KEGG   Sorex fumeus (smoky shrew): 130021744
Entry
130021744         CDS       T10594                                 
Symbol
WDR41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum04140  Autophagy - animal
sfum05014  Amyotrophic lateral sclerosis
sfum05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    130021744 (WDR41)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    130021744 (WDR41)
   05022 Pathways of neurodegeneration - multiple diseases
    130021744 (WDR41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sfum04131]
    130021744 (WDR41)
Membrane trafficking [BR:sfum04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    130021744 (WDR41)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WDR55 Beta-prop_TEP1_2nd WD40_WDHD1_1st Beta-prop_TEP1_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_SCAP WD40_RFWD3 PorZ_N_b_propeller DUF5793
Other DBs
NCBI-GeneID: 130021744
NCBI-ProteinID: XP_055968514
LinkDB
Position
Unknown
AA seq 458 aa
MLRWLIGGGREPQGLTEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASA
GDDGIVVVWNAQTGEKLLELNGHTQKITAIITFPSLETCTEKSQLILTASADRTVLVWDC
DSGRQVQQVSCFQSTVKCLTVLQRLDVWLSGGNDLCVWNRKLDLLCKTPHLSDTGISALI
EIPENCIVAAVGKELIIFRLVAPTERSLEWDILEVKRLLEHQDNILSLVNVNDVNFVTGS
LIGELIIWDSLDWTVQACERNFWDPSPQLDTQQEIKLCQKTNDISIHHFTWDEENVFAAI
GRGLYVYNLPTKRVVACQKTAHDSSVLHIARLPNRQLISCSEDGSVRIWELREKQQLAAE
PVPTGFFNMWGFGRVSKQASQPVKKQENATSCSLVLLGDLIGHSSSVEMFLYFEDHGLVT
CSADHLIILWKNGERESGLRSLKLFQKLEENGDLYLAA
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgttgcgctggctgatcgggggaggccgcgaaccccaggggctgaccgagaaatctcct
ttacagacgataggtgaagaacaaacccagaatccctacactgaactacttgtactaaaa
gcacatcatgacattgtacgatttctggtccagttagatgactacagatttgcatctgct
ggtgatgatggaattgtagttgtgtggaatgcccagacaggagaaaaacttttggagctc
aatggacacactcagaagataacagctattattacattcccttccttggaaacttgtaca
gaaaaaagccagctgatcttgacagcctctgctgatagaacagtcctggtatgggattgt
gattctggcagacaagttcagcaagtatcatgcttccagtccactgtaaagtgtttaact
gttcttcaaagactggatgtttggctctctggtgggaatgacctatgtgtctggaaccga
aagttagatctcttgtgtaagactcctcacctttctgatacaggaatcagtgctttgata
gaaatacctgagaactgtattgtggcagcagttggcaaagaactgataatttttaggttg
gtagcacccacagaacgatcactggaatgggatatccttgaagtaaaacgtctccttgaa
caccaggataatattctttcattggttaatgtcaatgatgtgaattttgtaacgggttcc
ctcattggagaactgattatctgggatagcctggattggactgtgcaggcctgtgaacgc
aacttctgggatccatctccacagctggatactcaacaggaaataaaactctgtcaaaag
acgaatgacatttctattcatcacttcacctgggatgaagagaatgtgtttgccgccatt
ggacggggtctgtacgtgtataacctgccgacgaagcgtgtggtcgcctgccagaaaaca
gcacatgactccagcgtcctgcacattgccaggctgccaaacaggcagttgatctcctgc
tcagaagatggcagtgtgcgcatttgggagttacgcgagaagcagcagctcgccgctgaa
cccgtaccaacaggattttttaacatgtggggatttggaagagtgagtaaacaagccagt
caacctgttaaaaagcaagaaaatgccacttcatgttcactggtgcttcttggagatttg
attggacactcatcatctgtggagatgtttctctactttgaagatcatggactagtgaca
tgttctgctgatcatctcattattttgtggaaaaatggggaacgagaatctggactgcgc
agtctaaaattatttcaaaaattagaggagaatggtgacttatatcttgctgcctag

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