Sorex fumeus (smoky shrew): 130023812
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Entry
130023812 CDS
T10594
Symbol
ARNT2
Name
(RefSeq) LOW QUALITY PROTEIN: aryl hydrocarbon receptor nuclear translocator 2
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum05200
Pathways in cancer
sfum05202
Transcriptional misregulation in cancer
sfum05211
Renal cell carcinoma
Brite
Transcription factors [BR:
sfum03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130023812 (ARNT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS
PAS_3
PAS_11
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
130023812
NCBI-ProteinID:
XP_055970401
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MATPAAASPAEMASDMPSSVALPVAPMAAAGQVRMAGALPGRGGKRRSGMDFEDEDGEGP
SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTG
NKSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFG
STLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR
MRCGNAPLDHLPLNRITTMRKRFRNGLGPVKEGEPQHAVVHCTGYIKAWPPAGMTIPEED
ADVGQGSKYCLVAIGRLQVTSSPVCMDMSSMAVPTEFLSRHNAEGIITFVDPRCISVIGY
QPQDLLGKDILEFCHSEDQTHLRESFQQVVKLKGQVLSVMYRFRTKSREWVLIRTSSFTF
QNPYSDEIEYIICTNSNVKQLQQQQAELEVHPRDGLSSYDLSQVPVPSIPAGVHEASKSV
EKADTLFSQERDPRFAEMFAGISASEKKLMSSAAAGSQQMYPQGSPFPAGHSGKAFSSSV
VHVPGVSDLPSSSSSSQNMAQISRQLGQGQVAWTGTRPPFPGQLPSQSSKTQTSPFGIGT
SHSYPADPSSYSPLSSPATSSPSGSAYSGLANRTPGFADSGQSSGQFPGRPSEVWSQWQS
QHHGQQSSEQHPHPQPGQTEVFQDMLPMPGDPTQGTGSYNIEDFADLGMFPPFSE
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggccacgccggccgccgccagccccgcggaaatggcttcggacatgcccagctccgtg
gcgctgcccgtggcccccatggcggccgccgggcaggtgaggatggcgggggccttgcct
ggccggggaggaaagagacgctctgggatggactttgaggacgaagatggtgaagggccc
agcaaattctcaagagagaaccacagcgagatcgagcggcgccggcggaacaagatgacg
cagtacatcactgagctgtcggacatggtgcccacgtgcagcgcgctggcccggaagccc
gacaagctgaccatcctgcgcatggctgtgtcacacatgaagtccatgcggggcaccggc
aacaagtccactgacggcgcctacaagccgtccttcctcactgagcaggaactgaagcat
ctcatcctggaagctgcggatggctttctgtttgtggtggcagccgagacggggagggtg
atctacgtgtccgactcggtcacccccgttctgaaccagccgcagtcggagtggttcggg
agcacgctgtacgagcaggtgcaccccgacgacgtggagaagctgagagagcagctgtgt
acctcggaaaactccatgacaggccgcatcctggacctgaagacaggaacagtgaagaag
gagggacagcagtcgtccatgcgcatgtgcatgggctcacgccggtccttcatctgcagg
atgaggtgtggcaatgcccccttggaccacctcccgctgaacaggatcaccaccatgcgg
aagaggttcaggaacggcctcggtcccgtgaaggagggggagccccagcacgccgtggta
cactgcacgggctacatcaaggcgtggccccccgcaggaatgaccattcccgaagaggac
gccgacgtgggacagggcagtaaatactgcctggtggccattgggcggctccaggtgacc
agctcacccgtgtgcatggacatgagctccatggcagtgcccacggagttcctctcacgc
cacaacgccgagggcatcatcaccttcgtggacccgcggtgcatcagcgtcatcggctat
cagccccaggatctccttgggaaggacatcttggagttttgccactcggaggaccagacc
cacctgcgggaaagcttccaacaggtggtgaagctcaagggccaggtgctgtcggtcatg
taccgcttccgcaccaagagccgcgagtgggtgctgatccgcacgagcagcttcaccttc
cagaacccctactcggacgagatcgagtacatcatctgcaccaacagcaacgtcaagcag
ctccagcagcagcaagcagagctggaagtgcacccgagggacgggctgtcatcctatgac
ctgtctcaggtgcccgtgcccagcatccctgcaggtgtccacgaagccagcaagtctgtg
gagaaggctgacaccctcttctctcaggaaagggacccccggtttgccgaaatgtttgca
ggtatcagtgcatcggagaagaagctgatgagctcggctgccgcagggagccaacagatg
tacccccagggaagcccttttcccgccggccactcgggcaaagccttcagctcctcggtg
gtccacgtgccgggggtgagcgacctcccgtcctcctcctcgagcagtcagaacatggcc
cagatctcccggcagctgggccagggccaggtggcatggacggggacccggccgcccttc
ccaggacagctgccttctcagtccagcaagacccagacttcacccttcgggattgggaca
agccacagctacccggcggacccctcctcctacagccccctctccagcccggccacctcc
tcgcccagcggcagcgcctactccggcctcgccaacaggacaccaggctttgcagacagc
gggcagagcagcgggcagttcccaggacggccctcggaagtgtggtcccagtggcagagc
cagcaccacggccagcagagcagcgagcagcacccacacccacagcctggccagacggag
gtgttccaggacatgctgcccatgccgggggaccccactcaggggacgggcagctacaac
atcgaggacttcgcggatctgggcatgttcccgcccttctcagagtag
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integrated database retrieval system
