Sorex fumeus (smoky shrew): 130022959
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Entry
130022959 CDS
T10594
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03010
Ribosome
sfum04120
Ubiquitin mediated proteolysis
sfum04137
Mitophagy - animal
sfum04140
Autophagy - animal
sfum05012
Parkinson disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05167
Kaposi sarcoma-associated herpesvirus infection
sfum05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
130022959
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130022959
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130022959
04137 Mitophagy - animal
130022959
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
130022959
05167 Kaposi sarcoma-associated herpesvirus infection
130022959
09164 Neurodegenerative disease
05012 Parkinson disease
130022959
05022 Pathways of neurodegeneration - multiple diseases
130022959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sfum03011
]
130022959
04121 Ubiquitin system [BR:
sfum04121
]
130022959
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130022959
Ribosome [BR:
sfum03011
]
Ribosomal proteins
Eukaryotes
Small subunit
130022959
Archaea
130022959
Ubiquitin system [BR:
sfum04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
130022959
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130022959
Exosomal proteins of colorectal cancer cells
130022959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
DUF2604
TBK1_ULD
HemeBinding_Shp
Motif
Other DBs
NCBI-GeneID:
130022959
NCBI-ProteinID:
XP_055969629
LinkDB
All DBs
Position
Unknown
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVELSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMASHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaacccttacggggaagactatcactctcgaggtcgaactctcg
gatacgatagaaaatgtcaaggccaagatccaggataaggaaggaattcctcccgatcaa
caaagattgatctttgctggtaaacaacttgaagatggacgtactttgtctgactacaac
atccaaaaggagtccactcttcatctcgttttgagacttcggggtggtgcaaagaaaagg
aagaagaagtcttacaccactcccaagaagaacaagcataagagaaagaaggttaagctg
gctgtcctgaaatactacaaggtggatgagaatggcaaaatcagccgccttcgccgggaa
tgcccttcagatgaatgtggtgctggagtttttatggccagccactttgacagacattat
tgtggcaaatgttgtctgacatactgtttcaataaaccagaagacaaataa
DBGET
integrated database retrieval system
