Sorex fumeus (smoky shrew): 130023907
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Entry
130023907 CDS
T10594
Symbol
UBE3B
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130023907 (UBE3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfum04121
]
130023907 (UBE3B)
Enzymes [BR:
sfum01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130023907 (UBE3B)
Ubiquitin system [BR:
sfum04121
]
Ubiquitin ligases (E3)
HECT type E3
130023907 (UBE3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
130023907
NCBI-ProteinID:
XP_055970447
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREGRLVQKERERAAVGIQAHVRGFLCRTRLQRSIRREIDDY
FEDEDSGSNRRSALGVFKIARKLLFVFRFKKDNERFEKLCRCILSSMDAENEPKMSYESL
ALCKDLTLLWIKQIKDILWYCCEFLQQLKPEILHDSRLVTLYLTVLVTFTDTSTWNILRG
KGESLRPAMNHICANIMGHLNQRGFYPVLQTLLTRGLARSRPCLSKGPLTAVFSLALRPV
VAAQFSDNLLRPFLIYIMSVPALVTHLSTVTPERLGILESHDMLRKFIHYLRDEHRCSDV
CESLEGCHTLCLMGNLLHLGSLSPRVLEEETDGFVRLLTQMLCYCQRYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMPLITKQLQFLWGVPLIRTLFCDILSKKLQESQEPAPVPPASP
QNVLPVKSLLKRAFQRSASVRNILRPVGGRRVDSAEVQKVCSTCVLYQTSLTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFLECLSNDSEESKQLLAMLMLFSDCSRHLI
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGEKLELFQSVHGWLMV
LYERDCRRSFAPEDHWLRKDLKPSVLFQELDKGRKRAQLVLQYIPHVIPHKNRVLLFRNM
VIKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSHHTMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYDGDI
ADLGLTLSYDEDVMGQLVCHELIPGGKTIPVTNENKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIRPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAVSMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgtttctcagacctcaagagcgtggttcatcgacagagcccgccaggctcga
gaggggcggctcgtgcagaaggagcgggagcgggcggccgtgggaatccaggcccacgtc
cggggtttcctctgtcggactcgactgcagagatcgatcaggagagagattgatgactat
ttcgaagacgaagactctgggtccaatagaagaagtgctcttggtgtttttaagattgcc
aggaagctgctatttgtgttcagatttaaaaaggacaatgagagatttgagaagttgtgt
cgctgcatcctgagcagcatggacgccgagaacgagccgaagatgtcgtacgagtccctt
gccctctgcaaggacctgaccctcctgtggattaaacagatcaaggacatcctgtggtat
tgctgtgagtttcttcagcagctcaagcctgaaattttacatgactccagacttgtgacg
ctgtacctcacagtgcttgtcaccttcacagacacttccacctggaatattctccggggc
aaaggggagagccttcggcccgccatgaaccacatctgtgcgaatataatgggacacctc
aaccagcgtggcttttatcctgtgctccagaccctgttgacccgtggcctggcgagatcc
cgaccttgcctgtccaaaggcccgctgacggccgtcttttccctcgccttgcgccctgtg
gtcgcagcgcagttctcagacaatctgcttcgaccgtttctcatctacatcatgtccgtg
cctgcccttgtgactcacctcagcaccgtgacccctgagcgccttggcatcttagaatct
catgacatgctccgtaaattcattcactatttaagagatgaacatcgatgctctgacgtg
tgtgaaagtctggagggatgccacactctttgcctgatgggcaacctcctgcacctgggc
tccctcagcccccgagtgctggaggaggagacggatgggttcgtgcgtctgctcacccag
atgctgtgctactgccagaggtacgtgtcccagaagaagtccaacctgacccactggcac
cccgtcctcggctggttctcccaatccgtagactacggcctcaacgagtctatgcccttg
atcaccaaacagctgcagttcctgtggggggtgcccctgattcggaccctcttctgtgac
atcctgagcaagaagctgcaggagagccaggagccagcgccggtgccgccggcctccccc
cagaatgtgctgcctgtgaagagtctcctgaaacgcgccttccagagatccgcctccgtc
cgcaacatcctcaggcccgtggggggccggcgcgtggactccgcggaggtgcagaaggtg
tgcagcacctgcgtcctctaccagacctcgctgaccacgctcacgcagatccggctgcag
atcctcacaggtctcacataccttgacgacctgctgcccaagctctgggcctttatctgt
gagctggggccccacgggggcctgaagcttttcctggaatgcctcagcaacgactccgag
gagtccaagcagctcctggccatgctgatgctgttctccgactgctcccggcacctcatc
acgatcctcgatgacatcgaagtctacgaagagcagatttcgttcaagctggaagagctg
gtcaccatctcctcgttcctgaattcctttgtgtttaagatgatctgggatggcatcgta
gagaatgccaagggcgagaagctggagctgttccagtccgtgcacgggtggctgatggtg
ctctacgagcgggactgtcggcggagcttcgcccccgaggaccactggctgcggaaggat
ctcaaacccagcgtgcttttccaagaactggacaagggccggaagcgggcgcagctggtc
ctgcagtacatccctcacgtcatcccccacaaaaaccgggtgctcctgttccgaaacatg
gtcatcaaggagaaggagaagctggggctggtggagaccagctctgcctccccccacgtc
acgcacatcaccatccgccgctcccggatgctggaggacggttacgagcagctccggcag
ctctcccaccacaccatgaagggcgtgatccgggtgaagttcgtcaacgacctcggggtg
gacgaggccggcatcgaccaggacggcgtcttcaaggagttcctggaggagatcatcaag
agggtgttcgacccggcgctcaacctgttcaagaccaccagcggggacgagagactctac
ccctcgcccacgtcctacattcacgagaattacctgcagctcttcgagttcgtgggcaag
atgctgggcaaggccgtgtacgagggcatcgtggtggacgtgcccttcgcctccttcttc
ctgagccagctgctcgggcaccaccacagcgtcttctacagctccgtggacgagctcccc
tctctggactcggagttctacaagaacctcacctccatcaagcgctacgacggggacatc
gctgacctggggctgactctgtcctacgatgaggacgtcatgggtcagcttgtctgccac
gaactgattcctggagggaagaccattcctgttacaaatgaaaataaaatcagctacatc
catctgatggcacatttccggatgcacacgcagatcaaaaaccagacggctgccctcatc
agcgggttccgttcaatcatcagacccgaatggatccggatgttctccacccccgagctg
cagcgtctcatctcgggtgacaatgcggagattgacctggaagatttaaagaagcacacg
gtgtactatggcggcttccacggaagccacagggtcatcatctggctctgggatatcctg
gcgtccgacttcacgcccgaggagagggccatgtttctgaagtttgtcaccagctgctcc
cggcccccgctcctgggattcgcctacctcaagcctcctttctccatccgctgcgtggaa
gtctccgacgaccaggacaccggggacacgctgggcagcgtcctccgcggcttcttcacc
atccgcaagcgggagcccggcggccggctgcccacctcctccacctgcttcaacctgctc
aagctgcccaactacagcaagaagagcgtccttcgggagaagctgcgctacgccgtcagc
atgaacacgggcttcgagctctcctag
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integrated database retrieval system
