Sorex fumeus (smoky shrew): 130023733
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Entry
130023733 CDS
T10594
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130023733 (SMC4)
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
130023733 (SMC4)
Condensin II
130023733 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
130023733
NCBI-ProteinID:
XP_055970299
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MPRRGPPASGGRRGARDPAPPSPDETGRAAEPPPPTPPSGAAEPEPAPPEPEHDGRSLQD
ILGGIEPPPPPAMASEAGAPRLMITHIVNRDFKSYAGRKVLGPFHKRFSCIIGPNGSGKS
NVIDSMLFVFGYRAQKIRSKKLSVLIHNSDEHQDIQSCTVEVHFQKIIDKEGDDYEVIPN
SNFSVSRTAYRDNTSVYHISGKKATFKDVGSLLRSHGIDLDHNRFLILQGEVEQIAMMKP
KGQTEHDEGMLEYLEDIIGCARLNEPIQVLCRRVELLNEHRGEKLNRVKMVEKEKDALEG
EKNLAIEFLTLENEIFQKKNHVCQYYIYDLQKRIAEMENQKNKIHEDTKEINEKSSKLSS
DMKEKNKAVKDVEKKLNKITKYIEENKATFTKLDLEDVQVREKLKHAKSKAEKLEKQLQK
DKEKVEGFKNVPAKSEKIIAETTTRSNTLEKEKEKEEKKLKDVMDSLKQETQGLQKEKES
QEQKLMTFSKSVNEARSKMDVAQSELDIYLSRHKTAVSQFDKAKEALVTASETLKERKAA
VREIEVKLPQAERELSEKEKELQKLAQEETNFKSLVRDLFQKVEEAKSSLAMTRSRGKVL
DAIIQEKKSGRIPGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVESIDTAQECVNFLKR
QNIGVATFIGLDKMAVWAKKMGRIQTPENTPRLFDLVTVKDEKIRQAFYFALRDTLVADS
LDQATRVAYQSDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSSVITEISEEQVNKME
VQLQKESQRAAQVQEQKGQLEEAVLKLRQSAREMRNTLEKFTASIQHLSEQEEYLNVQVK
ELEANVLATAPDKKQQKLLEENVKAFKAEYDRVAEKAGKVEAEVKRLHDLIIEINNHKLK
AQQDKLDKINKQLDECASAITKAQVAIKTADRNLKKAEDTEFRTKKEIKDTEKEVNDLIA
ELKGLENRAAEVVQNTNAAEESLPEIQKEHRTLLQELKLIQESEHALQKDALGIKLKLEQ
IDGHIAEHNSKIKYWQKEISKISLHHIEGNPVREIPVLSPEDLEAIKNPDSITSQIALLE
AQCHEMKPNIGAIAEYKKKEELYLQRVAELDQITSERDNFRQAYEDLRKQRLNEFMAGFS
IITNKLKENYQMLTQGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSS
LALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISD
RLIGIYKTYNITKSVAVNPKEIASKGLC
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgaggacccccggccagcggcggccgtcgcggcgcgcgcgacccggcgccc
cccagccccgacgagacgggccgcgccgccgagccgccgccgccaacgcccccgtcgggc
gccgcagagcccgagccggcgcccccggagcccgagcacgatggccgcagtctgcaggac
atcctgggcggcattgagccgccgccgccgcccgccatggccagcgaggcgggcgcgccg
cgcctcatgatcacgcacatcgtcaaccgcgacttcaagtcgtacgcgggccgcaaggtg
ctgggccccttccacaagcgtttttcctgtattattgggccgaacgggagcggcaagtcc
aacgttattgattccatgcttttcgtgtttggctaccgagcacagaaaataagatctaaa
aagctctcggtcttgattcacaattctgatgagcaccaggatattcagagttgtacggtc
gaggtgcattttcaaaagatcatcgataaggaaggggatgattatgaagtcatccctaac
agtaacttctccgtgtccagaaccgcgtacagggataacacttctgtctatcacataagt
gggaagaaggcaacatttaaggatgtgggaagccttctcagaagccatgggattgacttg
gaccataatagatttttaatcttgcagggggaagttgagcagatcgccatgatgaagccc
aaaggccagacggagcatgacgagggcatgctggagtacctggaggacattattggctgt
gcacgactcaacgagcccatccaggtcttatgccggagagtggaattgttgaatgagcac
agaggagagaagttaaacagagtgaagatggttgaaaaggaaaaggatgccttggaagga
gagaagaacttagccatcgaatttcttaccttggaaaatgaaatatttcaaaaaaagaat
cacgtttgtcagtattacatttatgacctgcaaaaacgaattgctgaaatggaaaatcag
aagaacaaaattcatgaagatactaaagaaatcaatgagaagagcagtaaactgtctagt
gacatgaaggagaagaataaagctgtgaaagacgtagagaagaagctgaataaaatcaca
aaatatattgaggagaacaaagcaacatttacaaagctagatttggaagatgttcaagtt
agggaaaaattgaaacatgctaaaagtaaagcagaaaaactggagaaacaacttcaaaaa
gataaagaaaaggttgaaggatttaaaaatgtaccagccaagagtgaaaagattatagct
gaaacaacaactcggagcaatacccttgagaaggaaaaagagaaagaagagaagaaacta
aaggacgtcatggatagtctgaaacaggaaacacaagggcttcagaaagaaaaagaaagt
caagaacagaaacttatgactttcagcaaatcagtcaatgaagcgcgttcgaagatggat
gtcgcccagtccgagctcgacatctatctcagtcgccacaagaccgccgtctcgcagttc
gataaggccaaggaagcgctcgtcacagcctcggagacgctgaaggaaaggaaagctgcg
gtccgagagatcgaggtgaaacttccgcaggctgagcgggaactgtcggagaaagaaaaa
gagcttcaaaaacttgcacaagaagaaacaaacttcaaaagtttggttcgcgatcttttt
caaaaagtcgaagaagcaaagagttccttagcaatgacccgaagtaggggcaaggtcctt
gatgcaatcattcaggaaaagaagtctggccggatccccgggatatacggacggctgggg
gacttgggagcaattgatgaaaaatatgatgttgccatttcgtcttgttgtcacgcgcta
gactacattgttgttgagtccattgatacagcccaggaatgtgtgaacttccttaaaaga
caaaatattggagttgcgacttttatagggttagataagatggcagtgtgggccaagaag
atgggcagaattcagactcctgaaaatactcctcgtttatttgatttagtaacagtgaaa
gacgagaaaattcgccaagctttttactttgctctgcgggataccttggtcgccgacagc
ttggatcaagccacaagagtagcgtatcagagtgaccggaggtggcgggtggtgactctg
cagggacagatcatagagcagtcaggtaccatgacgggaggtggcagcaaagtgatgaaa
ggcaggatggggtcctcagtcatcaccgagatctccgaggagcaggtaaataaaatggaa
gtacagttgcagaaagagtctcagcgagcagcacaagtccaagagcagaaaggacagctg
gaggaagcggtgctgaagctgcggcagagcgccagggaaatgaggaacacgctggagaag
ttcacagcgagcattcagcatttatcagagcaagaagaatatttgaatgtacaagttaaa
gaacttgaagctaatgtacttgctacagcccctgataaaaagcagcagaaattgctggaa
gagaacgttaaagctttcaaagcggagtatgaccgtgtggctgagaaggctggtaaggtt
gaagctgaagtgaagaggctgcatgacctcatcatagagatcaataaccataagctcaag
gcccagcaagacaagcttgataaaataaataagcaactggatgaatgtgcttctgccatt
acgaaagcccaagtagcgatcaagactgcagacagaaatcttaagaaagcagaagatact
gagtttcgcacaaagaaagaaataaaagatactgagaaagaagtgaatgacttaatagca
gaactgaaaggcttggagaacagagcggcagaagtcgtacagaacacaaacgcggcggag
gaatctttaccagagatccagaaagaacaccggactctacttcaagaactgaaactgatt
caagaaagtgagcatgctctccaaaaagatgcacttggcattaagttgaaacttgaacaa
atagatggccatattgctgaacataactctaaaataaaatattggcaaaaagagatttca
aaaatatcattgcatcacattgaaggtaatcctgtcagagaaattccagttctaagccca
gaggaccttgaagccatcaagaacccagattcaataacaagtcagatcgcacttttggaa
gcccagtgccatgaaatgaagccaaacatcggtgccattgcagaatataagaagaaggaa
gaattatatttacaacgggtagctgaattggaccaaattacttctgagagagataatttc
agacaggcgtatgaagatcttcggaagcagaggcttaatgaattcatggcaggcttttct
ataataacgaacaaattaaaggagaattaccagatgcttactcaggggggcgatgctgag
ctggaactggtggacagtctggaccctttctcagaaggaatcatgttcagtgttcggcca
cccaagaaaagttggaagaagatctttaacctttcaggaggagaaaaaacactgagttcg
ttggcattagtatttgctcttcaccattacaaacccacacccctgtacttcatggatgag
attgatgctgcccttgattttaaaaatgtgtccattgttgcattttatatatatgaacaa
acaaaaaatgctcaattcatcataatttctcttcgcaataacatgtttgaaatttcagat
agacttattgggatttacaagacgtacaatataacaaaaagtgttgcagtaaaccccaaa
gaaattgcatctaaaggactctgttga
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