Sorex fumeus (smoky shrew): 130023810
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Entry
130023810 CDS
T10594
Symbol
EFL1
Name
(RefSeq) elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130023810 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfum03009
]
130023810 (EFL1)
Ribosome biogenesis [BR:
sfum03009
]
Eukaryotic type
Pre-60S particles
GTPases
130023810 (EFL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
EFG_IV
Phlebo_G2_C
Motif
Other DBs
NCBI-GeneID:
130023810
NCBI-ProteinID:
XP_055970400
LinkDB
All DBs
Position
Unknown
AA seq
1105 aa
AA seq
DB search
MALGTVDRVVRLQRDPARIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQIRGITMKASAISLHYAAGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERETESQVNAHSEQGEQVYDWSSGLEDTDDSHLYFSPDQGNVVFASAIDG
WGFGIEHFAEIYSKKIGIKKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILEN
IWSLYEAVLKKDKEKIDKIVTSLGLKMGAREARHSDPRVQINAICSQWLPVSQAVLAMVC
QKLPSPLEITAERVEKLMCTGSQTFDSLPPETQALRAAFLKCGSEDTDPVIIFVSKMFAV
DAKVLPQNKPRPLTQEEMAERRERARRRHAEKLAAAQGQATSEVTQDGNSPEDGPRGAEP
EGNEPQVESLPLKAVAQEGDSPELFIAFARVFSGVARKGKKIFVLGPKYSPVEFLRRVPS
GFSTPLEDLPAVPHMACCSLENLYLLMGRELEDLEEVPPGNVLGIGGLQDFVLKSATLCS
SPCCPPFIPLSFEATPIVRVAVEPKHPSDMPQLVKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIEISASEPIIPFRETVTKPPKVDMVNEEIGRQQKIAVIHQ
AKEDQNKVPDGVHIDADGLVTIMTPNKLAELSVRAMPLPEEVTQLLEENSDLIRSMEQWT
SSLNEGKNSQRIDQKTQEKIQEFKEKLEQHLTGRKWRNTVDQIWSFGPRKCGPNMLVNRS
EDFEGSVWAGLAGACPREARQYRDLGNSIVSGFQLATLAGPMCEEPLMGVCFVLEKWDLS
QFKEQAASEAQNPEGHPEGEGPEEKRPALRGDPPLPDCYGPFSGQLIATMKEACRHALQA
KPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFTIKAVLPVAESFG
FADEIRKKTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVR
KRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggactgtggaccgggtggtccggctgcagcgggacccggcgcggatccgc
aacatctgcgtgctggcgcacgtggaccacggaaaaactactctggcggactgtcttata
tctagcaatggaatcatttccagccgcttggcaggcaagttgcggtacatggacagcaga
gaagatgagcagatccgaggcatcaccatgaaagccagcgccatctccctgcattacgca
gcaggcaatgaggaatacctgattaatttgatagactccccaggacacgtggatttctcc
tcagaagtatctactgccgtgcgcatttgtgatggctgcatcatcgtggtagatgctgtg
gaaggagtctgtccacagacacaggcagttctgcgacaagcctggcttgaaaacatccgt
ccggtcttagtgattaataagatagatcgcttgatagtagaactgaagttcaccccacag
gaggcctattctcacctcaagaatattctagaacagataaatgcactcacaggaactctt
tttacttctaaagtcctagaagaaagagcagagagagagactgagtcgcaagtgaacgca
cactcggagcaaggagagcaggtgtacgactggagcagtggcttggaggacacggatgac
tcgcacctctacttctctcccgatcagggcaatgtggtgtttgccagcgccatagatgga
tggggctttggaatcgagcactttgcagaaatctacagtaaaaaaattggcatcaaaaag
gaagttctcttgaaaaccttgtggggagattattatataaatatgaaggccaagaagatc
atgaaggtggatcaggcaaaaggaaagaaacctttgtttgtgcagttgatcctggaaaat
atatggagtttgtatgaggctgtcttgaaaaaagacaaagagaagatagataaaattgta
acttccctaggattgaaaatgggagctcgggaggctcgccattcagaccctcgagtacag
atcaatgccatttgcagccagtggctgcctgtctcccaggctgtgctggcgatggtgtgc
cagaagctccccagtccccttgagatcacagctgagcgagtggagaaactgatgtgcacg
ggctcccaaaccttcgactcgctgcccccggaaacccaggcactgagagcagcttttctg
aaatgtggaagtgaagatactgatccagttatcatctttgtgtccaaaatgtttgccgtc
gatgccaaagtgctgcctcagaataaacccaggcccctcactcaagaagaaatggcagag
cggcgggaacgtgccagaaggcgtcatgcggaaaaactagcagctgcacaggggcaggcc
acctctgaggtcactcaggatgggaacagccctgaagatggtccccggggagcagagcca
gaaggtaatgagccgcaggtggagagtcttcccctcaaagctgtggcccaagaaggagac
agcccagagcttttcattgcctttgcccgtgtcttcagtggtgtggctcgaaaaggaaag
aaaatatttgtcttgggacctaagtacagtcctgttgagtttttacggagggtgccatca
ggcttttctacccccctcgaggacctgcctgctgtcccccacatggcctgctgctctctg
gagaacctgtatcttctgatggggcgtgagctggaggacctggaagaggtgcctccagga
aacgtgctggggataggcggccttcaggattttgtgctgaagtcagcgaccctctgcagt
tcgccctgctgccccccattcatcccactcagtttcgaggccacccccatcgtcagggtc
gccgtggagcccaagcacccaagtgacatgcctcagcttgtcaaaggaatgaagctgctg
aaccaggctgacccctgtgtccagattctcattcaggagacgggtgagcatgtcctggtc
acagccggggaggtgcacctccagcgatgcctagacgacttgaaagaacggtttgcaaag
attgaaatcagtgcatctgaacccattattccattcagagaaacagtcacaaaacctccc
aaagtcgacatggtcaatgaagaaataggcagacagcagaagatcgccgtcatacaccaa
gcaaaggaagaccagaacaaagtccctgatggggtccacattgatgccgatggactcgtc
accatcatgacccccaacaaacttgccgagctcagtgttcgagccatgccccttccagaa
gaagtcacccagcttcttgaagaaaatagtgacttgattcgttccatggagcagtggaca
tcctctttgaatgagggcaaaaactcccagcggattgaccagaagacccaggagaaaatt
caggaatttaaagaaaaactagagcagcacctcacagggagaaagtggaggaacactgtt
gaccaaatctggtcatttggcccgagaaaatgtgggcccaacatgctggtgaacaggagc
gaggacttcgagggctcggtgtgggccggcctggcaggcgcatgtccccgagaagcccgg
cagtaccgagacctgggcaacagcatcgtgagcggcttccagctagccaccctcgccggc
cccatgtgtgaggagccactcatgggggtctgctttgttctggaaaagtgggatctcagt
cagttcaaggagcaagcagccagtgaggcgcagaacccagaaggccatcctgagggagaa
gggcctgaagagaagaggccggccctgagaggagaccccccgctcccagactgctatggg
cccttctcagggcagctcattgccaccatgaaggaggcctgtcgccacgccctgcaggcc
aagcctcagcggctgatggcagccatgtacacgtgcgacatcatggccacaggcgacgtg
ctgggccgggtctatgctgtcctgtccaagagagaggggcgcgtgctgcaggaggagatg
aaggagggcacggacatgttcaccatcaaggccgtgctgcccgtcgctgagagctttggc
ttcgcagacgagatccgcaagaagaccagcgggctggctagcccgcagctggtgttcagc
cactgggagatcatccctagcgaccccttctgggtgccgactaccgaggaggagtatttg
cactttggggagaaggcggactctgagaaccaggcccggaagtacatgaatgctgtgcgg
aagcggaaggggctgtacgtggaggagaagattgtggagcacgcagagaagcagaggacc
ctcagcaagaacaagtag
DBGET
integrated database retrieval system
