Sorex fumeus (smoky shrew): 130022696
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Entry
130022696 CDS
T10594
Symbol
VCL
Name
(RefSeq) vinculin isoform X1
KO
K05700
vinculin
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04510
Focal adhesion
sfum04520
Adherens junction
sfum04670
Leukocyte transendothelial migration
sfum04810
Regulation of actin cytoskeleton
sfum04820
Cytoskeleton in muscle cells
sfum05100
Bacterial invasion of epithelial cells
sfum05146
Amoebiasis
Brite
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130022696 (VCL)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130022696 (VCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130022696
NCBI-ProteinID:
XP_055969460
LinkDB
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Position
Unknown
AA seq
1066 aa
AA seq
DB search
MPVFHTRTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTAPVAAVQAAVSNLVRVGKE
TVQTTEDQILKRDMPPAFIKVENACTKLVQAAQMLQSDPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAMKIFVTTKNSKNQGIEEALKNRNFTVEKMSTE
INEIIRVLQLTSWDEDAWASKDTEAMKRALASIDSKLNQAKGWLRDPGASPGDAGEQAIR
QILDEAGKVGELCAGKERREILGTCKMLGQMTDQVADLRARGQGASPVAMQKAQQVSQGL
DVLTAKVENAARKLEAMTNSKQSIAKKIDSAQNWLADPNGGPEGEEQIRGALTEARKIAE
LCDDPKERDDIMRSLGEISALTSKLTDLRRQGKGDSPEARALAKQVATALQNLQSKTNRA
VANSRPTKAAVHLEGKIEQAHRWIDNPTVDDRGVGQAAIRGLVAEGHRLANVMMGPYRQD
LLAKCDRVDQLTAQLADLAARGEGESPQARALASQLQDSLKDLKAQMQEAMTQEVSDVFS
DTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHSGRLGATAEKAAAVGTANKSTVEG
IQASVKTARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDTK
SLLDASEEAIKKDLDKCKVAMANIQPQMLVAGATSIARRANRILLVAKREVENSEDPKFR
EAVKAASDELSKTISPMVMDAKAVAGNISDPGLQKSFLDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLDQLRLADELAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEVINQPMMM
AARQLHDEARKWSSKGNDIIAAAKRMALLMAEMSRLVRGGSGTKRALIQCAKDIAKASDE
VTRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISDEESEQAT
EMLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLRWVRKTPWYQ
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttccacacgcgcacgatcgagagcatcctggagccggtggcgcagcagatc
tcgcacctggtgatcatgcacgaggagggcgaggtggacggcaaagccatccctgacctc
accgcgcccgtcgccgccgtgcaggcggccgtcagcaacctggttcgggttggaaaagag
actgttcagacgacagaggatcagatcttgaagagagatatgccaccagcatttattaag
gttgagaacgcttgcaccaaactggtccaggctgcccagatgctgcagtcagacccttac
tcagtgcccgcgcgggattatctcattgatgggtcaaggggaatcctctctggcacgtca
gacctgctcctcaccttcgacgaggctgaggtgcgtaaaattattcgagtttgcaaagga
attttggaatatcttacagtggcagaggtggtggagactatggaagatttagttacttac
acgaagaatcttgggccaggaatgactaagatggccaaaatgatcgacgagaggcagcag
gagctgacacaccaggagcatcgagtgatgctggtgaactcaatgaacaccgtcaaagag
ttactgccggttctcatttcagctatgaagatttttgtaacaactaaaaactcaaaaaac
caagggatagaagaagctttgaaaaatcgcaattttactgtagaaaagatgagtactgaa
atcaatgagatcatccgggtgttgcagctcacatcttgggatgaagatgcgtgggccagc
aaggacactgaagccatgaagagagcattggcctccatagactccaaactgaaccaggcc
aaagggtggctccgtgaccccggcgcctccccaggggatgctggcgagcaggccatcaga
cagatcttagatgaagctgggaaagttggtgagctctgcgcaggcaaagagcgcagggag
atcctcggaacttgcaaaatgctggggcagatgaccgatcaagtggctgacctccgagcc
agaggacaaggagcctcccctgtggccatgcagaaagcccagcaggtgtcccaggggctg
gacgtgctcactgcgaaggtggagaatgccgcccgcaagctggaagccatgacaaactca
aagcagagcattgcgaagaagatcgactccgctcagaactggcttgcagatccaaacggg
gggccagaaggggaagaacagattcgaggggctttgactgaagctcggaaaatagcggaa
ttatgtgatgatccaaaagagagggatgacatcatgcgttctcttggagagatttctgct
ctgacttctaaattaacagacctgcgcagacaggggaaaggagattccccagaggcccga
gcactggccaaacaggtggccactgccttgcagaacctgcagagcaaaaccaatagggcc
gtggccaacagcaggcccaccaaggctgctgtccatcttgagggcaagatcgagcaagca
catcggtggattgataaccccacagtggacgaccggggagttggtcaggctgccatccgg
gggctggtggctgaagggcatcggctggctaatgtcatgatgggaccttatcgccaagat
cttcttgcaaagtgtgaccgcgtggatcagctgacagctcagctggccgatctggctgcc
agaggggaaggggagagcccccaggctagagcactggcgtctcagcttcaggattcattg
aaggacctgaaagcccagatgcaggaggccatgacccaggaggtgtcagatgtcttcagt
gataccacaacccccatcaagctgctggcggtggcggccactgcccctcccgatgctccc
aacagggaagaggtgttcgacgaaagggcagctaactttgagaaccactcaggccggctt
ggtgccacagcagagaaggcagccgctgttggaacagcaaataagtcgacagtggaaggt
atccaggcgtcggtgaagaccgcccgagaactcactcctcaggtcgtctcagctgcccgc
atcttacttaggaaccctggaaaccaggctgcttacgaacactttgagaccatgaaaaac
cagtggatcgataatgtggagaagatgacagggttggtggacgaagccatcgacaccaag
tctctgttggatgcttccgaagaagcgattaaaaaagacctggacaagtgtaaagtggcc
atggctaacattcagccgcagatgctggtcgcaggggcaaccagcatcgctcgcagggcc
aaccggatcctgctggtggccaagagggaagtggagaactcggaggaccccaagttcagg
gaggccgtgaaagccgcctcggatgagctgagtaaaaccatctcgccaatggtgatggat
gccaaggctgtggcaggcaacatctctgacccaggtctgcagaagagcttcctggactcg
ggataccggatcctgggagcagtcgccaaggttcgagaagccttccagcctcaggagccc
gacttccccccgccgccaccagacctcgaccagctccgattggcagatgagcttgctcct
cccaaaccacctctgcctgagggtgaagttcctccgcccaggcccccgccgcccgaggag
aaggatgaggagttccctgagcagaaagccggggaggtgatcaaccagcccatgatgatg
gctgccaggcagctccatgatgaagcccgaaaatggtccagcaagggcaatgacatcatt
gcagcagccaagcgcatggctctgctgatggctgagatgtctcggctggtaagagggggc
agcggcaccaagcgggcactgatccagtgtgccaaggacattgccaaagcctccgatgag
gtgactcggttggccaaagaagttgccaagcagtgcacggataagcggattagaaccaac
ctcttgcaggtgtgtgaacgaattcccaccatcagcacccagctcaaaatcctgtcgaca
gtgaaggccaccatgctgggccggaccaacatcagcgatgaggagtccgagcaggccaca
gagatgctggttcacaatgcccagaacctcatgcagtctgtgaaggagaccgttcgtgaa
gcggaagcagcttcaatcaaaatccgaacagatgctgggttcacactgcgttgggttcga
aagactccctggtaccaataa
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