Sorex fumeus (smoky shrew): 130021703 Help Entry 130021703         CDS       T10594                                  Symbol VCAN Name (RefSeq) versican core protein   KO K06793   versican core protein Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04514   Cell adhesion molecules sfum04820   Cytoskeleton in muscle cells Brite Proteoglycans [BR:sfum00535]  Extracellular matrix (ECM) proteoglycans   Aggrecan / versican family    130021703 (VCAN) Glycosaminoglycan binding proteins [BR:sfum00536]  Hyaluronan   Extracellular matrix or blood plasma proteins    130021703 (VCAN) Lectins [BR:sfum04091]  C-Type lectins   Lecticans    130021703 (VCAN) BRITE hierarchy SSDB OrthologParalogGFIT Other DBs NCBI-GeneID:  130021703 NCBI-ProteinID:  XP_055968449 LinkDB All DBs Position Unknown AA seq 3253 aa AA seqDB search MLVNIKIILWICSILITTNSQQNDKVGKSPTVKASLSGKVDLPCHFSTMPNLPSSYNTTN ELLRIKWSKIEVDKNGKDLKETTVFVVQNGNVKIGDDYKDRVLVPTLLEDGGDATLTMLK VRASDAGLYRCDVMYGLEDTQHTVSLAVEGVVFHYRAATSRYTLNFESAKQTCLDVGAVI ATPEQLYAAYEDGFEQCDAGWLSDQTVRYPIRAPRVGCYGDMMGKQGVRTYGFRSPHETY DVYCYVDNLDGDVYHITGPNKFTFEEAKEECENQDGRLATVGELHAAWRNGLDQCDYGWL SDSSVRHPVTVAKAQCGGGLIGVRTLYRFENQTGFPPPDSRFDAYCYKTKQNITEATTIE FEETASSSFSTELVPDRTTPFIPLVTELPLITTAFPPVGNIINFEQKTTAQTVTHRVVTE SPLSAASTKMPLDMSSYLPSLAPLEKPDISEITEQVPPSSTVISHHTTDSRDDMTEDIQT QESVTQIEQIEVGPLVTSMEISKHLPSQESSITETPFRSTTMTQESKTEKKTVSPFSETV ATDSYGFTLGGDDGEDRTFTVRSAQSTLVFSQMPEVITVSKTSEDTTPTQLEHLESVSTS TAVPPITMPGSDGSPRTWEEKETNGFDQSVSTTPLPSLHQTEVELLPYSHDKNLVGRKTT IVYPYLETKMPQGKERTETEAGDLEEELVTTPIGLETSGYQDTTKYDEGITAQHLTQSTQ TLEVVTVSKWSWDEENTTSMLLEPTEHTGSPELSTALLTTVGMSEMGKEIPSFTEDGKDE FTHIPDSTQTSLESTEEDTERAPSITSTEGPVVYPTTEGSASGEGEDVEVSKPASVVPQF SFTSDDEGLAFVNYSSTQEPTTYVDSSHTIPLTVVPKTEWGVLVPSVSSEGEVLGEPSQD IRVIDQTHFHSTVSPEILKTATEVMQGTTGEFLWKEQTPKITVPALSSTPGTTQETTSFL DETDSDGSAYTVSEDRSVSTSEGVPGLETTPAGKIDQSMFYPPGAVTEQKGKKDEITLTS SVEPKESLSAEPEPKDKIEGTSSTPFSITATEFIEETITEEREKTSLDYIDLGSRVFEKP QTTEISTIKATVPSDTTTFFSLEDKLHTISAPQPSSASTEKPPLIDREPGEETTSDMMII GESTSYISPTPLEDIVTKETEADIDTEYFTSSSIPASQPTRPLIANETEVFRPQTLSTTQ PSVGTKLQPEINVYIIEVRENKTGRMNDLSVIGHPIDSESKEDEPCSEETDPEHELILPQ YIEIDLYHSEEDEEEEEDCENATDVTTTPSVQYINGKHLVTTLPKDPEVAEARRGQFESV APSQNFSESSESDTHSFIIDENGLSTGLQPNESIETTESFEIPWIPEIQSEIPEHFSSGE TDAFPTAPFQEQETTEEPESITKGTPELDRLVPEHTNPPALFPEEYSGDATIDQESLKTV ISRATEVTFGEEAGKSDSIIYPLSVTSSSPSANISEEVSVTLAGNSWSDDPVSTIESWME ATPQQIVEFSGNPSVPVPDGSGEAEEDNKDKIFTIETDLSPKSTTDTLKILDTSNGMITE NLFNVPVTSIYSVSEQNSAEVEPTKSVRETDTSTWVLSTFLEGKTRKDEEEGFTGTSSTV EVFSPTQRSDQLFLPSELENKNEATSGDSPFVTRKSFVSLTTPTQSEQEMSSSLLVFTET NVLDNMGTESSESRISNQSGILKGLSTASGSPFMEHGSGEAATDLEVTTVSSFSLHFEPE IQTKKEAAGTLSPQVESEFSVEPKGLVSSTEVDREATKILSRTSKENPFSEGSGAPDYEA EIKFFPTDFPLEEDFSGDFREYSTVSYPVSKEEMVVPEGSGHATLKDFQIEPSVIPSSDH IDHMADLERTDSTLISTSAFPWEEFTASAEGSGEHLVSISSSVEQVFPSAPGYVLGKDSP SIDQGLGEAGSINSSDKRSTILPTIETEDTEVKFSGTVVTDFPQTMGPAKLWSRQETNPV RQGMKSETASEEMIKEQKQFESLQGSVAPEQTSFDSQIFSETGLSTTDYSMPSTKKTYDA VKEIEEEGISSIDVSSDPDVKTLELYTTHPGVEEITHFFLPTTSVTQSTAAESVITDSLI KEEEGIKPFPKVTRPTITESDGDVLFSGLGSGEVMSTIASVSFPETEHTIHTLYPLTSQV EILETSVLSDTVEDNVGTENVPNGIRSSTRSSITQTDNISENIETASSITLLKNLGDTNK KEPTKAPFIFSTGTKQDQRHTFSWAEEIQTSRPQPMTEQASEENLSAAETKETVTSPTEY LTRTYDLEMAKGVETSSPKPANLFYEHSGEGSGEFDMVDLVHTFGTTQATSQGNPTFVSD RFLGKHSEVPSIDGATVDGFPTVSVVLPLHSEQNESFSDSTNTPSTTVSYERSPEGISGS FQDHFKESTLKPNRRKATENIIIDLDKEDKDLMLTITENPILEILPELTSDKNTIIDIDH TKPVYSDILGMQTDIDSEASHGTNEEGPQVQEIFETSVNLSSTEENFENSGEIPTSYSQA MHTELMTSEDRTQFDPMGFVFSTRIPVPRTETELDILFPTASSLPVSSKSTTVNAEIEES KIEAKAVDDIFESSTLSDGQAIADQSEIISTLGHLERTQDEYEEKKHASPSFQPEFSSGA EEALIDPSSYVSISTTHLMTQSLTEAPNVMKGSSPPDNTDRTSEVYAFAKMTSNIPASPF TALLDRETSEHTGDAQPSVLPSTEANTAQIPPGKHSNLEVPSKPPSEEITELPSDSPNTV LGLLEDYNQPKLLEQTEALPIELVTEEGIEIVPDSPYKDNVQLSRETVKVLPSVTTPESG TVVTTDGEIKLQGAVLRPYSTAASVTYKVETDVPGTSERPTVPSQEINLETQAILVKGVD STVAATEQQVSVRILDSNRQATVSPAELNTELVTPSFPLLENSNETGFLLGINEESVEGT AVYLPGTDRCKTNPCLNGGTCYPTETSYVCTCVPGYSGDQCELDFDECHSNPCRNGATCI DGFNTFRCLCLPSYVGALCEQDTETCDYGWHKFQGQCYKYFAHRRTWDAAERECRLQGAH LTSILSHEEQMFVNRLGHDYQWIGLNDKMFEHDFRWTDGSSLQYENWRPNQPDSFFSAGE DCVVIIWHENGQWNDVPCNYHLTYTCKKGTVACGQPPVVENAKTFGKMKPRYEINSLIRY HCKDGFIQRHLPTIRCLGNGRWALPKITCMNPSAYQRTYSKKYFKNSSSANDNSINTSKH DHRWSRRWQESRR NT seq 9762 nt NT seq  +upstreamnt  +downstreamnt atgttggtaaatataaaaatcatcttatggatatgctctatcttaataacaaccaattcc caacaaaatgacaaagtggggaaaagcccaactgttaaggcctccctctctggaaaagtt gaccttccgtgccatttttcaaccatgccaaacttaccatccagttataacaccactaat gaacttcttcgaatcaaatggtctaagattgaagtggacaaaaatgggaaagatttaaag gagaccactgtgtttgttgtccaaaatggaaatgtcaagatcggggatgactacaaagac agagtgttggtgccgacacttctggaggatggaggtgatgccacactcaccatgctcaaa gtgcgtgcaagtgatgcaggtctctaccgctgtgatgtcatgtatggacttgaggacaca caacacactgtatcattggctgtagaaggagttgtatttcactatcgggcagccaccagc aggtacactctgaactttgaaagcgccaaacaaacctgtttggatgttggggcagtgatc gccaccccagaacagctctatgcagcctatgaggatgggtttgagcagtgtgatgcaggc tggctctctgatcagactgtgagatatcctatccgggcccctcgtgtagggtgttatgga gatatgatggggaagcagggagtccggacttatggatttcgctcacctcatgaaacttat gatgtgtattgctacgtggacaatctggatggtgatgtttaccacatcactggtcccaat aaattcacctttgaggaggccaaagaagagtgtgaaaaccaggacgggcggctggcgacg gtgggagagctccacgcagcttggaggaacggcctagaccagtgcgactatgggtggctg tcagactccagcgtgcgccaccctgtgactgtggccaaggctcagtgtggaggtggttta attggggtgagaaccctgtatcgttttgagaaccagacaggctttcctccccctgatagc agatttgatgcctactgctataaaactaaacagaatataacagaggctacaaccatcgaa tttgaagaaactgcatcatccagtttttccacagaactggtacctgacagaactacacct tttatacctttagtcactgaattacctctcattacaacagcattcccacctgtgggaaac ataattaattttgaacagaaaaccacagctcaaactgtcacacacagagtagtcactgaa tcacccttatctgctgcaagtaccaaaatgcctttagatatgagctcctatttaccttct ttagcacctcttgaaaaaccagatatatctgaaattacggaacaagtgcccccaagttca actgtcatctctcatcacactacagattcaagagatgatatgacagaagacatccaaact caagaatcagttacacaaattgagcaaatagaagtgggtcccttggtaacatctatggag atctcaaagcatcttccttcccaggaatcctctataactgaaacaccattcagatctaca acaatgacccaggaatccaaaactgaaaagaaaacagtaagccccttttctgaaacagtt gccacagatagctatggctttaccttgggaggagatgatggtgaagacagaacatttaca gttagatctgctcagagcacgttggtcttcagccaaatgccagaagtcataactgtatca aagacttcagaagacacaacccccacacaactggagcatttagagtctgtctcaacatct acagctgtcccacctataactatgcctgggagtgatggatcacccaggacctgggaggag aaagaaactaatggttttgaccagtctgtgtccaccacacctttgccgtcactgcatcaa acggaagttgaattgcttccttattctcatgataaaaacttagttgggagaaagaccaca attgtttatccctatctagaaaccaaaatgccacaaggaaaagaaagaacagaaacagaa gcaggggatttggaggaagaacttgtgacaactccaattggcttagaaaccagtggctat caagatactaccaagtatgatgagggtatcacagctcagcatttgacccagagcactcaa actctagaggtggtcactgtatcaaagtggtcatgggatgaagaaaacacaacatcaatg cttttagaacccaccgaacacacaggctccccagaattgtccactgccttactcaccacg gtgggcatgagtgagatgggtaaagaaatcccaagtttcactgaagatggaaaggatgaa ttcactcacatcccggatagtacccaaacatcactagaatcaactgaggaagacacagaa agagctccatctatcacaagcacggagggccctgttgtttatccaaccacagaagggagt gcttctggtgaaggggaagatgttgaggtctcaaaacctgcatctgttgtgcctcaattt tcattcacttcagatgatgaaggattagcatttgttaactacagtagtacccaggaacct actacttatgtagatagttctcataccattcctcttactgtagttcccaagacagaatgg ggagtattagtaccttctgtttcatcagaaggtgaagttctaggtgagccctctcaagat atacgtgtcattgaccagactcactttcattcaacagtttctccagaaattttaaaaaca gcaacagaagttatgcagggaacaactggagaattcctttggaaagaacagactcccaag ataacggttcctgctctcagttcaactcctggaacaacccaggagacaacatcatttctg gatgaaacagacagtgatggatcagcctatacagtctctgaagacagatcggtgtcaaca tctgaaggagtcccaggtttagaaacaactccagctggaaaaattgaccagagtatgttt tatccacctggggctgtcactgagcaaaaaggcaaaaaagatgaaatcacactaacctca agcgtggagccaaaggaatctttaagtgcagaacctgaaccaaaagataaaatagagggt actagttcaaccccttttagcatcactgctaccgagtttatagaggaaaccattactgag gaaagagagaaaacatccctagattatattgatttaggctcaagagtatttgaaaagccc caaaccacagaaatttcaacgattaaagccacagttccaagtgacaccaccactttcttc agtttagaagacaaacttcacaccatttcagctccccaaccatcatcagcgtccactgag aaaccacctctcattgatagggaaccaggtgaagaaacaaccagtgatatgatgatcatt ggagaatcaacatcttatatctctcctactccccttgaggatattgtaaccaaggaaaca gaagctgatattgacactgagtatttcacaagttcaagcattcctgcttcacagccaaca agaccactcattgcgaacgagacagaggttttcagaccccagacactttctacaacgcaa ccctcagtggggacaaaacttcaacctgaaataaatgtttatattattgaggtcagagaa aataagacaggtcgaatgaatgatttgagtgtaattggtcatccaatagattcagaatct aaagaagatgaaccttgtagtgaagagactgatccagagcatgaactaattttacctcag tacattgaaatagatttataccacagtgaagaggatgaagaggaagaggaagactgtgaa aatgctactgatgtaaccactactccatcagtgcagtacataaatgggaagcatcttgtc actaccctgcccaaggacccagaagtggcagaagccaggcgcggccagtttgaaagtgtt gcgccttctcaaaatttttcagaaagcagtgaaagtgatactcattcatttataatagat gaaaatggattgtctactggtctacagcctaatgaatctatagaaacaacagaatcattt gaaatcccatggatacctgaaattcagtctgaaataccagaacatttttccagtggtgag actgatgctttccccacagctccatttcaggagcaagaaaccacagaggagccagaatcc attacaaagggaacacctgagctggatcgtctggtacctgaacacaccaatcctccagct ctgtttcctgaagagtattcaggagatgccaccattgaccaagaatctctgaaaactgtc atttcaagggccacagaagtaacatttggtgaagaggcaggaaaaagtgattctatcata tatcctctaagtgtaacttcaagttctccatcagcaaatatttcagaggaagtatcagtc accttagcaggaaattcatggtctgatgatccagtatccaccatagagagctggatggaa gcaacccctcaacagattgttgaattctcagggaatccttcagttcctgttccagatggc tctggagaagcagaagaagataataaagataaaatcttcaccatagaaactgatttatca ccaaaaagtaccacagacacactcaaaatcttagataccagcaatggcatgattacagaa aacctttttaatgttcctgtgacctctatttattctgtttctgaacaaaattctgcagaa gtagaacctaccaaatccgtaagggaaacagacacttccacctgggtgttaagcacattt cttgagggaaagacaaggaaagatgaggaagaaggatttacaggtacatcctcaacagtt gaggtgttttcacctacccaaagatcagaccaattatttttaccctctgaacttgaaaac aaaaatgaagctacatctggtgattcaccatttgttaccaggaaaagttttgtgtccttg acaacacccacacagtctgaacaggaaatgtcaagttctcttcttgtcttcacagaaaca aatgttttagacaatatggggactgagagctctgaatccaggattagcaatcaatctggt atactgaaagggttgtccactgcatcagggagtccctttatggagcacggatctggagaa gcagccactgacctagaagtgacaactgtttcttcgttttcattacattttgagcctgaa attcagaccaaaaaggaagcagctggcacactgtcaccccaggtggaaagtgaattctct gttgagccaaaaggactagtttcaagtacagaagtggacagagaggctactaaaattcta agtcgaacatctaaagaaaatccattttcagagggctcaggtgcacctgattacgaggca gaaattaagttctttcctacagattttcctctggaggaagattttagtggtgactttaga gaatattcaacagtatcttaccccgtttcaaaagaagaaatggtagtgccagaaggctct gggcatgcaacacttaaagatttccagattgagccgtctgtaatacctagttcagatcac attgatcacatggctgacttggaaagaactgacagtaccttaatcagcacatcagccttc ccttgggaagagttcacagcatctgctgagggttcaggtgaacacttggtctcaattagc agctctgttgaacaagtgtttcccagtgcgccgggatatgttttaggtaaagattcacca tctattgaccaaggtttgggagaagcaggttctattaacagctctgataaaagatccaca attttaccaacaatagaaactgaagatactgaagtgaagttctctggcacagttgttacg gactttcctcaaactatggggccagccaaattatggtctaggcaagaaactaatcctgtt agacaaggaatgaaaagtgaaacagcttcagaggaaatgattaaagaacagaaacaattt gaatcactccaaggctctgtggctccagaacaaacaagttttgattcacaaatattttct gaaacaggactcagtacgacagattattctatgccatcaacaaagaaaacttatgatgct gttaaggaaattgaagaggaagggatttcctcaattgatgtctcttcagatccagatgta aagaccttggaactctatactactcacccaggagttgaggaaataactcattttttctta cctactacctcagtgactcagtctacagcagctgaaagtgtaattacagattcattaatc aaagaggaagaaggtattaaaccctttcccaaagttacaagaccaacaattacagagtca gacggcgatgttttattttctggactaggatcaggagaagtcatgtctactatagcatct gtgagttttcctgaaacagaacataccattcacacactatatcctctaacttctcaagtg gagattttagaaacaagcgttttaagtgatacagttgaagacaatgtaggaacagaaaat gtgccaaatggtattagatcatccactagatcatccattacccaaacagacaacatctct gaaaacattgaaactgcatctagcataactttactgaaaaatttaggtgacaccaacaag aaagaacccaccaaggcacctttcattttctccacaggcaccaaacaggatcaaaggcat actttcagctgggcagaagaaatacagactagtagaccacaacctatgactgaacaagct tctgaggagaatttgtcagcagcagaaacaaaagaaacagtaacctcccccactgagtat ctgactagaacttatgatcttgaaatggccaagggagttgaaacatcatcccctaaacct gctaatttgttttatgaacattctggggaaggatctggggaatttgatatggttgattta gttcacacttttggaactactcaggcaaccagtcaaggaaatcctacatttgtttctgat agattcttgggaaaacattctgaagtgccaagtattgatggtgctactgttgatggattc ccaacagtttcagtggtgctacctcttcactcagaacagaatgaaagcttctctgattca actaacacaccctcaactacagtgtcatatgagaggtccccagaaggaatttctggtagt tttcaagaccatttcaaggagtccaccttaaaacctaaccgaagaaaagccactgaaaat attattatagatctggacaaagaggacaaagatttaatgttaacaattacagagaatccc atccttgaaattctacctgaactgacatcagataaaaatactatcatagatattgatcac actaaacctgtgtattcagacatccttggaatgcaaacagacatagattcagaggcatca catggcactaatgaagaaggccctcaagttcaagagatttttgagacatctgttaatctt tcttcaactgaggaaaactttgagaactctggtgaaattccgactagttacagtcaggcc atgcatactgaattgatgacttctgaagacagaacccaattcgatcccatgggctttgtc ttctccaccaggatccctgtccccaggacagaaacagaattagatattttatttcccaca gcatcatccctacctgtttctagtaagtctaccacagttaatgcagagattgaagaatcc aaaattgaagcaaaagctgtagacgacatctttgaatctagcacactatctgatggtcaa gctattgctgaccaaagtgaaataatatcaacattgggccatttggaaagaacacaggat gagtatgaagaaaaaaaacatgcaagtccttcttttcagccagaattctcttcaggagct gaggaggcactgatagatccttcatcctatgtaagtattagtactacccaccttatgact cagagtttaacagaagcacccaatgtgatgaaaggatccagtcccccagataacacagat agaacgtcagaggtttatgcttttgcaaagatgacttcgaatataccagcctctcctttc actgcccttttagaccgggaaacctctgaacacacaggggatgcccagccaagtgttctg ccaagtacagaggccaacactgcacaaatacctccaggaaaacattcaaatcttgaagta ccttccaaaccacctagtgaagagataactgaacttccctctgattctccaaacacagta ttaggactcttggaagactacaatcaacctaagttattagaacaaacagaagctttgccc atagaactagtcactgaagaaggaattgagattgtcccagattccccctacaaagacaat gttcaactttctagagaaacagtcaaggtacttcctagcgttacaacacctgagtctgga actgttgtcacaactgatggtgaaattaagttacaaggtgctgtgctgcggccatattct actgctgcttctgtgacttacaaggtagagactgatgtgcctgggacctctgagaggccc acagttccttctcaggaaataaaccttgaaacacaagcaattttggtcaaaggggtggat tccacagtagcagcaacagaacaacaagtatcagtgagaattcttgattccaatagacag gcaacagtaagccctgcagagttaaatactgagcttgtgacaccatcatttccccttctg gaaaattctaatgaaactggtttcctgcttggcattaatgaagagtcagtggaaggcaca gcagtttatttaccaggaactgatcgttgtaaaacaaatccgtgccttaatggaggcacc tgttatcctactgaaacttcctacgtgtgcacctgcgtgccgggatacagtggtgaccag tgtgaactagattttgatgaatgtcactctaacccctgtcgcaatggagccacatgcatc gatgggtttaatacattcagatgtctctgccttccaagctatgttggtgcactttgtgaa caagacactgagacttgtgactacggctggcacaaatttcaagggcaatgctacaaatac tttgcccatcgacgcacgtgggatgcagctgaaagagaatgccgtctgcagggtgcccat ctcaccagtattctgtctcatgaggaacaaatgtttgtgaatcgcttaggccatgattat cagtggataggcctcaatgacaagatgtttgaacatgatttccgttggactgatggcagc tcactgcaatatgagaactggagacccaaccagccagatagcttcttttctgctggagaa gactgtgtggtcatcatttggcatgagaatggccagtggaatgacgtcccctgcaattac catctcacctatacctgcaagaaaggaacagttgcttgcggccagccccccgttgtagaa aatgccaagacttttggaaagatgaaacctcgttatgaaatcaactccctgattagatat cactgcaaagatggtttcattcaacgccaccttccaactattcgttgtttaggaaatgga agatgggctctgcctaaaattacctgcatgaacccatctgcataccaaaggacttattct aagaaatactttaaaaactcctcatcagcaaatgacaattcaataaatacatcaaaacat gatcaccgttggagtcggaggtggcaggagtccaggcgctga

DBGET integrated database retrieval system