Sorex fumeus (smoky shrew): 130022416
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Entry
130022416 CDS
T10594
Symbol
HNRNPM
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein M isoform X1
KO
K12887
heterogeneous nuclear ribonucleoprotein M
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130022416 (HNRNPM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfum03041
]
130022416 (HNRNPM)
Spliceosome [BR:
sfum03041
]
Common components
Common spliceosomal components
hnRNP proteins
130022416 (HNRNPM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MARF1
Collagen_mid
RRM_5
RBD_DEAH11
RRM_3
Motif
Other DBs
NCBI-GeneID:
130022416
NCBI-ProteinID:
XP_055969146
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MEESMKKAAEVLNKHSLSGRPLKVKEDPDGEHARRAMQKVMAATGGMGMGPGGPGMINIP
PSILNNPNIPNEIIHALQAGRLGSTVFVANLDYKVGWKKLKEVFSMAGVVVRADILEDKD
GKSRGIGTVTFEQSIEAVQAISMFNGQLLFDRPMHVKMDERALPKGDFFPPERPQQLPHG
LGGIGMGLGPGGQPIDANHLNKGIGMGNLGPAGMGMEGIGFGINKMGGMEGPFGGGMENM
GRFGSGMNMGRINEMERGMGGGFERNFARPEMGMSRSFGEPLGRGVEILSNALKRGEIIA
KQGGGGGGGSVPGIERMGPGIDRLGGAGMERMGAGLGHGMERVGSEMERMGLVMDRMGSV
ERMGAGIERMGPLGLDHMASSIERMGQTMERIGSGVERMGAGMGFGLERMAAPLDRVGQT
IERMGSGVERMGPAIERMGLSMERMVPAGMGAGLERMGPVMERMATGLERMGANNLERMG
LERMGANSLERMGLERMGANSLERMGPAMGPALGAGIERMGLAMGGGGGGAGFDRAIEME
RGNFGGSFAGSFGGAGGHAPGVARKACQIFVRNLPFDFTWKMLKDKFNECGHVLYADIKM
ENGKSKGCGVVKFESPEVAERACRMMNGMKLSGREIDVRIDRNA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcatgaaaaaagccgctgaagttctaaacaagcatagtctgagtggaagg
ccactgaaagtcaaagaagatcctgatggtgaacatgccaggagagcgatgcaaaaggtg
atggctgcgactggtgggatgggtatgggaccaggtggcccaggaatgattaatatccca
cccagtatcctaaataatcctaacatcccaaatgagattatccatgcattacaggctgga
agacttggaagcacagtatttgtagcaaacctggattataaagttggctggaagaaattg
aaggaagtttttagtatggctggtgtggtggttcgagcagacattcttgaggataaagat
gggaaaagtcggggaataggcactgttactttcgagcagtccatcgaggcagtgcaggcc
atatctatgtttaacggccagctgctatttgacagaccaatgcatgtgaaaatggatgag
agggccttaccgaagggagattttttccctcctgagcggccacagcaacttccccatgga
cttggtggcattggcatggggctgggaccaggaggacaacctatcgatgccaatcacctg
aacaaaggcattggaatgggaaacctggggcccgcaggaatgggaatggaaggcatagga
tttggaataaataaaatgggaggcatggagggcccctttggcggtggcatggagaacatg
gggcgatttggctctggaatgaacatgggcagaatcaacgagatggagcgtggcatgggt
ggaggatttgagagaaactttgccagacccgagatgggaatgtctcgaagctttggagag
ccccttggcagaggagtggaaatcctaagtaatgcactgaagagaggagagatcattgca
aagcagggaggaggtggcggcggaggcagcgtgcccgggatcgagcggatgggccccggc
atcgaccgcctcgggggcgccggcatggagcgcatgggcgcgggcctgggccacggcatg
gagcgcgtgggctcggagatggagcgcatgggcctggtcatggaccgcatgggctcggtg
gagcgcatgggcgccggcatcgagcgcatgggccccctggggctcgaccacatggcctcc
agcatcgagcgcatgggccagaccatggagcgcatcggctcgggcgtggagcgcatgggg
gccggcatgggcttcggcctggagcgcatggccgcgcccctcgaccgcgtgggccagacc
atcgagcggatgggctcgggcgtggagcgcatgggcccggccatcgagcgcatgggcctg
agcatggagcgcatggtgcccgcgggcatgggggccggcctggagcgcatgggccccgtg
atggagcgcatggccaccggcctggagcgcatgggcgccaacaacctggagcgcatgggc
ctggagcgcatgggcgccaacagcctggagcgcatgggcctggagcgcatgggcgccaac
agcctggagcgcatgggccccgccatgggcccggccctgggcgccggcatcgagcgcatg
ggcctcgccatgggcggcggcggcggcggcgccggctttgaccgcgccatcgagatggag
cgcggcaatttcggaggcagcttcgcgggctctttcggtggcgctggaggccacgcgccg
ggggtggccaggaaggcctgccagatctttgtgagaaacctcccgtttgattttacatgg
aagatgctaaaagacaaattcaatgaatgtggccatgtgctctacgccgacatcaagatg
gagaatgggaagtcgaaggggtgcggtgtggtgaagtttgagtcgcccgaggtggccgag
cgggcctgccggatgatgaatggaatgaagctgagtggccgggagatcgatgttcggatc
gatcgaaacgcttaa
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