Sorex fumeus (smoky shrew): 130023439
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Entry
130023439 CDS
T10594
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130023439 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130023439 (DHX36)
03012 Translation factors [BR:
sfum03012
]
130023439 (DHX36)
Enzymes [BR:
sfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130023439 (DHX36)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130023439 (DHX36)
Translation factors [BR:
sfum03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130023439 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
PhoH
AAA_23
Motif
Other DBs
NCBI-GeneID:
130023439
NCBI-ProteinID:
XP_055969921
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MSHEQQGWGRDGGGRGSGRGGGRGGRGRHPGHLKGREIGLWYAKKQGQKSRDAERQERAV
VHMDERREEQIVQLLHSVQAKSERDNTEPQLSWFEPEDHGYGTEVPAQSKPHSEKKPENH
EKRLVKPEKVPFRVRDRYGDRDAEYIFQDNEPDGALDQQLLEELQKKKTDLRYIEMQRFR
EKLPSFGMRKELVEMINGHQVTVISGETGCGKTTQVTQFILDDYIERGKGSACRIVCTQP
RRISAISVAERVAAERAESCGGGCSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPR
LASVSHVVLDEIHERNLQSDVLMTVIKDLLGVRPDMKVVLMSATLNAEKFSEYFGHCPMI
HIPGFTFPVVEYLLEDVIEMIRYVPEQREHRSQFKRGFMQGRSHRQDKEEKEALYRERWP
GYLQQLRKKYSPSTIEALEMADDDKVDLNLIAALIRHIALKEEDGAVLVFLPGWDNISTL
HDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVV
FVIDGGKIKETHFDTQNNISTMSAEWVSNANAKQRKGRAGRVQPGHCYHLYNGLRASLLD
DYQLPEILRTPLEELCLQIKILRLGGIADFLGRLMDPPSDEAVSLSIRHLIELTALDKQE
ELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADAR
RKELAKDTRSDHLTVVNAFEGWEEARRRGFRCEKDYCWEYFLSSNTLQMLHNMKTQFTEH
LLGAGFVSSRNPKDPKSNINSDNEKIIKAVICAGLYPKVAKIRLNSGKKRKMVKVYTKPD
GLVAIHPKSVNVEQTDFRYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKE
QETIAVDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHPVDWKDTGSRECAVLSAIT
DLIKSQEKAAPRNGPSCFQDGGYCS
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgagccacgagcagcagggctggggccgcgacggcgggggccgcgggtcgggccggggc
ggggggcgcggcgggcgcggccggcaccccgggcacctcaagggccgcgagatcggcctg
tggtacgccaagaagcagggccagaagagccgcgacgccgagcgccaggagagggccgtg
gtgcacatggatgagcgccgagaggagcagatcgtgcagctgctgcattcggtgcaggcc
aagagcgaaagggacaacacggagccccagctctcctggtttgagcctgaggatcacggg
tacggcaccgaggtccctgcccaaagcaagccccactcggagaagaagcccgagaaccac
gagaagagactggtgaagcctgaaaaggtgcccttcagggtcagggacagatacggggac
cgggatgctgagtatatcttccaagacaacgagccggatggagccttggaccagcagtta
ctggaggaactgcagaagaagaagacggatcttcgttacatcgagatgcagcgcttcaga
gaaaagctgccttcattcgggatgcggaaggagctggtggaaatgatcaatggccaccag
gtcaccgtgataagtggcgagactggttgtggcaagaccactcaggtcacccagttcatc
ttggacgactacatcgagcgagggaaggggtctgcgtgccgcatcgtgtgcactcagccc
cggaggatcagcgccatctcagttgctgagcgggtggctgcagaacgcgcggagtcctgt
ggaggaggctgcagcacgggctaccagatccgcctgcagagtcggctgccccggaagcaa
gggtccatcctgtactgcacgacggggatcatcctgcagtggctccagtcagacccgcgg
ctggccagcgtcagccatgtggtgctggatgagatccacgagcggaacctgcagtccgat
gttctgatgacggtcatcaaggacctgctcggagtccggcctgacatgaaggtcgtcctc
atgagcgcaacgctgaacgccgagaagttctcagagtattttggccactgtccaatgatc
cacatccctgggttcaccttcccggtggtggagtatcttctggaggacgtcattgagatg
ataagatacgtccccgagcagagggagcacagatcccagtttaagaggggcttcatgcaa
gggcgctcccaccggcaggacaaggaggagaaggaggccctgtaccgggagcgctggcct
ggctacctgcagcagctgcggaagaagtattctcccagcactatcgaagcgctcgagatg
gcagacgacgataaagtggacctgaacctgattgccgccctcatccggcacatcgctctg
aaggaggaggatggtgccgtgcttgtcttcctgcctggctgggacaatattagcacttta
cacgacctcttgatgtcccaagtgatgtttaagtcagacaggtttctgattatccctttg
cattcactgatgcccaccgtgaaccagacccaggtatttaaaagaacccctcctggtgtt
cggaagattgtcattgcgaccaacatcgccgagaccagcatcaccatagatgatgtcgtc
tttgtgattgatggcgggaagataaaggagacgcactttgacacccagaacaacatcagc
accatgtctgcggagtgggtcagtaacgccaatgccaagcagaggaagggccgagctggc
agggtccagcctggccactgctatcacctgtacaacggtctccgagccagcctgctggac
gactaccagctgcccgagatactgaggacccctctggaggagctctgcctgcagatcaag
atcttgagactcgggggcattgctgacttcctgggcaggctgatggaccccccatcagat
gaagcagtgtcactttccatacgacacctgatcgaactgaccgctctggacaagcaggag
gagctgacgcctctcggggtgcacctggcgcggctgccggtggagccgcacatcgggaag
atgattcttttcggggctctgttctgctgcctggaccccgtcctcaccatcgcggccagc
ctcagcttcaaagaccccttcgtcattccactggggaaagagaaggtcgcagacgcaagg
aggaaggagttggcaaaggacaccaggagtgaccacctgacggtcgtgaacgcattcgag
ggctgggaggaagccagacgccggggcttccgctgcgagaaagactattgctgggagtat
ttcctgtcttccaacactctgcagatgctgcacaacatgaagacgcagttcaccgagcat
ctcctcggggctgggttcgtgagcagcaggaacccgaaagatccgaaatcaaacatcaac
tcagataacgagaagatcatcaaagctgtcatctgtgctgggttgtatcccaaagttgcg
aagattcgcctaaactctggtaaaaaacggaaaatggtgaaggtgtacacgaagccggat
gggctggttgccatccaccccaaatctgtgaacgtggagcagacggacttccgctacaac
tggctcatctaccatctgaagatgcggacgagcagcatctacctgtacgactgcacggag
gtctccccgtactgcctgttgttcttcgggggcgacatctccatccagaaggacaaggag
caggagacgattgctgtggacgagtggatcgtcttccagtccccggcaagaatcgcccat
ctcgtcaaggagctgaggaaggagctggacacgctgctgcaggagaagatcgagagcccc
caccccgtcgactggaaggacacagggtccagggagtgtgcggtgctctccgccatcacc
gacctcatcaagtcccaggagaaggcggcccccaggaacggtccctcctgcttccaagac
gggggctactgcagctga
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