Sorex fumeus (smoky shrew): 130022640
Help
Entry
130022640 CDS
T10594
Symbol
HERC4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130022640 (HERC4)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
HECT type E3
130022640 (HERC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130022640
NCBI-ProteinID:
XP_055969378
LinkDB
All DBs
Position
Unknown
AA seq
1057 aa
AA seq
DB search
MLCWGNASFGQLGLGGIDDEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVYCWGQNKYGQLGLGIDCIKQTS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
TQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQIA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQYVPGIDLEE
HFCVKRIFSGGDQSFSHYSNPQNCGPPDDFRCPDPSKQIWTVNEALIQKWLSYPSGRVPV
EIANEIDGTFSSSGCLNGSFLAISNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNERTGQIIQYDKFYIHEVQELIDIRNDYINWVQQQAYGMDVNHGLTELADVPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKKKPSLDDLKELVPD
IGRSLQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVPNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLQLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGEEYLP
VSHTCFNLLDLPKYSEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcttttggacaactaggtttgggtggaattgacgatgaa
attgtactagagcccaggaaaagtgacttttttataaataaaaaggtccgagatgtagga
tgcggactgagacacacggtgtttgttctggatgatggaacagtatacacttgtggatgt
aatgatctaggacaactagggcatgaaaagtccagaaagaaaccagagcaggttgttgcc
ctggatgctcaaaatatcgtagctgtttcatgtggagaagctcacacattagcactaaat
gacaagggccaggtgtatgcttggggtctcgattctgatggacaacttggcctgctagga
tcagaggaatgtatcagagtaccaaggaatataaaaagtttgtccgatattcagatagta
caagttgcatgtggctactatcattcacttgcactttctaaagcgagtgaagtctactgc
tggggacagaataaatatggccagttgggtttaggcattgactgtataaagcagacttcg
ccacagctgatcaaatccttacttggaatccctttcatgcaagttgcagcaggaggagcc
catagttttgtactcacactttctggagctatctttggatggggacgcaacaagtttggt
cagcttggacttaatgatgaaaatgatagatatgttcctaacttactgaagtcattaaga
actcagaaaatagtttatatttgttgtggagaagaccatactgctgcacttaccaaggaa
ggtggtgtgtttacttttggagctggagggtatggtcagttgggtcataactctactagt
catgaaataaatcccaggaaagtttttgaacttatgggaagcattgtcactcagattgct
tgtggaaggcagcacacttctgcttttgttccttcatcaggacgaatttattcttttgga
ctaggtggtaatgggcagctaggaactggttcaacaagcaaccggaaaagtcctttcact
gtaaaaggaaattggttcccgtataatgggcagtatgtgccaggtattgatcttgaagaa
catttctgtgtgaaaagaattttttcaggtggagatcaaagcttttcacattactctaat
ccccagaactgtggaccaccagatgactttagatgtcctgatccttcaaagcaaatctgg
actgtgaatgaagctctaattcaaaaatggctgagctacccctctggcagggttcctgtg
gagatagccaatgaaatagatgggacgttttcttcttctggctgcctaaatggaagtttt
ttagctattagtaatgatgatcattataggacaggaaccagattttcaggagttgatatg
aatgctgctagacttttatttcacaaacttatacagcctgatcatcctcagatatctcaa
caggtggcagctagtttggaaaagaatcttattcctaaactgactagctccttacctgat
gttgaagcactgaggttttatcttactctaccagaatgtcccctgatgagtgattccaac
aatttcacaacaatagcaattccctttggtacagctcttgtgaatctagaaaaagcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactattcctcaagatagta
gaactttttaaggaagttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcatactgcattaaaggttttagaaatattg
catagggtaaatgaaagaacgggacagattatacagtatgacaaattttatatacatgaa
gtacaagagttgatagacataaggaatgattatatcaactgggtccaacaacaggcttat
ggaatggatgtcaaccatggattaactgagttggcagatgtccctgttacaatttgcaca
tatccatttgtatttgatgcccaagcaaaaactaccctgttacaaacagacgcagtctta
caaatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgaatctgtgaatccctgcctgattctagtagtgcgtagagagaatattgtaggg
gacgcaatggaagtccttaggaaaaccaagaatatagactacaaaaagcctctcaaggtt
atatttgttggagaagatgctgttgatgcaggaggagtgcgcaaagaatttttcttgctc
atcatgagggaattactagatcctaaatatggcatgtttaggtattatgaagattccagg
ctcatttggttttctgataagacatttgaagacagtgatttgttccatctaattggtgtt
atctgtgggttagcaatttataactttactatcgtggaccttcactttcctttggcgtta
tataaaaaattgctgaaaaagaagccatccctggatgacttgaaagaactagtgcctgat
attgggagaagcttgcagcagttactagattatccagaagatgatatagaggaaacattt
tgtcttaattttacgatcacagtggaaaactttggtgcgacagaagtgaaggagctggtt
cccaatggtgcagacacggccgttaacaaacagaatcggcaggagtttgttgatgcttat
gtggattacatattcaacaaatcagtggcttccttgtttgatgctttccatgcgggcttt
cataaggtttgtggaggaaaagtgcttcagctcttccagcctaacgagctacaagcaatg
gttattggaaatacaaattacgattggaaggaattggaaaagaatacagaatataaaggg
gaatattgggcagagcatcctacaataaaaattttttgggaagtatttcatgaattacca
ttggaaaagaaaaaacagtttctgttatttttaacaggtagcgatcgcattcctatcctt
ggcatgaagagcttgaaactagtcatccagtcaacaggaggcggtgaggaataccttcct
gtttcccatacctgttttaatcttctggatcttccaaaatactcagaaaaagaaactcta
cgatctaaactgatccaagctatagatcacaatgaaggcttcagtttaatataa
DBGET
integrated database retrieval system
