KEGG   Sorex fumeus (smoky shrew): 130022134
Entry
130022134         CDS       T10594                                 
Symbol
POLR2E
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03020  RNA polymerase
sfum03420  Nucleotide excision repair
sfum04623  Cytosolic DNA-sensing pathway
sfum05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130022134 (POLR2E)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130022134 (POLR2E)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    130022134 (POLR2E)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    130022134 (POLR2E)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfum03021]
    130022134 (POLR2E)
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130022134 (POLR2E)
Transcription machinery [BR:sfum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     130022134 (POLR2E)
  RNA polymerase III system
   RNA polymerase III
     130022134 (POLR2E)
  RNA polymerase I system
   RNA polymerase I
     130022134 (POLR2E)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130022134 (POLR2E)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 130022134
NCBI-ProteinID: XP_055968854
LinkDB
Position
Unknown
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaggaggagacgtaccggctgtggaagattcgcaagaccatcatgcagctg
tgtcatgaccggggctacctggtgacccaggacgagctggaccagacgctggatgaattc
aaggcgcagttcggggacaagccgagcgaggggcggccgcggcgcacggacctcaccgtg
ctggtggcccacaatgacgaccccaccgaccagatgttcgtcttcttccccgaggagccc
aaggtgggcatcaagaccatcaaggtctactgccagcgcatgcaggaggagaacatcacc
cgcgccctcatcgtggtgcagcagggcatgacgccctccgccaagcagtccctggtcgac
atggcccccaagtacatcctggagcagttcctgcagcaagagctactcatcaacatcacg
gagcacgagctggtcccagagcacgtggtcatgaccaaggaggaggtgacggagctgctg
gcccggtataagctccgtgagaaccaactgcccagaatccaagccggggaccccgtggca
cgctacttcggcataaagcggggccaggtggtgaagatcatccggcccagcgagaccgcc
ggcaggtacatcacgtaccgcctggtacagtag

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