Sorex fumeus (smoky shrew): 130023954 Help Entry 130023954         CDS       T10594                                  Symbol VIM Name (RefSeq) vimentin   KO K07606   vimentin Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04820   Cytoskeleton in muscle cells sfum05169   Epstein-Barr virus infection sfum05206   MicroRNAs in cancer Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     130023954 (VIM)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     130023954 (VIM)   09172 Infectious disease: viral    05169 Epstein-Barr virus infection     130023954 (VIM)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sfum03019]     130023954 (VIM)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:sfum04812]     130023954 (VIM)    04147 Exosome [BR:sfum04147]     130023954 (VIM) Messenger RNA biogenesis [BR:sfum03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Factors that have mRNA localization signals      130023954 (VIM) Cytoskeleton proteins [BR:sfum04812]  Eukaryotic cytoskeleton proteins   Intermediate filaments    Intermediate filaments     Type III      130023954 (VIM) Exosome [BR:sfum04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    130023954 (VIM)   Exosomal proteins of other cancer cells    130023954 (VIM) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Filament Filament_head DUF1664 TolA_bind_tri TPR_MLP1_2 DUF7491 Sec10_N GeBP-like_DBD RBD-FIP Laminin_II CENP-F_leu_zip DUF4515 GAS Motif Other DBs NCBI-GeneID:  130023954 NCBI-ProteinID:  XP_055970526 LinkDB All DBs Position Unknown AA seq 467 aa AA seqDB search MSTRSVSSSSYRRMFGGPGSSSSRPSASRSYVTTSTRTYSLGSSLRPSTSRSLYGASPGG AYATRSSAVRLRSAGPGLRMLHDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYID KVRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLS EDIMRLREKLQEEMMQREEAESNLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHD EEIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLS EAANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAMEAANYQ DTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPSFA SLNLRETNLESLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE NT seq 1404 nt NT seq  +upstreamnt  +downstreamnt atgtccaccaggtccgtgtcctcgtcgtcctaccgcaggatgttcggcggcccgggcagc tcgagcagccggccgagcgccagccgtagctacgtgaccacgtccacccgcacctatagc ttgggcagctcgctgcgccccagcaccagccgcagcctgtacggcgcgtcccccggcggc gcgtacgccacccgctcgtccgccgtgcgcctgcggagcgccgggcccgggctgcggatg ctgcacgactcggtggacttctcgctggccgatgccatcaacaccgagttcaagaacacg cgcaccaacgagaaggtggagctgcaggagctcaacgaccgcttcgccaactacatcgac aaggtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaag ggccagggcaagtcgcgcctgggggacctgtacgaggaggagatgcgggagctgcgccgg caggtggaccagctcaccaacgacaaggcccgcgtggaggtggagcgcgacaacctgagc gaggacatcatgcggctccgggagaagttgcaggaggagatgatgcagagagaggaagcc gagagcaacctgcagtccttcagacaggacgtggacaatgcttctctggcacgtctggac cttgaacgcaaagtggaatcattgcaggaagaaatcgccttcttgaagaaactgcatgat gaagagatccaggaactgcaggcgcagattcaggaccagcatgtgcagatcgacatggat gtgtccaagcctgacctcacggcagccctgcgtgacgtgcgtcagcagtacgagagcgtg gccgccaagaacctgcaggaggctgaggagtggtacaagtccaagtttgctgacctctct gaggctgccaaccgcaacaacgatgccctgcgccaggcaaagcaggagtccaatgagtac aggagacaagtgcagtccctcacctgcgaagtggatgctctgaaaggaactaatgagagt ctggaacgtcagatgcgggaaatggaagagaactttgctatggaagctgccaactaccaa gacactattggccgtctgcaggacgagattcagaacatgaaggaggagatggctagacac ctccgtgaataccaggacctgctgaatgttaagatggctcttgacattgagattgccacc taccggaagctgctggaaggcgaggagagcaggattgctttgcctcttcccagctttgct tccctgaacctgagagaaaccaatctggagtccctccctctggtggacacacactccaag agaacacttctgattaagaccgttgagacccgagatggacaggttatcaacgaaacttcc cagcatcatgatgacctggagtga

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