGAGRCARHGEELGRFCHDDQAPLCWVCD
AEPEHRGHRTAPLQEAARVHQAKLQMALEVVRKDMQEALAQETNVGKKTIIWKEKVETQR
QRFRLEFEKYRGFLAQEEQLQLRRLEEEERTTLSRLRDSKGRLGQRGRALRELAEELEER
SQRPALGLLEGVQEVLTRSHSVPRPEPETITMELRTMCRIPGMREMLKKFQVDVKLDPIT
AHPSLLLTADLRRVQDGELWRDVPSNPERFDTWPCVLGLQSFSSGRHYWEVAVGERAEWG
LGVCQDSVLRKGETTPSPENGVWAMWLLKGNEYMVLASPSVPLLHLERPRRIGIFLDYEA
GEVSFYNVTTGAYIYTFNQLFSGLLRPYFFICDTTPLILPPLSEAETQTRAPASRAALDP
ARHVQEESS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggggcgcccggggagcggctgcgggaggaggcgcggtgccccgtgtgcctg
gacttcctgcaggagccggtgagcgtggactgcggccacagcttctgcctgcgctgcatc
tccgagttctgcgagcgcgccgagcccgggcccagcggccgcttctcctgcccgcagtgc
cgcgcgcccttcgcgcgcgccgggttccggcccaaccggcagctggcggggctggtggag
cgcgtgcggcagctggcgctgggcgcgggcccggcgggcgcggggcgctgcgcccgccac
ggcgaggagctcggccgcttctgccacgacgaccaggcgcccctgtgctgggtgtgcgac
gcggagcccgagcaccggggccaccgcaccgcgccgctgcaggaggcggcccgcgtccac
caggcgaagctgcagatggccttggaagtggtgaggaaagatatgcaggaggccttggct
caggagaccaacgtgggcaagaaaaccatcatctggaaggagaaggtggagacgcagagg
cagcgcttccggctggagtttgagaagtaccgtggcttcctggcgcaggaggagcagctg
cagctgcggaggctggaggaggaggagcgcaccacactaagccgcctgcgggacagcaag
gggcgcctggggcagcggggtcgggcgctgcgggagctggccgaggagctggaggagcgc
agccagcgccctgccctcggcttgctggagggcgtgcaggaggtgctgacccgaagccac
agtgtcccgcggccagagccggagaccatcaccatggagctgaggaccatgtgtcgcatc
cctggcatgcgggagatgctgaagaagtttcaagtcgatgtcaagttggaccccatcacg
gcgcaccccagcctgctgctgacggctgacctgcgcagagtgcaggacggggagctgtgg
agagacgtccccagcaaccccgagcgctttgacacctggccctgcgtcctgggcctgcag
agcttctcgtcagggaggcactactgggaggtggcggtgggcgagcgggcagagtgggga
ctgggagtctgtcaggactcagtgctgaggaagggggagaccacaccctctcccgagaac
ggggtctgggccatgtggctgctgaaagggaacgagtacatggtcctggcctccccctcc
gtgcccctgctgcacctggagcggccgcgccgcatcgggatcttcctggactacgaagcc
ggcgaggtctccttctacaacgtcaccaccggcgcttacatctacacgttcaaccagctc
ttctcgggccttctccggccctacttcttcatctgtgacacgacgcctctcatcttgccc
cctctgtcagaggctgagacacaaactcgggcaccggcctccagggctgctcttgaccca
gcccgtcacgtgcaggaagaatcttcctga
DBGET
integrated database retrieval system
