Sorex fumeus (smoky shrew): 130022578
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Entry
130022578 CDS
T10594
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130022578 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130022578 (SEC24C)
Membrane trafficking [BR:
sfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
130022578 (SEC24C)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
130022578
NCBI-ProteinID:
XP_055969304
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSVNQSAPPVPPFGQPQPVYPGYHQSSYGGQPGSTVPPPPYGAFNGPVSAYQQTPPPGVS
RVPPSSGVPPTSTAQAPCGQAAYAQFGQGDVQNGPSSAVQMQRLPGPQPFGASPSAPVSQ
PAPPAYGPPPTSAQVTAQLAGMQIGGAAAPALAPGGLGYGPPAPLASASGSFPSSGLYGS
YPQGQAPPLSQAQGHPGALPPPQPAPPQSSSFAPVPSGAPRMPSMAGPLLPGQGFGGPPV
SQPNHVSSPPPQALPPGTPLSGAPGPPPPPMHSSQQPGYQLQQNGSFGPARGPQPSYGSP
YPGTSTFGSQPGPPQPLPPKRLDPDAIPSPPFNELPPQQKTRHRIDPDAIPSPIQVIEDD
RNNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLA
AVIKPLARLPPEEASPYVVDHGESGPVRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDV
PPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIR
SGLVRLLCEELKSLLDFLPRDGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDV
ADMFVPLLDGFLVNVNESRAVINSLLDQIPEMFVDTRETETVFAPVIQAGMEALKAAECA
GKLFLFHTSLPVAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDL
FLFPNQYVDVATLSVVPQLTGGSVYKYACFQVENDQERFLSDLRWDVQKVVGFDAVMRVR
TSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSC
AGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLSSPVKTVRDTLVAQCA
QILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVT
SMDVAETNVFFYPRLLPLTKSPIESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGAS
VQQGVVQSLFSVSSFSQIVSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLIVVKQED
KLEMLFKHFLVEDKSLNGGASYVDFLCHMHKEIRQLLS
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttaaccagtcagcgccacctgtgccgccatttgggcagccccagcctgtctac
ccggggtaccatcagtccagttatggtgggcagccaggatccactgttcctcctcctccc
tatggagccttcaatggcccggtatcagcctatcagcagacacctcccccaggtgtgtcg
agggtcccaccttcttcaggggtgcctccaacctccacagcacaggccccttgtggccag
gctgcatatgctcagtttggccaaggagatgtgcagaatggcccgagctccgctgttcag
atgcaaaggctccctgggcctcagccgttcggggccagcccatctgccccagtcagccag
cccgccccgcctgcctatggccctccgcccacaagtgcccaggtgaccgctcagctggcc
gggatgcagatcggcggcgctgcagccccagccctggccccgggagggctgggctatggc
cccccagcgcctctggcctccgcctcagggagttttcccagctcgggtctgtacggctcc
taccctcagggccaggctcctcccctgagccaggctcagggacaccccggagccctgccg
cccccacagccagccccaccgcaatcctccagcttcgcaccggtaccgtctggggctcct
cggatgccatcaatggctggcccactcctgcctggacagggttttggagggccaccagtg
agccagcccaaccatgtgtcctcaccccctcctcaagctctgccccctgggaccccactg
agtggggccccgggacccccgccaccgcccatgcactcctcccagcagccaggctatcag
ttgcagcaaaatggttcctttggaccagcccggggccctcagcccagctacggaagcccc
tacccgggcacatccacatttggcagtcagcccggaccccctcagccactgccgcctaag
cgcctggaccccgatgctatcccgagtcctccattcaatgagctgcctcctcagcagaaa
accaggcacagaatagaccctgatgccattcctagtccaattcaggtcattgaggatgac
aggaacaaccggggctccgagccatttgttaccggagtacggggccaggtgccaccctta
gtcaccaccaacttcctggtgaaagaccaagggaatgcaagtccccgatacatccggtgc
acatcctataacatcccctgcacatctgatatggctaagcaggctcaggtaccactggca
gctgtcatcaagccactggcaagactgcccccggaggaggcctcaccatatgtggtcgac
catggggaatctggtcctgtgcgctgcaatcgctgcaaagcatacatgtgccccttcatg
cagttcatcgagggagggaggcgcttccagtgctgcttctgcagctgcatcaatgatgtt
ccccctcagtattttcaacatctggaccataccggcaaacgtgtggatgcttatgaccgt
cctgagctatcccttggctcttatgaattcttggccactgtagattactgcaagaacaat
aagttccccagccctcccgccttcatcttcatgattgacgtctcctacaatgccatcagg
agtggtctcgttaggctcctctgtgaggagctcaaatcactgttagactttctccccaga
gatggcggggcagaagagtcagcaatccgtgttggctttgtcacctataataaggtgctc
catttctacaatgtgaagagctcgttggcccagccacagatgatggttgtgtctgatgtg
gcagacatgtttgtgcccctgctggatggcttcctggtcaacgtcaatgagtctcgggca
gttatcaacagcttattggatcagattccggaaatgtttgtagacacgagggagacggag
acagtatttgccccagttatccaggctgggatggaggccctgaaggccgctgagtgtgcg
gggaagctgtttctcttccacacctccctgcctgttgcggaggccccagggaaactgaag
aacagagacgacaggaaattgatcaacacagacaaggaaaagactctgttccagcctcag
accggtgcctatcaaaccctggccaaagagtgtgtggcccaaggctgctgtgtagacctc
ttcctcttccctaatcagtatgtggatgtggccacgctctctgttgtgccccagctcact
ggtggctctgtctacaaatatgcttgctttcaggtggagaatgaccaggaacggttcctg
agtgacttgcgttgggacgtacagaaggtcgttggctttgatgctgtgatgcgggtccgg
acaagcactggtatccgtgctgtcgatttctttggggctttctacatgagcaacacaaca
gatgtggagctggcagggctggacggggacaagacggtgactgtggagttcaagcatgat
gaccggctgaatgaagagagtggcgctctcctgcagtgtgccctgctctacaccagctgt
gcgggacagcgacgtctccgtatccataatctggcactgaactgctgcacccagctggct
gatctgtatcgaaactgtgagactgacacactcatcaactacatggccaagtttgcatac
cggggggtcctgagcagccctgtgaaaactgtccgtgacacgctcgtcgcccagtgtgcc
cagatcctggcctgttaccgtaagaactgtgccagtccctcctctgcaggacagttgatc
cttcctgagtgcatgaagctactcccagtttacctgaactgtgtgttgaagagtgatgtt
ctgcagcctggagccgaggtcaccacggatgaccgtgcctatgtccgacagctggtgacc
tccatggatgtggccgagactaatgtcttcttctatcctcgtctcctcccactgacaaag
tctcccattgagagcaccacagaaccaccagcagttcgagcatctgaagagcgtctaagc
aatggggatatatatttgctggagaatgggctcaacctcttcctctgggtgggagccagt
gtccaacagggcgttgtccagagtctcttcagtgtctcctccttcagtcagatcgtcagt
ggcttgagtgttctgccagttctggataatccattgtccaagaaggttcgaggcctcatt
gacagcttaagggcacagcgatcacggtacatgaagctgatcgtggtaaaacaggaggac
aagctggagatgctcttcaagcacttcctggtggaagacaagagcctgaatggaggagcg
tcctatgtggactttctctgccacatgcacaaagaaattcgacaactactgagctag
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