Sorex fumeus (smoky shrew): 130023940 Help Entry 130023940         CDS       T10594                                  Symbol OPTN Name (RefSeq) optineurin   KO K19946   optineurin Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04137   Mitophagy - animal sfum04140   Autophagy - animal sfum05014   Amyotrophic lateral sclerosis sfum05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     130023940 (OPTN)    04137 Mitophagy - animal     130023940 (OPTN)  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     130023940 (OPTN)    05022 Pathways of neurodegeneration - multiple diseases     130023940 (OPTN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfum04131]     130023940 (OPTN) Membrane trafficking [BR:sfum04131]  Exocytosis   Small GTPases and associated proteins    Rab associated proteins     130023940 (OPTN)  Protein recycling   Rab GTPases and associated proteins    Other Rab GTPase associated proteins     130023940 (OPTN)  Autophagy   Mitophagy    PINK1-Parkin associated proteins     130023940 (OPTN)   Xenophagy    Cargo receptors     130023940 (OPTN) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CC2-LZ NEMO zf_C2H2_10 Motif Other DBs NCBI-GeneID:  130023940 NCBI-ProteinID:  XP_055970493 LinkDB All DBs Position Unknown AA seq 572 aa AA seqDB search MSHQPRVCRTEKGDSSSEATGNGPPSLAHPNLDTFTPEELLQQMKELLTENHQLKEAMKL NNQAMKGRFEELSAWTEKQKEERLFFETQSREAKERLLALSQENEKLKEEIRTLKGRTER TLEDPCKDPRVPTAEGEREVEQLKTQVGRLQAEKADLLGIVSELQLQLGSGTSSSEDSFV EIRMTEGGVDVATKDLNPNPRPARADPLDTSKSAEGPRNHLESEELTVSQLLLCLREGNQ KVESLELALREAKERISYYEKRVPTHAETETQTEGCTDREDEEEQGPESVGSEVQMLNLQ VTNLFKELQEAHTKLSEAELMKKRLQEKCQALERKNSASPSELNEKQELIYKNRKLELQV ESMRSEIQMEQAKTEEEKARLAALQTAHSTLLQEHNHTLRTVEELGRKESERVERAEVQE LREKLEAAEKALAAKQLQMDEMKQTIARQEEGLETMGVLRAQMEVYCSDFHAERAAREKI HEEKEQLALQLALLLKENDAFEDGSRQSLMEMQSRHGARAGDSELQTYLVPRGAEDRNWP PPRTLPIHSCPKCGEVLPDIDTLQIHVMDCII NT seq 1719 nt NT seq  +upstreamnt  +downstreamnt atgtcccaccaaccacgtgtctgccggactgaaaagggggacagctccagtgaggccacc ggaaatgggccccctagcctggcccacccgaacctggacacgttcacacccgaggagctg ctgcagcagatgaaggagctcctcactgagaatcatcagctgaaggaagccatgaagctg aataaccaggccatgaagggacgcttcgaggagctgtctgcctggacagagaaacagaag gaagaacgccttttctttgagacccagagccgagaagccaaagagcgcctgttggctttg agtcaagaaaatgaaaaactgaaggaagaaattagaaccctcaaagggagaacagagagg accctggaggacccctgtaaggaccccagggtccccacagctgaaggggaacgggaagtg gagcagctgaagacgcaggtggggcgcctgcaggctgagaaggccgacctgctgggcatc gtgtctgagctccagctgcagctgggctcgggcaccagctcctccgaggactccttcgtg gagatccggatgaccgaaggaggggtggacgtggccacgaaggacctgaatcctaacccc aggcccgcccgggcggatcccttggacacgagcaaatcagcggaaggtcccaggaatcat ctggaatctgaggaattaactgtgagtcagctcctcctctgtctgcgagaaggaaaccag aaggtggagagcctcgaactcgcactcagggaagccaaggaaagaatttcctattatgaa aagcgagtccccactcacgctgagaccgagacgcagacagaagggtgcacagaccgcgag gatgaagaggagcagggcccagagagtgtggggagtgaggtccaaatgctgaacctgcag gtgacgaacctgttcaaggagctgcaggaggcgcacacgaagctcagcgaggcggagctg atgaagaagaggctgcaggagaagtgtcaggccctcgagaggaaaaattctgcaagcccg tccgagctgaatgagaagcaggagctcatctacaagaacagaaagttggagctccaggtg gagagcatgcggtcagaaatccagatggagcaggcgaaaaccgaggaggagaaggccaga ttggccgctctgcagacggcgcacagcaccttgctccaggaacacaatcacactctgagg actgtcgaggagctcggaaggaaagagtcagagagagtggagagggcggaggtccaggag ctgcgggagaagctggaggcggcggagaaggccctggcggccaagcagctgcagatggac gagatgaagcagaccatcgcgaggcaggaggaggggctggagaccatgggtgtgcttcgg gctcagatggaggtttactgctcggactttcatgctgagagggcggcgagagagaagatt cacgaagagaaggagcagctggccctacagctcgcgcttctgctgaaggagaatgacgcg tttgaggatggcagcaggcagtccctcatggagatgcagagccgccacggggcgcgtgca ggtgactcggaactacagacgtatctggtcccgagaggagccgaggatcggaactggccg ccgccgcggaccctgcccatccactcctgccccaagtgcggagaagtcctcccagacatc gacacactccagatccacgtcatggactgcatcatctag

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