Sorex fumeus (smoky shrew): 130021655
Help
Entry
130021655 CDS
T10594
Symbol
BDP1
Name
(RefSeq) transcription factor TFIIIB component B'' homolog
KO
K15198
transcription factor TFIIIB component B''
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sfum03021
]
130021655 (BDP1)
Transcription machinery [BR:
sfum03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
130021655 (BDP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
130021655
NCBI-ProteinID:
XP_055968390
LinkDB
All DBs
Position
Unknown
AA seq
2634 aa
AA seq
DB search
MFRRARLSVKPNVRPSVGARGSGAAAPQRGPDAARPPEPAAPAAAPRPAEPAEEAPADFG
GAEPPEKAPRSGDEKTDGENDVVEESSKSSSIVSQRRKRISSTSSVVKPNVSVPSEPEPL
SAVNSEVPTPSPVPTAEKQPCSDRYRIYKARKLREMLKEELRKEKKQWKNKYATNESQRP
PDRSKMTMRDFIYYLPDNNPMTSSLEQEKRTEKSLTTVQSKEQENKNPPDTEDNEDIEEE
ADDGPLLVPRVKVAEDGSIILDEESLTVEVLRTKGPCVVEENDPIFERGSTTTYSSFRKN
YYSKPWSNKETDMFFLAISMVGTDFSMIGQLFPHRARIEIKNKFKREEKTNGWRIDKAFQ
EKRPFDFDFFAHLLQKVLAEEEKRKQKSVKSQPLKEKKSSKPQKNVKVKKVTSEGVSDDL
DESVGNKVSDTEGLQKDAQTIEEQSSASSEQDLEQGAPEADLNQNKRRKKNQEESGKQAV
KNHSENTTAQPAPSEEEKQNDKCQPLRPEINEDDGNKEQVLFCIQNSEDISFSSEKVEKR
TDPILSLSQQDAMSVRGETLESHAANSPPSDVNVEDLCELNVAEGSSTEERTVVVESKTL
EADQEENLKPKVRGRLQRPKPNLSRAVGKKPVLTQSKTLEESKSLHPETSVEKSNMEKDE
VNTVDISGMENTEVKNADVETVLNSSEKNCPQEDDEPKVFRPARPLRGRLQRPKPNLSKA
AERKETPASQDKNGAENVEKSEIQPCVDRNTPKQVEDQSCKNFECENVMSQPEKNDPSQN
IQLDDHEAPNECLSNIQEDSTSNVFKQVPVLKTRFQKPKPNIGRGTRKREMFSKEEVAEE
ILSSEKMTAALREIARLEISPREEVPVEVDTTQEINSSLKESERRDISPKEKIAETVDTT
EEMETDLKETGVEISSSQTVAEVTEVIEEEELGFKETEVEISPSESVPEVTEITEEKESH
LKETGVEISQREMIPEMTDVIEEKESDLKEIVEEITLCQSIGEVIEISEEKETDLKKTEE
EITPYQRIAEMIETTDKKESDLKETGEEIILCQRIAEVIGITEEKETDLKETGEETTPCQ
RIAEMIEITEEKESDLKETGEEITPYQRIEMIGITEEKESDLKETGEMITPYQTIEMIEI
TEENESDLEETEDEIIPYQSISEMIEFSEERETDMKEIEEITPFQIAEMIEITEERETDI
KETEEITPCQRIAEEIEIAEETETNLEETTQKEIPQNERVLNEVNTFGEVETDLRATGKE
ISLTEKAPVGISAIEEREVFMKETGKGDMSLLEKIPGNGTGSGERKADFKESQEDIFLMK
SRSEEIGAAEEMVADLKTMRPVDVSLRENRTEETGTLRQTETDLTQDKCGDYSASPSLNA
SNISSELLPMVQTSVEVKTSSEMEMSSSVHSLQILDCDIIEDQGTQPTDTQEQFSDVNIS
TSLPEEQKPAEVKPAPFVRSRFKRPKPNLARAALKRETLAAKTPVLGKKLEPAKMEGAVL
AQNTVLSDQQDVSPLTTSGEKDESYPREGAAGALPCVQSEQDPLPTSSGDSKEEAESTPA
REEDVAISLGTQSTSSLQQEMKESTTQSAVPVRGRLQRPRPNIRKAGQRQVASGVEARDG
TLQDQRTTLQKEEAEKKLLDAANSQLGIEIEVVSSKISECRMNDILDEQKSHEHKATVPS
PAPLVRRQFQKAKPNLGRAHGKREERCLGKDRAGQSQAKEPEENWLQQGKSDTQLLEKDK
SELKTSHEISARKDCIVGSAEPGLMKKGAQSEVRPSASIGEKSIGDNSMSSIIKEQHLSK
PPSCPQLLKEPSYSKTALDRRTASSSISEHETDHSERRTHRKIKSNAARGRGSKRVRSKA
PKKEPRTSKAMLVTLRASQEEEDDDDDLDLDYEEESYHLAPEEVNKAPVFVPIGLRSPEP
VAAQIEETMEELEITMDVPDVGCITVVEQELLNVEVNPQEVKQDVSENMLTVEITTSEHT
QNEAGPSEGNTEAAVALLTVGDVLLQSEISMEQGQVGICVLPDVQSRDKNHIPFSPDHVN
HSIVHECQDLSSPVTTNSLPSLKENKIVLDGQSTTEKIELMEEAKEEILSNSNTASEVTN
NLKMRRRFAKPKVNLKKILGTSSVGAHSNLSGTKGEEEEIHRETEKSASDAAELEENLGA
VAATENWEQSKLVDASGVQGPPEHEDLTERNEDQEAEHQQAQILSVAPVVSADPSSSPHT
LGSSEALDESPMETPLAPGSEGCNVLTLHVPECVSTSIPEIQEENVIGSQDLTVNVIAAD
GQQDNEDEHTFILTLVEIPANEVEEFADTTAQVMPNPLLPAPILLKSVNNEETGDLSMNF
PVTSISQDAMCLSDSGRESEKPPANLDVSRKRFHCSLDESDSVPPAKKSSFDSVDNCEKY
SSEVCSKELMNVFEETGVSHKEQNDVHTSGSIPTTPKSQKRQLEPSTPQSIGSRSLDKII
DRHLEKTPPLLPKDKMVVSDKEERTCSASKSEQMHNRPSSSKTSLSRPGRRPLGFLSLIC
SKSSLESDEPTQFHKKKRPKPLIPVSRQNLKRSNSSSERQKTNTESSDVLPSSSGVSPAS
ENLSSSAAASQVSCDHPLLEEKCKSGSNQTPGEEPTTVSEYFFGDIFIEVDETQ
NT seq
7905 nt
NT seq
+upstream
nt +downstream
nt
atgttccgccgggcgcgcctgagcgtgaagccgaatgtcaggcctagtgtgggcgctaga
ggctcgggcgccgccgccccgcagcgtggacccgacgcagctcggcccccggagcccgcc
gcgcccgctgctgccccgcggcccgccgagcccgcggaggaggcgccggccgatttcggg
ggagcggagcccccggagaaggctcccaggagcggtgatgaaaagaccgatggtgagaat
gatgttgttgaagaatccagtaaatcttcctctattgtttcacagagaagaaagcgaata
tcaagtacttctagtgtggttaagcctaatgtcagtgttccttcagaacctgagcccttg
tctgcagttaactcagaagttcctacaccaagccctgttccaacagcagagaaacagcca
tgctcagatagatatcggatatataaagcccggaaactgagagaaatgttaaaagaagaa
ctgagaaaggagaagaaacagtggaaaaacaagtatgccacaaatgaaagtcagaggcct
ccagatcgttcaaaaatgaccatgagagacttcatatattatctgccagataacaatcca
atgacttcttcactggagcaagaaaagagaacggaaaaatccttgacaacagtccagagc
aaagagcaagaaaataagaatcctcctgatactgaagataatgaagacatagaagaagag
gcagatgatgggccattgcttgttcctcgagtgaaggtggcagaagatggttctattatt
ttggatgaagaaagtttaactgtagaagtgttaaggacaaaagggccctgtgttgttgaa
gaaaatgaccccatatttgagcgtggctctacaactacgtattccagctttaggaaaaac
tattattccaaaccgtggtcaaataaagaaaccgacatgttctttttagccatcagcatg
gtaggaactgacttttctatgatcggacagctttttcctcacagagcaagaatagaaatt
aagaataaatttaagcgtgaagagaaaaccaacggatggaggattgacaaagcatttcag
gaaaagcgtccttttgacttcgatttttttgctcatttgcttcagaaagttcttgctgaa
gaagagaaaagaaaacaaaagtctgtaaaaagtcagcctttaaaggagaagaaatcttct
aaaccacagaaaaatgtcaaagtgaagaaagttaccagtgaaggagtcagtgatgatctt
gatgagtctgtgggcaataaagtttcagacacagaaggacttcagaaagatgctcagaca
attgaagaacagtcttcagcttcatcggagcaggatttggaacagggtgcaccagaggca
gacctaaatcaaaacaaaaggagaaagaagaatcaggaggaaagtggcaaacaggcagtc
aaaaatcattcagaaaataccactgctcagccagcgccatctgaagaagagaaacagaat
gataaatgtcagcctttaaggcctgagataaatgaagatgatggcaataaggaacaggtg
cttttctgcattcagaactcagaagacatcagtttctcctctgaaaaagtggagaaaaga
actgatcctattctgtctttaagtcagcaggatgctatgtcagtcagaggcgagaccttg
gaatcacatgctgcaaattcccctccatcagatgtcaatgtggaagacttgtgtgagctc
aatgttgctgagggtagttctacagaagaaagaactgtggtcgtggaaagtaaaacactg
gaagctgatcaagaggaaaatcttaaacccaaggtgagaggacgactccagagacctaaa
cccaatttatcaagggcagttgggaagaaaccagttcttacacaaagcaaaacacttgaa
gagagcaagagtttacatccagaaacttccgttgaaaagagtaacatggaaaaggatgaa
gtgaatacagttgacatttctggaatggagaatacagaggtaaagaatgcagatgttgag
actgtactgaattcgagtgaaaaaaattgtccacaggaagatgacgaaccaaaggttttc
agacctgcacgaccactaaggggacgattgcagaggccgaagccaaatttaagtaaagct
gctgaaagaaaagagactccagcatcacaggataaaaatggggctgaaaatgtagaaaag
agtgaaattcaaccctgtgttgatagaaatactcccaagcaagtagaagaccagtcatgt
aaaaattttgaatgtgaaaatgtcatgtcacaacctgagaaaaatgatccttctcagaat
atacagttagatgatcatgaggctcctaatgaatgtctgagtaatattcaagaggatagt
acatcaaatgtattcaaacaagttccagttctaaagactcgatttcagaaaccaaagcca
aatataggaagaggaactagaaaaagagaaatgttctctaaggaggaggtagcagaggag
attctttcctctgagaaaatgacagcagctttgagagaaattgcaagactggaaatctca
ccaagggaggaggtacccgtagaggttgatactactcaagaaataaattcttctttaaaa
gaatctgaaagaagagatatatctcccaaggaaaagattgcagagacagttgacaccact
gaagaaatggaaacagatttgaaagaaactggagtggagatttcatcaagtcagacagta
gcagaggtgactgaagtcatcgaggaagaagagttaggtttcaaagaaactgaagtagag
atttcaccaagtgaatcagtacctgaggtgactgaaatcactgaggaaaaagagtcacat
ttaaaagaaactggggtagagatttcacaaagggagatgataccagagatgactgatgtc
attgaagaaaaagagtcagatttgaaagaaattgtagaagagattacactatgtcagagc
ataggagaggtgatagaaatctctgaggaaaaagaaacagatttgaaaaaaactgaagaa
gagattacaccatatcagaggatagcagagatgatagaaaccactgacaaaaaagagtca
gatttgaaagaaactggagaagagatcatactctgtcagaggatagcagaggtgattgga
atcactgaggaaaaagaaacagatttgaaagaaactggagaagagactaccccatgtcag
aggattgcagagatgatagaaatcactgaggaaaaagagtcagatttgaaagaaactgga
gaagaaattacaccatatcaaaggatagagatgattggaatcaccgaggaaaaagagtca
gatttgaaagaaactggagaaatgattacaccgtatcagactatagaaatgatagaaatc
actgaggaaaatgagtcagatttggaagaaactgaagatgagattataccatatcagagt
atatcagagatgatagaattctctgaggaaagagagacagatatgaaagaaattgaagag
attacaccatttcagatagcagagatgatagaaatcactgaggaaagagagacagatatc
aaagaaactgaagagattacaccatgtcagaggatagcagaggagattgaaatcgctgag
gaaacggagacaaatttagaagaaactacacaaaaagaaatacctcaaaatgaaagagtc
ttaaatgaggtcaatacatttggtgaagtagagacagatttgagggcaactggaaaagaa
atttccctaacggaaaaggcaccggtggggatcagtgccatagaggaaagggaggttttt
atgaaagaaactggaaaaggagatatgtccctgctggagaaaataccaggaaatgggact
ggcagtggggaaaggaaggcagattttaaagaatctcaagaggacattttcttgatgaaa
agcagatcagaagaaattggtgctgctgaggaaatggtggcagatttaaaaacaatgaga
cctgtagacgtttctctaagggaaaatagaaccgaggagactggtaccttaagacaaact
gagacagacctgacacaggacaaatgtggtgactacagtgccagtccttctctgaatgcc
agtaacattagcagtgaacttcttcccatggtacaaacttctgtagaagtaaaaacaagt
tctgaaatggaaatgtcaagttcagtgcactctttgcaaattttagactgtgatataata
gaagatcaagggacgcagcctacagatactcaagagcagttttcagatgttaatataagc
acatcacttcctgaagagcagaagccagctgaagttaagccagcaccttttgtgaggagc
cgatttaaaagaccaaaaccaaacttggcaagagcagctttgaaaagggaaaccctggca
gcaaaaacacctgttttggggaagaaattggaacctgctaaaatggagggtgctgtgctg
gcgcagaacacagttctgtctgaccagcaggacgtgtctcctctcacaacatcaggagag
aaagacgagtcatatcccagggagggggctgctggggccctgccttgcgtgcagtctgag
caggaccctctgcccacaagttctggtgactctaaagaggaggctgagtctacaccagcc
cgggaagaggatgtcgctatttctctgggaactcagagtacgagcagtttgcagcaagag
atgaaggaaagcacaacccaaagtgctgtaccggtaaggggccggcttcagagacccaga
ccaaacatcagaaaggctgggcagcggcaggtagcatcaggagttgaagccagagacggg
acacttcaggatcaaagaacaacattacaaaaagaggaagcggaaaagaaattgctggat
gcggcaaattctcagcttggaattgaaattgaagttgtatcctccaaaatttcagaatgc
agaatgaatgatattttagatgaacagaaaagtcatgagcataaagcaactgttcccagt
ccagcacccttggtaagaaggcaattccaaaaggctaagccaaatctgggacgagcacat
ggcaagagagaggagcgctgtctaggaaaagacagggctggtcagagccaggcaaaggag
ccagaagagaattggctgcagcaaggaaagtctgacacccagctgctggaaaaagacaag
tctgagcttaagacgtctcacgagatttcagcaagaaaggattgtatagtaggttccgca
gagcctggtttgatgaagaaaggtgctcagtcagaagttagaccatcagcaagtattgga
gaaaaaagtataggggataattctatgtcttccattattaaagagcaacatctcagtaaa
ccacccagttgtccacagctcttaaaagagccaagttattctaaaactgctttggatcga
agaacagcaagctcttctatctctgagcatgaaacagatcacagcgagaggagaacgcac
agaaagatcaaatcaaatgctgctcgagggcgcggatcaaaacgggtgcggagtaaggcc
cctaagaaggaacctcgaacttcaaaagccatgctggtgacccttcgcgcctctcaggaa
gaagaggacgacgatgatgatttggacctcgactatgaagaagaaagctaccatcttgct
cccgaagaagtgaacaaagcgcccgtgttcgtgcccattggcctcagatctcctgaaccc
gttgctgctcagatcgaagaaacaatggaagagcttgaaataaccatggatgttccagat
gttggatgcataacagttgttgaacaggagcttctaaatgtagaagtaaatcctcaggaa
gtgaaacaagatgtcagtgagaatatgctaacagttgaaataaccacaagtgaacatacc
caaaatgaagcaggtcccagtgaaggaaacactgaagctgccgtagctttgctcacagtg
ggagacgtgctgctgcagtcagagatcagcatggaacaggggcaagtaggaatatgtgta
cttcctgatgttcagtcaagggataaaaaccatattccttttagcccagatcatgtaaat
cacagcattgtgcacgaatgccaggacctttcttcacctgtgactactaattctctccca
tcattgaaagaaaacaagattgtactggacgggcaaagtactacagaaaaaattgaatta
atggaggaagcaaaagaagaaattctttcaaacagcaatacagcttctgaagtgaccaat
aatttgaaaatgagacgtagatttgccaaacctaaggtaaatcttaagaagattttaggg
accagtagtgttggtgctcattctaatttgtctggaaccaaaggagaagaggaggaaatt
cacagagaaactgagaaaagcgcttctgatgcggcagaattagaagagaacctcggagca
gtcgcagcaacagaaaactgggagcaaagcaaattggtggatgcgagtggtgtccagggg
cccccggagcatgaagacctgactgagagaaatgaagatcaggaggcagagcaccagcag
gctcagatactttcagttgccccagttgtttctgcagatccaagcagttccccgcacaca
cttggctcgagtgaggctctcgatgagagtcctatggaaacaccactggccccgggctca
gagggctgcaatgtgctcacgctccacgtgccagagtgtgtatcaactagtattccggaa
atccaagaagagaatgtaatcggttctcaagatctaacagtgaatgtcattgctgctgat
ggacaacaagataatgaggatgaacacacgttcatcttaactctggtggaaatcccagcc
aatgaagtggaagagtttgctgacacaactgcccaggtgatgccaaaccctttactgcca
gcacccatcttgctgaagtcagtgaataatgaagaaacgggtgatttgagtatgaatttc
ccagtaacttctatcagtcaggatgccatgtgtttatctgactctggaagagaatctgaa
aagcctcctgccaacttggatgtatcaaggaagagatttcactgtagccttgatgagagt
gacagtgttcctcctgctaagaaaagttcatttgattcagtggataattgtgagaaatat
tcctctgaggtgtgttcaaaggaattgatgaatgtttttgaagaaacaggggtatcacat
aaggaacaaaacgatgttcatacttcaggaagtatacctaccactccaaaatctcagaag
aggcaacttgaaccttccactcctcagagcataggctccaggtcgcttgataaaataata
gacaggcatctagaaaagactccacctctcttacctaaggacaaaatggtcgtttctgat
aaggaagaaaggacttgctctgcttccaagtctgagcaaatgcataacagaccttcatct
tcaaagacctcactctccagacctggcagaagacccttgggatttttgtctttaatatgt
tcaaagagtagtttggagtctgatgaacctactcagtttcataaaaagaagcgccccaag
cctcttatacctgtatcaagacagaatttgaaaagatcgaactcatccagtgaaaggcag
aaaacaaacacagagtcctctgatgtgcttccatcttcaagtggtgtcagtcctgcatct
gagaacctcagcagttcggctgcagcttctcaggtttcttgtgaccatcccttactggaa
gaaaaatgtaaaagtggctcaaaccagacacctggggaggagccaacaacagtgtctgag
tatttctttggtgatatcttcatcgaagtggatgaaacacaatga
DBGET
integrated database retrieval system
