KEGG   Sorex fumeus (smoky shrew): 130023380
Entry
130023380         CDS       T10594                                 
Name
(RefSeq) putative claudin-24
  KO
K06087  claudin
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03272  Virion - Hepatitis viruses
sfum04382  Cornified envelope formation
sfum04514  Cell adhesion molecule (CAM) interaction
sfum04530  Tight junction
sfum04670  Leukocyte transendothelial migration
sfum05160  Hepatitis C
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    130023380
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    130023380
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    130023380
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    130023380
  09158 Development and regeneration
   04382 Cornified envelope formation
    130023380
 09160 Human Diseases
  09172 Infectious disease: viral
   05160 Hepatitis C
    130023380
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:sfum03037]
    130023380
   04147 Exosome [BR:sfum04147]
    130023380
Cilium and associated proteins [BR:sfum03037]
 Other cilia and associated proteins
  Stereociliary proteins
   130023380
Exosome [BR:sfum04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   130023380
  Exosomal proteins of colorectal cancer cells
   130023380
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2
Other DBs
NCBI-GeneID: 130023380
NCBI-ProteinID: XP_055969864
LinkDB
Position
Unknown
AA seq 262 aa
MGLSCRAAGQYLGLLLSALGWVLTIITTYLPLWKHRNLDLNEMENWTLGLWQACVVQEEV
GRQCKVFESFLALPAELRISRILMFVSHGLGVLGLLLSTLGLDCMRVGERPPGLKKRLLV
LGGLLLWTAGVVALVPVSWVAYGTVREFWDEAIPEIVPRWELGDALFLGWFGGLCLLLGG
GLLNCAACLGPGAPTVGLEEAGAASQLGGHPREMEPHPAKCQTWTGPQSQACRGLFKEGQ
WYPRSVSIKTRSCPSPRPEPEK
NT seq 789 nt   +upstreamnt  +downstreamnt
atgggcttgagttgcagagccgccgggcagtacctgggcctcctgctctctgcgctgggc
tgggtcttaaccatcatcaccacctacttgccgctctggaagcatcgcaacctggaccta
aacgagatggagaattggaccctggggctctggcaggcgtgcgtggtccaggaggaagtg
ggcagacagtgcaaggtcttcgagtctttcctggctctgccggccgagctgaggatctcc
aggatcttgatgtttgtgtcccatgggctgggcgtgctgggcctgctgctgtccacgctg
ggcctagactgcatgcgggtcggcgagaggccgccggggctcaagaagcggttgctggta
ctgggtggcctcctgctgtggacagcgggcgtggtggcgctggtgcccgtgtcctgggtg
gcgtacgggactgtgagggagttctgggatgaggccatccctgagatcgtgcccaggtgg
gagttgggtgacgctctcttcctgggctggttcggggggctgtgtcttctcctgggaggg
ggtctgctcaactgtgctgcctgcttgggtccgggggcccccactgtgggcctcgaggag
gccggggccgcctcccagctcggcgggcatccccgagaaatggagccgcaccccgcaaag
tgtcagacctggactggccctcagtcgcaggcatgcaggggtctttttaaggagggacag
tggtacccacgcagcgtctccatcaagacccgctcctgtccttcccctcgcccagagccg
gagaagtga

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