Sorex fumeus (smoky shrew): 130022799
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Entry
130022799 CDS
T10594
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
sfum Sorex fumeus (smoky shrew)
Brite
Enzymes [BR:
sfum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
130022799 (TARBP1)
Transfer RNA biogenesis [BR:
sfum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130022799 (TARBP1)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130022799 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130022799
NCBI-ProteinID:
XP_055969558
LinkDB
All DBs
Position
Unknown
AA seq
1612 aa
AA seq
DB search
MEGVLAETLLSQVPDPRVLVGALCRGEASVERVEALRFLLQRLEDEAARDGGGGGGAGAL
PEAALEAAAGYLVPLLRGPRSQPAGNRDAGPRARQRRRLLRAAGAALRSCARLAGSPQLA
ARVAEEALSDLRAGQPPGGVDGGGWEAAVEVLAAVVPCLRPLEDGPLLERAGQAALTLAL
DWDEAGPAGAEAEALVAGRLLPALGQCGGAALRAVWAGLLDPGAPAGSGRVGPQLLVLSA
LAEMLLPEPGAETGPDARSSGRFWKTVQTGLAHAQDALARKRARYLLRRAVEVSAERGAH
CACGPRERHGPTLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEYA
VSEENGCWLFHPSWHLCIYKRMFESENKILTKEGVTHFLGLYETKLLPFSQEFSEFIIGP
LMDALSESSLYSRFPGQPIGSGSPLGLKLQKFLVTYISLLPEEIKSSFLLKFIQKMTSRH
WCAIPILFISKALAGIPRCKALGLEGLLALRDVLQCTMITHQILLRGAAQCYLLQTAMNL
VDVEKVSLSDVSTFLMSLRQEESLARGTSLWRELCDWLHVNESSFRRSSSGSSIELHETS
YLNAYVKNLVQEYIKSPTWETGENCFVPDWFEARLIAMMVLLAVDVDGMKTIQHSEKQRT
QNVLRIFLDPLLDALMKFGTNAYMPLLKTDRCLQLLLKLLHTCLLKGSRTQDDEVFTVLQ
NFVMSTSESISQFILRRLTMNELTSISDLDRCHLYLMVLTELINLHLKIGWKSDNPIWRV
ISPLRNVSIQNLQETDDEQEPTLGRQIQRVISMASLAMLCETTDHKPDMQLDPLDAGPTD
RFLASLQFNQTLHKPHTEEQSSFFEESLPSQGWGKIVAQYIHDQWVCFSFLLKRYHTLIP
TSEGEILEPILPAVQMPVRTLQFALEALTVLPSDHVLPVFHCMKILVPKLLTSSESLCIE
SFDMAWKIISSLSNTQLIFWSNLKAFVHFVFDMKVLTIAAKIKGQVYFKIKEIMSNVIEM
SATKTGVFNVLISYCCQSWIVSASDVSQVSLSSAKNYSELILEACLFGTVFRHDQRLIQD
IHTFVENLGHECAANIIIENTKREDHYVRICAVKFLCLLDGSNMSQKLFIEDLAIKLLDK
DEFVSKFRTCYYVNSQQHRVKNRIWQTLLILFPRFDQNFLNRIIDKIFEAGFVSNQASVK
YFIEWIIILTLHKFPQFLPKFWDCFSYGEENLKTSICIFLSVLSHFDIITENIPEKKLIL
KQALIITLKWCFNHNFSVRLYALVALKKIWSMCKMLHIEEFDALTSVIESSLNQVENMHG
AGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYTLPRLSGLIEDEWITIGKFTKFTEIPL
DAEFQWYNSSTQLCELNAGDWSQQDIGSNSGEADNQSDWTDVQKKIIPWKNYVPELDLEL
VLQDRAARLGKLITRLIVVASLIDKPTNLGGLCRTCEVFGASVLVVGSLHYIKDKQFQHL
SVSAEHWLPLVEVKPPQLLDYLQQKKAEGYTIIGVEQTARSVDLTQYCFPEKSLLLLGNE
HEGIAANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLKHADNV
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtgctcgcagaaacgctgctgtcgcaggtcccggacccccgggtcctggtg
ggagcgctgtgccgcggggaggcttccgtggagcgcgtggaggcgctgcgcttccttctg
cagcggctggaggacgaggcggcgcgagacggcggcggcggcggcggcgcgggcgcgctc
ccggaggctgcgctcgaggcggccgccgggtacctggtcccgctgctgcggggcccgcgg
agtcaaccggcggggaaccgggacgccggcccgcgggcccgccagcgccgacggctgctg
cgggcggcgggcgcggcgctgcgctcgtgcgcccgcctggccgggagcccgcagctggcg
gcccgcgtggcggaggaggcgctgagcgacctgcgggccgggcagccgccgggcggcgtg
gacggcggcgggtgggaggcggccgtggaggtgctggcggccgtcgtgccgtgcctgcgg
cccctggaggacgggccgctgctcgagcgcgcggggcaggccgccctcactctggcgctg
gactgggacgaggccgggcccgccggggccgaggcggaggcgctagtggccgggcggctg
ctgcccgcgctgggccagtgcggcggcgctgcgctgcgggccgtgtgggccggcctgctg
gaccccggggcgcccgcggggtcgggccgcgtcgggccgcagctgctggtcctgagcgcc
ctggccgagatgctgctgccggagcccggcgccgagacgggcccggacgcccgcagcagt
gggcggttctggaagacggtgcagaccgggctggcccacgcccaggacgcgctggcgcgc
aagcgagcgcgctacctgctgcggcgcgcggtggaggtgtcggccgagcggggcgcccac
tgcgcctgcggtccccgggaaagacacggtcccactctgttttggtggtctgagaagaaa
aaagatgaactgctgaagttttgggaaaactatattttaatcatggaaaccttagaagga
aatcagatacatgttataaagccggttttaccaaagctaaacaatctgtttgaatatgca
gtgtcagaggaaaatggatgttggctctttcatccatcctggcatttgtgtatttataaa
agaatgtttgaaagtgaaaacaaaatcctgaccaaggaaggtgttacccactttctaggg
ctgtatgaaacaaagctgcttccattttcacaagaattttctgagtttattattggacca
ttaatggatgcactttctgaaagctcactatatagcaggtttccgggccaacccatagga
agtggttctccactaggattgaaattacagaagtttttagtcacttatatttctcttctt
ccagaagaaataaaaagcagtttccttttaaagtttattcagaagatgacaagtagacat
tggtgtgcaatccctattttgtttatatctaaggctttggcaggtatcccaagatgtaaa
gctctgggtcttgaagggcttcttgcactcagggatgttcttcagtgtactatgatcaca
catcagattctgctgagaggggcagctcaatgctatcttcttcagacagctatgaatttg
gttgatgtggagaaagtgtcactttccgatgtctcaacttttctcatgtctctgagacaa
gaggagtccttagcacgaggaacatcactgtggagagagctctgtgattggttacatgtt
aatgaaagcagttttaggagatcttcatctggtagctccattgaactacatgagacatcc
tatttaaatgcttatgtaaagaacctagttcaagaatatattaaatcacctacttgggaa
acaggagaaaactgctttgtacctgattggtttgaagctaggctcattgctatgatggtc
ttattggcagttgatgtggatggaatgaagacaattcagcatagtgaaaagcagcgaaca
caaaatgttttgaggatattcttagatcctctactggatgcccttatgaagtttggtaca
aatgcctacatgcccttgctgaaaaccgacagatgcctccagttgctattgaagttattg
catacttgcttgttgaaaggttccagaacccaagatgatgaagtatttactgttcttcag
aactttgtcatgtctacttcagagagtatttctcagtttatactcagaagacttactatg
aatgaactaactagtatttcagatctggatcgctgtcatttatacctgatggtattaact
gagcttataaatctccatttgaagattgggtggaaaagcgataaccctatttggagagtt
atttctcctttgagaaatgtatctattcaaaatcttcaagagacggacgatgaacaggaa
ccgacacttggtagacagattcagagagtcattagtatggcctccttggccatgttgtgt
gagaccactgaccacaagcctgacatgcagctggaccccttggatgcaggacccactgac
aggttccttgcttctctacagttcaatcagacattgcataaaccccacacagaggagcaa
agcagtttctttgaagaatctttaccttcccaaggatggggaaaaatagttgcacagtat
attcatgatcagtgggtctgcttctcttttctgttgaaaagatatcacactcttattcca
acatcagaaggtgaaattctggaacccattttacctgctgttcaaatgccagtaaggact
ttacagtttgcactagaagccctcacagttcttccttctgatcacgttttacctgtgttc
cattgcatgaaaattttggttcctaagcttctgacatcctctgaatcactctgcatcgag
tcttttgacatggcttggaaaattatatcttctttaagcaatactcagttgatattctgg
tctaatttaaaagcttttgttcattttgtttttgatatgaaagttcttaccattgctgca
aaaatcaagggccaggtgtatttcaaaataaaagagattatgtccaatgtaatcgaaatg
tctgctacaaaaactggcgtcttcaatgtactaataagttattgctgccagtcttggata
gtttctgcttcagatgtgtcccaagtatcattatcaagtgctaaaaattatagtgaactt
atccttgaggcttgtttgtttggaactgtgtttaggcatgatcaaagacttattcaggat
atacataccttcgtagaaaatcttgggcatgaatgtgcagctaacattattattgaaaat
actaaaagagaagaccattatgtgagaatttgtgcagtcaaattcctctgtttattggat
ggatcaaatatgtctcagaagttgtttatagaagaccttgcaatcaagctcttagacaaa
gatgaatttgtgtctaagtttagaacatgttactatgtaaattctcaacaacatcgagtg
aaaaatcgaatatggcagactctgctcatccttttcccgagatttgatcagaatttcttg
aatagaattattgacaagattttcgaggctggttttgtcagtaatcaagcatccgtaaaa
tattttatagaatggattattatattgactcttcataaatttcctcagttccttccaaag
ttctgggattgcttttcatatggtgaagaaaaccttaaaacaagcatttgcatattttta
tcagttctgtcacattttgacatcattactgaaaatattccagaaaagaaactaattctg
aagcaagcccttattatcacactgaagtggtgcttcaaccataattttagtgtacgtttg
tatgcactagttgcgcttaagaaaatctggagtatgtgcaaaatgttgcatattgaagaa
ttcgatgctttgacttctgttattgaatcaagccttaatcaggtggaaaatatgcatgga
gctgggaatgccaagaagaattggcagcgcattcaagaacatttcttttttgcaacattt
cacccacttaaggattattgtctggagactatattttacacccttccacgcctttcaggc
cttattgaagatgaatggatcaccattggtaaatttaccaaattcactgaaattccttta
gatgcagaatttcagtggtacaattcttcaactcaactttgtgaattaaatgcaggtgac
tggtctcagcaggacataggttctaactcaggagaagcagataaccaatcagactggact
gatgttcagaagaagattatcccatggaaaaattatgttccagagttagatctggagtta
gttcttcaggatcgtgctgccagacttggaaagttgattaccagactgattgttgtagcc
tcactcattgataagccaaccaatttgggaggactgtgccggacctgtgaggtttttggg
gcctcagtgctcgttgttggtagtctgcactatatcaaggataaacagtttcagcacctc
agcgtttcagcagaacactggcttcctttagtggaggtaaaaccacctcaattgcttgat
tatctgcagcagaaaaaagcagaaggttatactatcattggtgtggaacaaactgccaga
agtgtagatctgactcaatactgctttcctgagaaatctctacttttgttgggaaatgaa
catgaaggaattgcagcaaatctgatccaacaattggatgtctgtgtggaaattcctcaa
cagggaattattcgctcacttaatgtccatgtgagtggagctctcctgatttgggaatat
accagacaacagctgcttaagcatgcagacaatgtatga
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integrated database retrieval system
