Sorex fumeus (smoky shrew): 130022738
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Entry
130022738 CDS
T10594
Symbol
KCNMA1
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1 isoform X1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04022
cGMP-PKG signaling pathway
sfum04270
Vascular smooth muscle contraction
sfum04911
Insulin secretion
sfum04924
Renin secretion
sfum04970
Salivary secretion
sfum04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04022 cGMP-PKG signaling pathway
130022738 (KCNMA1)
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
130022738 (KCNMA1)
04924 Renin secretion
130022738 (KCNMA1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
130022738 (KCNMA1)
09154 Digestive system
04970 Salivary secretion
130022738 (KCNMA1)
04972 Pancreatic secretion
130022738 (KCNMA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfum04040
]
130022738 (KCNMA1)
Ion channels [BR:
sfum04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130022738 (KCNMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
130022738
NCBI-ProteinID:
XP_055969522
LinkDB
All DBs
Position
Unknown
AA seq
1277 aa
AA seq
DB search
MANGGGGGLRMSSHIRAHHLSLDASSSSSSSSSSASSSSSSSSSAAVHEPKMDALIIPVT
MEVPCDSRGQRMWWAFLASSMVTFFGGLFIILLWRTLKYLWTVCCHCGGKTKEAQKINNG
SSQADGTLKPADEKEEAVAAEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVI
YFIDSSNPIESCQNFYKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFT
VPPVFVSVYLNRSWLGLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLLSIFISTWLTA
AGFIHLVENSGDPWENFQNNQALTYWECVYLLMVTMSTVGYGDVYAKTTLGRLFMVFFIL
GGLAMFASYVPEIIELIGNRKKYGGSYSAVSGRKHIVVCGHITLESVSNFLKDFLHKDRD
DVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKY
CADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAEL
KLGFIAQSCLAQGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSAFVGLS
FPTVCELCFVKLKLLMIAIEYKSANRESRSRKRILINPGNHLKIQEGTLGFFIASDAKEV
KRAFFYCKACHDDITDPKRIKKCGCKRLKGEARSRYLRDPFEFKIAAHNSRLVTEPVEDE
QPSSLSPKKKQRNGGMRNSPSTSPKLMRHDPLLIPGNDQIDNMDSNVKKYDSTGMFHWCA
PKEIEKVILTRSEAAMTVLSGHVVVCIFGDVSSALIGLRNLVMPLRASNFHYHELKHIVF
VGSIEYLKREWETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDTSLQ
DKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNI
PIITELAKPGKLPLVSVNQEKNSGTHILMITELVNDTNVQFLDQDDDDDPDTELYLTQPF
ACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATPELEALIAEENALRGGYSTPQTL
ANRDRCRVAQLALLDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLSTPSQCT
KRYVITNPPYEFELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSQSSSKKSSSVHSIPST
ANRQNRPKSRESREKQNATRMNRMGQAEKKWFTDEPDNAYPRNIQIKPMSTHMANQINQY
KSTSSLIPPIREVEDEC
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatggtggcggcggcggcctgaggatgagcagccacatccgcgcgcaccacctc
agcctagacgcgtcctcctcctcctcctcctcctcctcctcggcctcctcctcctcctcc
tcttcctcctcggccgcggtccacgagcccaagatggatgcgctcatcatcccggtgacc
atggaggtgccgtgcgacagccggggccagcgcatgtggtgggctttcctggcctcgtcc
atggtgactttcttcgggggcctcttcatcatcctgctctggcggacgctcaagtacctg
tggaccgtttgctgccactgcgggggcaagacgaaggaggcccagaagatcaacaacggc
tcaagccaggcggatggcacgctcaagccagcagatgagaaagaggaggcagtagcagcc
gaggtcggctggatgacctcggtgaaggactgggcgggcgtgatgatatctgcccagacg
ctgaccggcagagtcctggttgtcttggtctttgctctcagcattggtgcacttgtaata
tacttcattgattcttccaacccaatagaatcctgccagaatttctacaaagatttcaca
ttacagatcgacatggctttcaacgtcttcttccttctctactttggcttgcggtttatt
gcagccaatgataagctgtggttctggctggaagtgaactctgtagtagatttcttcaca
gttcccccggtatttgtgtctgtgtacttaaacagaagctggcttggcctgagattttta
cgagctctccgactgatacagttttcagagattttgcagtttctgaatattcttaaaaca
agcaattccatcaagctggtgaatctgctctctatttttatcagcacgtggcttacggcg
gccggcttcatccacctggtggagaattccggggacccatgggagaacttccagaacaac
caggcactcacctactgggaatgtgtctatctactcatggtcaccatgtccaccgttggt
tatggggatgtttatgcaaaaaccactcttgggcgcctcttcatggtcttcttcatcctc
gggggactggccatgtttgccagctacgtccctgaaatcatagagttaataggaaaccgc
aagaaatacgggggctcctatagtgcggttagtggaagaaagcacattgtggtctgtgga
cacatcaccctggagagtgtttccaacttcctgaaggactttctgcacaaggaccgggat
gatgtcaatgtggagattgtctttcttcacaacatttccccaaacctggagctggaagca
ctgttcaaacggcacttcactcaggtggaattttaccagggttcagtcctcaatccacac
gatctggctagagtcaagatagagtcagcagatgcctgcctaatccttgccaataagtac
tgcgctgacccggatgctgaagatgcttccaatatcatgagagtaatctccataaagaac
taccatccgaagataagaatcatcactcagatgctgcagtaccacaacaaggcccatctg
ctaaacattccaagctggaattggaaagagggtgatgatgcaatctgccttgcagaactc
aagctggggttcatagcccagagctgcctggcccaaggcctctccaccatgctcgccaac
ctcttctccatgaggtcattcataaagattgaggaagacacgtggcagaaatactatttg
gaaggagtttcaaatgaaatgtacacagaatatctttccagtgccttcgtgggtctgtcc
ttccctactgtttgtgagctgtgttttgtgaagctcaagctcttaatgatagccattgag
tataagtccgccaaccgtgagagtcgaagccgaaagcgtatattaattaatcctggaaat
catcttaagatccaagaaggtactttaggatttttcatcgcaagtgatgccaaagaagtt
aaaagggcatttttttactgcaaggcctgtcatgatgacatcacagatcccaaaagaata
aaaaaatgtggctgcaaacggctcaagggtgaagctagatcacgctatctcagagatcca
tttgagttcaagatcgcagctcacaattctcggcttgtgactgagccagttgaagatgaa
cagccgtcaagtctgtcacccaaaaaaaagcagcggaatggaggcatgaggaactccccc
agcacctcgcccaagctgatgaggcatgaccctttgttaattcctgggaatgatcagatt
gacaacatggactccaatgtcaagaagtatgactctacagggatgttccattggtgtgca
cccaaggagatagagaaggtcatcctgactcgaagcgaagccgctatgacagtcctgagt
ggccacgtggtggtctgcatctttggagatgtcagctcagccctgatcggccttcggaac
ctggtgatgccacttcgtgccagcaacttccattaccacgagctcaaacacatcgtgttt
gtgggctccattgagtacctcaagcgagagtgggagacacttcacaacttccctaaagtg
tccatattgcctggtacgccattaagtcgggctgatttaagggccgtcaacatcaacctc
tgtgacatgtgcgttatcctgtcagccaatcagaataatattgatgatacttcgctgcag
gacaaggaatgcatcttggcgtcactcaacatcaaatctatgcagtttgatgacagcatc
ggggtcttgcaggctaattcccaagggttcacccctccaggaatggacagatcctctcca
gacaacagcccagtgcatgggatgttacgccagccatccatcacaactggggtcaacatc
cccatcattacagaactagctaagcctggcaagttgcctttggtatcagtcaatcaggaa
aaaaacagtgggacgcacattctaatgataacagaactggtgaatgatactaatgttcag
tttttggaccaagacgacgatgatgatcctgacacagaactgtacctcacacaacccttt
gcatgtgggacagcttttgccgtcagtgttctggactcactaatgagtgcgacatacttc
aatgacaatatccttactctgatccgaacgctggtgacaggtggggccacgccggagctt
gaggctctgattgctgaggagaacgctcttcgagggggttacagtaccccccagacactg
gccaacagggaccgctgccgcgtggcccagttagccctgctggatggcccctttgccgac
ttaggggatggtggttgttatggtgatctgttctgcaaagctctgaaaacatacaatatg
ctttgctttggaatttaccggctgagagatgctcacctcagcacccccagtcaatgtaca
aagaggtatgtcatcaccaaccccccttatgagtttgagctcgtgccgacggacctgatc
ttctgcttaatgcagtttgaccacaacgccggccagtcccgggcaagcctctcccattcc
tcccactcatcccagtcctccagcaagaagagttcttccgttcactccatcccgtccaca
gcaaacagacagaaccggcccaagtcccgggagtcccgagaaaaacagaatgcaacaagg
atgaatagaatgggccaagcagaaaagaaatggtttacagatgaaccggataatgcctat
cccagaaacattcaaatcaagcccatgagtacccacatggctaaccagatcaaccaatat
aaatccacaagcagcttgattccaccaatcagagaagtcgaagatgaatgttga
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