Sorex fumeus (smoky shrew): 130023583
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Entry
130023583 CDS
T10594
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04517
IgSF CAM signaling
sfum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130023583 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130023583 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130023583 (SPTBN1)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130023583 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
130023583 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
PH_11
Motif
Other DBs
NCBI-GeneID:
130023583
NCBI-ProteinID:
XP_055970118
LinkDB
All DBs
Position
Unknown
AA seq
2378 aa
AA seq
DB search
MHRPSEGADAEERLRQLTMTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFER
SRIKALADEREAVQKKTFTKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPK
PTKGRMRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDI
SVETEDNKEKKSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDF
DKLKKSNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKA
LAVEGKRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQ
AFNTYRTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKA
EHERELALRNELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATK
KHEAIETDIAAYEERVQAVVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQ
RLEMNLGLQKIFQEMLYIMDWMDEMKVLLLSQDFGKHLLGVEDLLQKHALVEADIGIQAE
RVRAVNASAQKFAADGEGYKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWK
FFWEMAEEEGWIREKEKILSSDDYGRDLTSVVRLLSQHRAFEDEMSGRSGHLEQAIREGE
AMITEQHFGFEKTRERIADIREQWASLGRLAAVRKRRLEEALLLHQFQADADDVDAWMLD
ILKIVSSSDVGHDEYSTQSLVKKHKDVAEEIANYRPAIDALHEQAGALPPEHAESPAVRA
RLAGVEERYKEVAELTRLRKQALQDTLALYKMFNEADACELWIDEKEQWLDSMQIPEKLE
DLEVIQHRFESLEPEMNSQASRVAVVNQIARQLMHSGHPSEKDIKAQQDKLNTRWSQFRE
LVDRKKDALLSALSIQNYHLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGME
RDLVAIEAKLSDLQKEAEKLESEHPDQVQAILSRLAEIGDVWEEMKTTLRNREASLGEAS
KLQQFLRDLDDFQSWLSRTQTAIASEDMPNTLAEAEKLLTQHENIKNEIDNYEEDYQKMR
DMGEMVTQGQTDAQYMFLRQRLQALDTGWNELHRMWENRQSLLSQSHAYQQFLRDTKQAE
AFLNNQEYVLAHTEMPATLEGAEAAIRKQEDFMTTMDANEEKISAVVESGRRLLSAGNVS
SDRIQEKVDSIDDRHRKNREAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMS
YDEARNLHSKWLKHQAFMAELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMW
EVLESTTQTKAQRLFDANKAELFTQSCADLDKWLHGLETQIQSDDYGKDLTSVNILLKKQ
QMLENQMEVRKKEIEELQSQAQALSQEGKSTDEVDSKRLTVQTKFRELLEPLTERKQYLL
ASKEIHQFNRDVEDEILWVGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRID
DIFERSQSIVTASSPNAEAIRQRLADLKQLWGQLMAETEKRHARLEEAHRAQQYYFDAAE
AEAWMSEQELYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSTTSRALVAEGH
PESERISMRQSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGS
HELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHMADDLINSGHSDAATIAEWKDGL
NEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQ
RMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGR
RVRLLDTGDKFRFFSMVRDLMLWMDDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDAR
NDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFS
RDASVAEAWLLGQEPYLSSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLE
LLEVRRQQEEEERKRRPPSPEQTKVSEETESQQWDASKGEPVSHNGLPTDQGSPRMTDKG
NTSELVNGAAEQRTSSKESSPIPSPTSDRKAKTGLPAQGAATLPARTQDAPSAQMEGFLN
RKHEWEAHNKKASSRSWHNVYCVINNQEMGFYKDAKMAASGVPYHSEVPVSLREAVCEVA
LDYKKKKHVFKLRLSDGNEYLFQAKDDEEMNAWIQAISFAIADKHEVAASTQSTPASSRA
QTLPTSVVTITSESSPGKREKDKEKDKEKRFSLFGKKK
NT seq
7137 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggccgtcagaaggggctgatgcggaggagaggctgagacagctcacgatgacc
accaccgtagccacagactacgacaacatcgagatccagcagcagtacagtgacgtcaac
aaccgttgggatgtggacgactgggacaatgagaacagctcagcgcggctctttgaacgc
tcgcgcatcaaggcgctggcagatgagcgcgaggccgtgcagaagaagacgttcaccaaa
tgggtcaactcccacctggcccgggtgtcctgccggatcacagacctatacacggacctc
cgggatgggcggatgctcatcaagctgctggaggtgctctccggggagaggctgcccaag
cccaccaagggccgcatgcgcatccactgcctggagaacgtggataaggccctgcagttt
ctgaaggagcagagagtccacctcgagaacatggggtcccacgacatcgtggacgggaac
caccggctcacgctgggcctcatctggaccatcatcctgcgcttccagatccaagatatc
agtgtcgaaaccgaagacaacaaggagaagaaatccgccaaggatgcgctcctcctgtgg
tgccagatgaagacagctgggtaccccaacgtcaacatccacaacttcaccacgagctgg
cgggatggcatggccttcaatgccctgatccacaagcaccggccagacctgatagatttc
gacaagctgaagaaatccaacgcacactacaatctccagaatgcattcaacctggccgag
cagcacctggggctcaccaaactgctggaccctgaggacatcagcgtggaccaccccgac
gagaagtccatcatcacctatgtggtgacctactaccactacttctccaagatgaaggcc
ctggccgtggaggggaagcgaatcgggaaggtgctcgacaatgctattgaaacagagaaa
atgattgagaagtacgagtcacttgcctctgaccttctggaatggatcgaacaaactatc
atcattttaaacaatcgcaaatttgccaactctttggtgggagtccagcagcaactccag
gccttcaacacgtaccgcactgtggagaagccccccaagttcaccgagaagggaaacctg
gaggtgttgctcttcaccatccagagcaagatgcgggccaacaaccagaaggtctacatg
ccccgggaggggaagctcatctctgacatcaacaaggcctgggagcgactggaaaaagcc
gaacacgaacgcgaactggccctgcggaatgagctcatccggcaggagaaactggaacag
ctcgcacgcagattcgaccgcaaagcggccatgcgggagacgtggctgagtgagaaccag
cggctggtgtctcaggacaactttggattcgaccttcccgccgtggaggcggccacgaag
aagcacgaggccatcgagacggacatcgccgcctacgaggagcgcgtgcaggccgtggtg
gccgtggcccgggagctggaggccgagaactaccacgacatcaagcgcatcacggcgagg
aaggacaacgtcatccggctctgggagtacctgctggagctgctgcgggcacgccggcag
cgcctggagatgaacctggggctgcagaagatcttccaggagatgctgtacatcatggac
tggatggacgagatgaaggtgctgctgctgtcgcaggacttcggcaaacacttgctgggc
gtggaggacctgctgcagaagcacgccctggtcgaggccgacatcggcatccaggcggag
cgcgtgcgggctgtcaacgcctccgcccagaagttcgccgcggacggggaaggctacaag
ccctgcgacccgcaggtgatccgggaccgcgtggcccacatggagttctgctaccaggag
ctctgccagctggcggctgagcgtcgggcgcgcctggaggagtcccgccgcctctggaag
tttttctgggagatggcggaggaggagggctggatccgcgagaaggagaagatcctgtcg
tccgacgactatggccgcgacctgaccagcgtggtgcggctgctcagccagcaccgcgcc
ttcgaggatgagatgagcggccgcagcggccacctggagcaggccatccgggagggtgag
gccatgatcaccgagcagcacttcggcttcgagaagacgcgggagcgcatcgcggacatc
cgcgagcagtgggccagcctgggccgcctggcggccgtgcgcaagcggcgtctggaggag
gcgctgctgctgcaccagttccaggccgacgccgacgacgtggatgcctggatgctggac
atcctcaagatcgtgtccagcagcgacgtgggccacgacgagtactccacgcagtcgctg
gtgaagaagcacaaggacgtggcggaggagatcgccaactaccggccagccattgacgcg
ctgcacgagcaggcgggcgcgctgccgcccgagcacgccgagagccccgcggtcagggcc
cggctggctggcgtcgaggagcgctacaaggaggtggccgagctgacgcggctgcgcaaa
caggccttgcaggacacgctggccctctacaagatgttcaacgaggccgacgcctgcgag
ctctggatcgacgagaaggagcagtggctggacagcatgcagatccccgagaagctggag
gacctggaggtcatccagcacaggttcgagagtctggagcccgagatgaacagccaggcc
tcccgggtggccgtggtcaaccagatcgcccggcagctgatgcacagcggccacccgagt
gagaaggacatcaaagcccagcaggacaaactgaacacgaggtggagccagttcagggaa
ctggtcgaccgcaagaaggacgcacttctctctgctctgagcatccaaaactaccacctc
gagtgcaacgagaccaagtcctggatccgggagaagaccaaggtgattgagtccactcag
gacctgggcaacgacctggcgggcgtgatggccctgcagcgcaagttgaccggcatggag
cgggacctggtggccatcgaggcgaaactgagcgacctgcagaaggaggcagagaagctg
gagtcggagcacccggaccaggtgcaggccatcctgtcgaggctggccgagatcggcgac
gtgtgggaggagatgaagaccacgctgcggaaccgcgaggcctcgctgggggaggccagc
aagctgcagcagttcctgcgggacctggacgacttccagtcctggctgtcccgcacgcag
acggccatcgcctcggaggacatgcccaacacactggccgaggccgagaagctgctcacg
cagcacgagaacatcaagaacgagatcgacaactacgaggaggactaccagaagatgcgg
gacatgggtgagatggtcacccagggccagacggacgcccaatacatgttcctgcgccag
cggctgcaggccctggacacgggctggaacgagctgcacaggatgtgggagaacaggcag
agcctcctgtcccagtcacacgcctaccagcagttcctgcgtgacacgaagcaggctgag
gccttcctcaacaaccaggagtacgtcctggcccacactgagatgcccgccacgctggag
ggcgccgaggctgccatccgcaagcaggaggatttcatgaccaccatggacgccaacgag
gagaagatcagcgccgtggtggagtcgggccgcaggctgctgagcgccggcaacgtcagc
tcagaccgtatccaggagaaggtggactccatcgacgacagacacaggaagaaccgcgag
gcagccagtgagcttctgatgcgactgaaggacaacagggaccttcagaagttcctgcag
gactgtcaggagctctctctctggatcaacgagaagatgctcacggcccaggacatgtcc
tacgacgaggcccgaaacctgcacagtaagtggctgaagcaccaggcgttcatggcggag
cttgcgtccaacaaagaatggctggacaagatcgagaaggaaggaatgcagctcatttct
gaaaagccagagacggaagctgtggtgaaggagaaactcactggtttacacaagatgtgg
gaagtccttgaatccaccacccagaccaaggcccagcgactttttgatgcaaacaaggct
gaacttttcacccagagctgtgcggacctggacaagtggctgcatgggctggagacccag
atccagtctgatgactacggcaaggacctcaccagcgtcaacattctgctcaaaaagcag
cagatgctggagaaccagatggaggtgaggaagaaggagatcgaagagctgcagagccag
gcccaggccctgagccaggaggggaagagcacggacgaggtggacagcaagcggctgact
gtgcagaccaagttccgggagctgctggagccgctgaccgagaggaagcagtacctgctg
gcctccaaggagatccatcagttcaaccgggatgtggaggatgaaatcctgtgggtcgga
gagcgcatgcctctggccacatccacggaccacggccacaacctgcagaccgtgcaactt
ctcatcaagaagaaccagaccctccagaaggagatacagggccaccagccgcgcatcgac
gacatcttcgagcggagccagagcatcgtcacggccagcagccccaacgccgaggccatc
cggcagcggctggctgacctgaagcagctgtgggggcagctgatggctgagacggagaag
cgacatgcgcggctggaggaggcccaccgcgcccagcagtactacttcgatgcggctgag
gccgaggcctggatgagcgagcaggagctgtacatgatgtcagaggagaaagccaaggac
gagcagagcgccgtgtccatgctgaagaagcaccagattctggagcaggccgtggaagac
tatgcggagactgtgcaccagctgtccaccacaagccgcgccctggtggccgagggccac
cccgaaagcgagcgcatcagcatgcggcagtccaaggtggacaagctgtacgcgggactg
aaggacctggccgaggagaggaggggcaagctggacgagcggcaccggctgttccagctc
aaccgggaggtggacgacttggagcagtggatcgccgagagggaggtggtcgcaggctcc
cacgagctggggcaggactatgagcatgtcacgatgctccaggaacggttccgagagttc
gcccgggacacggggaacatcgggcaggagcgagtagacacggtgaaccacatggcagac
gacctcatcaactcgggccactcggacgcggctaccatcgccgaatggaaggacgggctc
aacgaggcctgggccgacctcttggagctcatcgacaccaggacgcagatccttgccgcc
tcctacgagctgcacaagttctaccacgatgccaaggagatctttgggcgcatccaggac
aagcacaagaaactccccgaggagctagggcgggaccagaacacagtggagaccctgcag
cggatgcacaccaccttcgagcacgacatccaggcactgggcacgcaggtgcggcagctg
caggaggatgcggcccgccttcaggcggcctatgcaggcgacaaggccgatgacatccag
aagcgggagaatgaggtactggaggcctggaaggccctcctggacgcctgtgagggccgc
agggtgcgactgctggacacgggggacaagttccgcttcttcagcatggtgcgggatctc
atgctgtggatggacgacgtcattcggcagatcgaggcccaggagaagcccagggatgtg
tcatcggttgagctattgatgaataatcatcagggtatcaaagctgagatcgatgctcgg
aatgacagtttcacaacctgcattgaacttgggaaatccctgctggcgagaaagcactat
gcatcagaggagatcaaggaaaagttgttgcagctgacggaaaagagaaaagaaatgatt
gacaagtgggaggaccgatgggaatggcttcgactgatcctggaggtccatcagttctca
agggacgccagcgtggctgaggcctggctgctggggcaggagccatacctgtccagccgg
gaaattggccagagtgtggacgaggtggagaagctcatcaagcggcacgaagcctttgag
aagtcggccgccacctgggatgagcgcttctctgccctggaaaggctgacaacattggag
ttactggaagtgcgtagacagcaagaggaagaagagaggaaacgacggccgccatctccg
gagcagacgaaggtttctgaggagaccgagtcccagcagtgggacgcttccaaaggagaa
cctgtgtcccataatggcttgccgactgaccagggatctccacggatgacagacaagggg
aacacgagcgaattggtcaatggcgccgcagagcaaaggacgagctcgaaggagtccagc
cccatcccctccccaacatccgaccgcaaagccaagactggcctcccagcccagggcgcg
gccaccctcccagcccggacgcaggacgctccctccgcccaaatggaaggcttcctgaac
cggaagcacgagtgggaggcccacaacaagaaggcctcgagcagatcctggcacaacgtc
tactgcgtcatcaacaaccaggaaatgggcttctacaaggacgcgaagatggcggcctct
ggggtgccctaccacagcgaggtccccgtgagtcttagggaggccgtctgtgaggtggcg
ctcgactacaagaagaagaagcatgtgttcaagctcaggctgagcgatggcaacgagtac
ctcttccaagccaaagacgacgaggaaatgaatgcatggatccaggccatctccttcgcc
atcgccgacaaacatgaggtggccgccagcacccagagcacgccggcatccagccgggca
cagaccctgcccaccagcgtcgtcaccatcaccagcgagtccagtcccggcaagcgggag
aaggacaaagagaaagacaaagagaagcggtttagcctgtttggcaaaaagaagtga
DBGET
integrated database retrieval system
