Sorex fumeus (smoky shrew): 130023594
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Entry
130023594 CDS
T10594
Symbol
PDLIM3
Name
(RefSeq) PDZ and LIM domain protein 3 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130023594 (PDLIM3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
130023594 (PDLIM3)
Domain-containing proteins not elsewhere classified [BR:
sfum04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130023594 (PDLIM3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
130023594
NCBI-ProteinID:
XP_055970128
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MPQNVVLAGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFATESM
THADAQDRIKAAAHQLCLKIDRAETRLWSPQVSEDGKGHPFKINLESEPQEFKPIGAAHN
RRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPSSPQNVCSTPSG
FDCGSGRSTPSSVSTVSTICPGDLKVAAKLAPNIPLEMELPGVKILHAQFNTPMQLYSDD
NIMETLQGQVSTALGESSSMSEPAASVPPQSDVYRMLHDNRDEPTQPRQSGSFRVLQELV
NDDDRPAGTRSVRAPVTKVHSGAGSAPKMPLCDKCGSGIVGAVVKARDKYRHPECFVCAD
CNLNLKQKGYFFVEGELYCETHARARTRPPEGYDTVTLYPKA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatgtggtcctcgcgggccccgcgccctggggcttcaggctctcggggggc
atcgacttcaaccagcctctggtcatcaccaggattactccaggaagcaaggcggcagct
gccaacctgtgtccgggggatgtcatcctggcgattgatggctttgctaccgagtccatg
actcatgctgatgcacaggacaggattaaagcagcagcacaccagttgtgtctcaaaatt
gacagggcagaaactcgcttgtggtccccacaggtatctgaagacggaaaaggccatcct
ttcaaaatcaacctggaatcagaaccacaggagttcaaacccattggtgccgcgcataac
agaagggcccagccttttgttgcagcagcaaacattgatgacaaaagacaggtagtgagt
gcttcctataactcacccattgggctctattcaactagcaatatacaagatgcacttcac
ggacagctgcggggtctcattcctagttcacctcaaaatgtctgcagtactccgtctggt
tttgactgtggcagtggacggagcaccccttcttctgtcagtactgttagtactatttgc
ccaggtgacttgaaagttgctgctaagctggcccctaacattcctttggaaatggaactt
cctggtgtgaagattttacatgctcagtttaatacaccaatgcagttgtactcagatgac
aatattatggaaacacttcagggtcaggtttcaacagctctaggggaatcatcctcaatg
agtgagcctgcagcttctgtgcccccacagtcggatgtgtaccggatgctacacgataat
cgcgatgagcctactcagcctcgccagtcaggctccttcagagtgctccaagaactagtg
aacgatgatgaccgtcccgctggaacgaggagtgtgagggcgccagtgacaaaagtgcac
agtggggctggcagcgccccaaagatgccgctctgtgacaagtgcggaagtggcattgtg
ggggccgtggtgaaggcccgggacaagtaccgccacccagagtgcttcgtgtgcgccgac
tgtaacctcaacctcaaacagaagggctacttcttcgtggagggagagttgtactgcgaa
acccacgcacgcgcccgcacgaggcccccagaaggctacgacacagttaccctctatccc
aaagcctaa
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