Sorex fumeus (smoky shrew): 130022103
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Entry
130022103 CDS
T10594
Symbol
POLRMT
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130022103 (POLRMT)
Enzymes [BR:
sfum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130022103 (POLRMT)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
130022103 (POLRMT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_3
PPR_2
Motif
Other DBs
NCBI-GeneID:
130022103
NCBI-ProteinID:
XP_055968809
LinkDB
All DBs
Position
Unknown
AA seq
1227 aa
AA seq
DB search
MSALRWGWGAAGLGRVLRPLGRPGPPAHEGALDGSFWGCRRQSTATRCVQEPRKDWGHAE
LLEVLEARVRQLQAESVSTVTVAKKVSVAKKVSVAKKVSVAKKVSEKKLDVACPPPEEET
GDPWTQEPEAEVENPNVVVRKPERRRRPQLLLEPRLLDKELHQCLRRWTTESPSSPWEEQ
LAELLRDAPRRLSQELQQVPASTTARARLEAQQQRLLSFLQSCLLSGHLALAHHVLARQH
AKLRPPMLLTLPMYNTVMLGWARQGSFKELVYIFYMLKDAGLAPDLLSYAAALQCMGRLD
KDARTVQRCLEQMARDGLKLRELFAQPLSASEREAVLRAVRKAQPQFQPPAPAPVPRVRS
TSPLLAEVYAKNLPATYPKLHLPLKTLQELFQKQLRMEMATIVQVPSVDKAPQETKELLR
ARKTLKRLRAQWEEELLDALREAKDNHARLARQGHPSLLPYLSLINERDIVRLLLQTLHA
ISPHGESLMSMAQDLGLRVFNRYAVHRKVLSNQMQGLEQRYHQYLHLLASDSKVAAPCLP
RQHWESLGPPEPPHEQPWPLPVLVELGKQLAEMLVQAVHMPSSLTAGTQDPKRSIPVLYH
AYSFRSFRQIGILKPHPAFTELREAAAERMLTFEANEVPMLCPPLPWTSPHMGAFLLSPT
KLMRAMEGVSQHLHLLDSCPPQDLHGALDTVTQLGNCAWRVRGPVLDLVLELFTAKGCPR
LGVPAPASEAPRPPCTRLPPGTPPARKAELRREVARCLKVTREMHSLRADALYRLSLAQH
LRHQTFWLPHNMDFRGRTYPCPPHFNHLGSDLARALLEFAEGRPLGPQGLDWLKIHLVNL
TGFQKRASLQGRREFADKVMDDILDSADRPMTGRKWWMEADEPWQALACCMEIAKAVRSP
DPAAYVSHFPVHQDGSCNGLQHYAALGRDSVGAAAVNLVPSDLPQDVYSEVAAQVEVFRS
EDAKQGVRVAQVLDGFISRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELDDFPQEFVWEA
SHYLVRKVFSSLQEMFSGSRAIQNWLTETARLIAKSGSAVEWVTPLGIPIIQPYHVGCKV
LIGGGLQSLTISNSGDTNRRPNTLKQRNGFPPNFIHSLDSSHMMLTALHCYRKGLTFVSV
HDCFWTHAADVPVMNQVCREQFFRLHSHPILQNLSSFMTERFCTGPRAQRQPSKLGQLIK
LRKTLMAVPKRGTLNLAKVKGSTYFFS
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgctgcgttggggctggggcgctgcggggctggggcgggtcctgcggcccctg
ggccgccccgggcccccagcccacgaaggggctctggatggaagcttctggggctgcagg
agacagtcgacggccacccgctgtgtgcaggagccccgcaaagactggggccacgcggag
ctgttagaggtgctggaggcgcgggtgcggcagctgcaggccgagagtgtgtccaccgtg
acggtggccaagaaggtgtcggtggccaagaaggtgtcggtggccaagaaggtgtcggtg
gccaagaaggtgtcagagaagaagctggatgtcgcatgccccccgcccgaggaggagacc
ggggacccctggacgcaggaacccgaggcagaggtggagaatccgaacgttgtggtccgg
aaacccgagcggcgccgccgcccgcagctgctcctggagccccggctgctggacaaggag
ctgcaccagtgcctgcggcgctggaccaccgagtccccgagcagcccctgggaggagcag
ctggccgagctgctgcgggacgcgccgcggcggctgagccaggagctgcagcaggtgccc
gccagcaccaccgcgcgggcgcgcctggaagcgcagcagcagcgcctgctctccttcctg
cagagctgcctgctctcgggccacctggccctggcgcaccacgtgctggccaggcagcac
gccaagctgcggccaccaatgctgctcacgctgcccatgtacaacaccgtgatgctgggc
tgggcgcgccaggggtcgttcaaggagctggtctatatcttctacatgctgaaggacgcg
ggcctcgccccggatctgctctcctacgcggccgccctgcagtgcatgggacggctggac
aaagacgcacggacggtgcaaaggtgcctggagcagatggcccgggacgggctgaagctg
cgggagctgtttgcgcagccgctgagcgccagcgagcgcgaggccgtgctgagagccgtg
cgcaaggcccagccccagttccagccgcccgccccggccccagtcccgcgcgtgcgcagc
acctcccccctgctggctgaggtctatgccaagaacctgcccgcgacctaccccaagctg
cacctgccgctgaagacgctgcaggagctattccagaagcagctgcgcatggagatggcc
accatcgtgcaggtgccgtcggtggacaaggccccccaggaaaccaaggagctgctgcgg
gcgcggaagaccctgaagaggctgcgcgcgcagtgggaggaggagctgctggatgccctg
cgcgaggccaaggataaccatgccagactggcgcggcagggccacccgtccctgctgccg
tacctgagcctcatcaacgagcgggacatcgtgcggctgctgttgcagaccctgcacgcc
atttccccgcatggagagtccctgatgtccatggcccaggacctgggcctgcgggtgttc
aaccgctacgcggtacacaggaaagtcctcagcaaccagatgcaggggctggagcagcgc
taccaccagtacctgcacctgctggcttccgactcgaaggtggcggccccctgcctgccc
aggcagcactgggagtcgctggggccgcctgaaccgccccacgagcagccgtggcccctg
ccggtgctggtggagctgggcaagcagctggccgagatgctggtgcaggctgtccacatg
cccagcagcctgaccgctggtacccaggaccctaagcggagcattccagtgctgtaccac
gcttactccttccggagcttccgccagatcgggatcctgaagccgcacccggccttcacc
gagctgcgggaggcggccgccgagcgcatgctgaccttcgaggccaacgaggtgcccatg
ctgtgcccgccgctgccctggacgtcgccgcacatgggcgccttcctgctgagccccacc
aagctgatgcgcgccatggagggtgtgtcgcagcacctgcacctgctggacagctgcccg
ccgcaggacctgcacggcgccctggacaccgtcacccagctgggcaactgcgcctggcgc
gtgcgcgggcccgtgctcgacttggtgctggagctcttcaccgccaagggctgcccgcgc
ctcggcgtgcccgcgcccgcctccgaggcgccgcgcccaccctgcacccgcctgcccccc
ggcaccccgcccgcccgcaaggccgagctgcggcgcgaggtggcgcgctgcctgaaggtg
acccgcgagatgcacagcctgcgggccgacgcgctctaccgcctctcgctggcccagcac
ctgcgccaccagaccttctggctgcctcacaacatggacttccgcggccgcacctacccc
tgcccgccccacttcaaccacctgggcagcgacctggcccgcgccctgctggagttcgcc
gagggccgcccgctcggcccccagggcctcgactggctcaagatccacctggtcaacctc
acgggcttccaaaagcgagcgtccctgcagggccgccgcgagttcgccgacaaggtcatg
gacgacatcctggactcggccgaccggcccatgacaggccggaaatggtggatggaagcc
gacgagccctggcaagccctggcctgctgcatggagatcgccaaggccgtgcgctcccct
gaccccgcggcttacgtgtcccactttcccgtgcaccaggatggctcctgtaacggcctg
cagcattacgcagccctgggccgcgacagcgtgggagccgccgctgtcaatctggtgcca
tcagacctgccccaggatgtgtacagcgaggtggctgcgcaggtggaagtgttccgctcg
gaggacgccaagcagggcgtgcgggtggcccaggtgctggacggcttcatcagccgcaag
gtggtgaagcaaacggtcatgaccgtggtctacggcgtcacgcgctatgggggccgcctg
cagatcgagaagcgcctccgcgagctcgacgacttcccgcaggagttcgtgtgggaagcg
tctcactacctcgtgcgcaaggtcttcagcagcctccaggagatgttctcgggctcccgg
gccatccagaactggctgacggagaccgcgcgcctcatcgccaagtccggctcggcggta
gagtgggtcacgcccctgggtatccccatcatccagccctaccacgtgggctgcaaggtc
ctgatcggcggcggcctccagagtctcaccatcagcaacagcggcgacaccaacaggaga
cccaacacgctgaagcaaaggaacggcttcccccccaacttcatccactccctggactcc
tcgcacatgatgctcacggccctacactgctacaggaagggtctgaccttcgtgtctgtc
catgactgtttctggacccacgccgcggacgtccccgtcatgaaccaggtgtgccgggag
cagttcttccgcctgcacagccaccccatcctgcagaacctgtcgtccttcatgaccgag
cgcttctgcactggccccagggcccagcgccagccctcgaagctcggccagctgatcaaa
ttgcgcaagacgctgatggcggtgcccaagagagggactctgaacctggccaaggtcaaa
ggctccacttacttcttcagctga
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