Sorex fumeus (smoky shrew): 130022048
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Entry
130022048 CDS
T10594
Symbol
REXO1
Name
(RefSeq) LOW QUALITY PROTEIN: RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03008
Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-60S particles
RNases
130022048 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130022048
NCBI-ProteinID:
XP_055968741
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Position
Unknown
AA seq
1204 aa
AA seq
DB search
MLRSTGFFRAIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGGGGAAPSAAGLGYDPYN
PELPKPPAPRENGALGRGDEPRTDMLELELVNQAIEAVRSEVELEQRRYQELLDTAREXR
APRPTPRAPAGLDDGAFSLAFDYSPSSCGTGGPDATYQPTPLAPVEAGGKYSLGPGAGGG
GALEYIPKALSQPRRARPVPSGKYVLDDSKPSTDLEYDPLSNFSARLLSRSRAGASDEPA
AKRPRGARPSEPYTPAPSKPCDPFAACEARFSDSDDDNEAPGVPASPPRDQAAAATPRRG
RQKPPETRLQGGPPXEPDEGALRLTKETAVQCDGGDLGQPPGAKPEPSGPASQEHQDPKE
GKPKKKSHKDKDGVPKKDRAKGAPPAGRPEKARVDKRGLQASGSRPPAGTKRKPSAASPV
AGSGKARPEKPSPANGGPRPSPQERPGARSGGSSGKAWVGKLAERKARSLDEGAARDAPK
LKRRALSHAELFGDESEDEAPXPRGPPRAPALLSLSSSSSDSDSDSSGGGRGPPKRLKVS
PPPAAAAAASLASPPSSSSSSSSSSPSPGAGAAVAVDYAALEKEVDFDSDPMEECLRIFT
ESTRVKTQDRGRLARQPPKEGKTEDKGQAGLTTLFPGQKRRVSHLTKQGKEVEPARRVPV
PPARPPSAQEVCYRRAQQAQQDSARWLLSAQKPSSSSSSSSSSSVHISAPGEKRRIAHVP
NPRLAAAPTGAKRTLAASCSQPPNGPELGGQPLKTRTLSGMASKTTSTVTPKRVAHSPSL
QSLKKPVIPKEFGGKVPTVIRQRYLNLFIEECLKFCPSSQEAIEKALNEEKAAFDRSPSK
NIYLNVAVNTLKKLRGLVPSAGPGVTKTSSRRLVSHEVVLGGKLAAKTSFSLSRPSSPRV
EDLKGVALYGRLKDYLLSEDQLQENGFPFPHPERPGGAVLFTAEEKKPKDSSCRICCRCG
AEYLVLPSGRCVRQEECVYHWGRLRRNRVAGGWENQYMCCSGAVGSTGCQVAKQHVQDGR
KENLEGFVKTFDKELAEGAHPGIYALDCEMSYTTYGLELTRVTVVDTDMQVVYDTFVRPD
NEIVDYNTRFSGVTEADLADTSTSLRDVQAVLLSMFSSDTILIGHSLESDLLALKVIHST
VVDTSVLFPHRLGLPYKRSLRNLMADYLKQIIQDNVDGHSSSEDASACMHLVVWKIREDA
KTKR
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctacgctccaccggattcttccgggccatcgactgcccctattgggccggggcgccc
ggggggccctgccggcggccctactgccacttccggcaccgcggggcccggggcccgggt
gcgcccggcggcggcggagcggcgccctcggcagcagggttgggctacgacccctacaac
cccgagctgcccaagccccccgccccgcgggagaatggcgccctgggccgtggggacgag
ccgcggaccgacatgctggaactggagctggtcaaccaggccatcgaggccgtgcgctcc
gaggtggaactggagcagcggcggtaccaagagctgctggacacggcccgcgagnncagg
gcgccgcggccgacaccccgggcccccgccggcctggacgacggcgccttctcgctggcg
ttcgactacagccccagcagctgcggcacgggcggccccgacgccacctaccagcccacc
ccgctggcccccgtcgaggccggcggcaagtactcgctgggccccggggctggcggcggg
ggcgccttggagtacatccccaaggcgctgagccagccccgtcgagcccggcctgtgccc
agcggcaagtacgtgctggacgattccaagccgtccacggacctggagtacgacccgctg
tccaacttctctgcccggttgcttagcaggagcagggccggtgccagcgatgagcccgcg
gccaagcggccccggggcgcccggcccagcgaaccctacacgcccgccccgagcaagccc
tgtgacccctttgccgcctgtgaggcccgtttctccgattccgacgacgacaacgaggcg
cctggggtccccgccagcccccccagagaccaggctgccgccgccaccccccgccgcgga
cggcaaaagcccccagagaccaggctccaaggaggcccaccannggagcccgacgagggt
gccctgcgactgaccaaggaaacggccgtgcagtgtgacgggggcgacctgggccagccc
cccggcgccaagcccgaaccctccggcccggcctcacaggagcaccaggaccccaaggag
gggaagcccaagaagaagagccacaaggacaaggatggcgtccccaaaaaggacagggcc
aagggcgccccgcccgctgggcgccccgagaaggcacgcgtggacaagcggggcctgcag
gccagcgggtcccggcctcccgcgggcaccaagaggaagccgtccgccgccagccccgtg
gccggctccgggaaggcccggcccgagaagcccagccccgccaacgggggtccccggccc
agcccccaggagcggcccggggcccgcagcggtggcagcagcgggaaggcctgggtggga
aaactcgccgagcgcaaggcccgctccctggacgagggggccgcccgcgacgcccccaag
ctgaagaggcgcgccctgagccacgccgagctcttcggggacgagagcgaggacgaggcg
cccnncccgcgcggccccccccgggcgcccgccctcctcagcctcagctccagctcctcc
gactcggactcggacagcagcggcggggggcgggggccgcccaagcgcctcaaggtctcc
ccgccccccgccgccgccgctgctgccagcctggcctcccccccttcgtcctcctcctcc
tcctcctcctcctccccctccccgggggcgggcgcggccgtggccgtggactacgccgcc
ctggagaaggaggtggactttgactcggaccccatggaggagtgtctgcgcatcttcacc
gagtccactcgcgtcaagacccaggacaggggccggctggcccggcagccccccaaggaa
ggtaagaccgaggacaagggccaggcgggcctgaccacgctcttccccgggcagaagaga
agggtttcgcatctgaccaagcagggcaaggaggtggagcccgcgaggagggtcccggtg
ccccctgcccggccccccagcgcccaggaagtgtgctaccggcgagcccagcaggcccag
caggactcggcccggtggctgctttcagcccagaagccttcgtcatcgtcgtcgtcatcc
tcttcctcctctgtgcacatctcggcacccggcgagaagcggagaatcgctcacgtgccc
aacccccgcctggctgcagcccccacaggcgccaagaggaccctggcggccagctgcagc
cagccccccaatgggcccgagctgggtgggcagcccctgaagacgcgcaccctgtcgggg
atggcctccaagacgaccagcaccgtcacccccaaacgcgtcgctcacagcccatctctg
cagagtctaaagaagcccgttatccccaaagaattcgggggcaaagtccccaccgtcatc
cgccagcgatacctcaacctgttcatcgaggagtgcctcaaattctgcccctccagccag
gaggccatcgagaaggcgctgaatgaggagaaggcggcctttgaccgcagccccagcaag
aacatttacctgaacgtggccgtgaacacactcaagaaactgcgcggcctggtccccagc
gccgggcccggcgtcaccaagaccagcagccggaggttggtgtcccacgaggtggtgctg
ggcggcaagttggctgccaagaccagtttctcgctcagccgccccagcagtccccgcgtg
gaggacctcaaaggcgtcgccctgtacggccgcctcaaggactacctgctcagcgaggac
cagctgcaggagaatggcttccctttcccgcaccccgagcggccggggggcgccgtcctc
ttcacggccgaggagaagaagcccaaggactcctcttgcaggatctgctgccgctgcggg
gccgagtacctggtgctgccgtcgggccgctgcgtccgccaggaggagtgtgtctaccac
tgggggcggctgcggcggaaccgggtggctggcggctgggagaaccagtacatgtgctgt
tccggggccgtgggctccaccggctgccaggtggccaagcaacacgtgcaggacggcagg
aaggaaaacctggaggggttcgtgaagaccttcgacaaggagctcgccgagggggcgcac
ccggggatctacgccctggactgtgagatgtcctacacgacctacggcctggagctgacg
cgcgtcaccgtggtggacaccgacatgcaggtggtgtacgacaccttcgtcaggcccgac
aacgagattgtggactacaacacgcggttctcgggggtgacggaggccgacctcgccgac
acgagcacctcgctccgcgacgtgcaggccgtcctgctcagcatgttcagctccgatacc
atcctcatcggacacagcctggagagtgacctgctggccttaaaggtcatccatagcacc
gtggtggacacgtccgtgctcttcccacaccgcctgggcctcccctacaagcgctcactg
cggaatcttatggctgactacctcaaacagattatccaggacaatgtggacgggcacagt
tccagcgaggatgccagcgcctgcatgcacctggtggtctggaagatccgcgaagacgcc
aagaccaagcggtga
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