Sorex fumeus (smoky shrew): 130024044
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Entry
130024044 CDS
T10594
Symbol
USP6NL
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130024044 (USP6NL)
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130024044 (USP6NL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
130024044
NCBI-ProteinID:
XP_055970645
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MIQVLQMVKELMTPPWQRAATVKEDTDQDVALRLAQERAEIVAKYDRGREGAEIEPWEDA
DYLVYKVTDRFGFLHEEELPYHNAAMERQKQLEIERTTKWLKMLKGWEKYKNTEKFHRRI
YKGIPLQLRGEVWALLLEIPKMKEETRDLYSKLKLRARGCSPDIRQIDLDVNRTFRDHIM
FRDRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYMNEEDAFWALVKLFSGPK
HAMHGFFVHGFPKLLRFQEHHEKILNKFLSKLKQHLDAQEIYTSFYTMKWFFQCFLDRTP
FTLNLRIWDIYIFEGERVLTAMSYTILKLHKKHLMKLSMEELVEFLQETLSKDFFYEDDF
VIEQLQISMAELKRAKLDLPEPGKEEEYPKKPLGQLPPESQPPAVCHLSNGQKSVGKASP
HVSDRRESDSSPRKKLESPVHQQSRGGTPERARHPRAKALDEANRRLKDEADLRKKVTPP
FQDNSTQYNHAAANQNSNATSQGRREFVPRWNKPADSSAPDSSTKQVLNRSAPPALTVTG
PSSEARLANGNGHGRQKMRAPGTDDEKRGSNASQYDNVPENDNGACVEEALERAVAHPHS
PRRQAAEPNTPVRLPYSRYAAQLEGADRGPVPPPSYSHPPGYRGDSPQAPSSRRPYPSAL
SAHTSPDRPSGRPTPIVLPSNRIEVLPVDFGAGGYSGSSGSPQHGAFIIPPVDYLPDDRK
WSEVSHTYRPEVHGQSWTQEARRNHQGHLTKFPTFQQGPFQDHSLPPVSVDSPVRYRTSP
ALNDAGSSSGFQCSGPSPAAYHYRNRDRLAIQESVLL
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgattcaggtcctgcagatggtgaaagagctcatgacccccccatggcagagagcggcc
acggtgaaggaagatacagaccaagatgtagccctcagacttgcccaggagagagctgag
atcgtagctaagtatgaccgaggacgagaaggtgcagagattgaaccttgggaagatgcc
gattacctggtttacaaagtcacggatagatttggcttcttacacgaggaggagcttccc
taccacaatgcagctatggaacggcaaaaacaactggaaattgaaagaacgactaaatgg
ctgaaaatgctgaaaggctgggaaaaatacaagaatacggaaaagtttcacaggagaatt
tacaaaggaatcccactccagctcaggggggaagtgtgggccctgctcctggagatccca
aaaatgaaagaagaaacaagagatctttatagtaaattaaaactcagagcacggggttgt
tcacctgatatcagacaaatagaccttgatgtcaaccgcacgtttagggaccatattatg
tttagagacagatatggtgtcaagcagcagtccctgttccatgtgcttgccgcgtattcc
atctacaatacggaagttggctactgccagggcatgagccagatcacagccctactcctc
atgtacatgaatgaggaagatgccttctgggccctagtgaagctgttctcaggccccaag
cacgccatgcacggcttttttgtccatggttttcctaaacttttgaggttccaagaacac
catgaaaagatactgaataaatttctctccaagcttaagcagcacttggatgctcaagaa
atctacacaagtttttacacaatgaaatggttttttcaatgttttcttgatcgtactccc
tttacactaaacctcagaatatgggatatctacatctttgaaggagaaagagttctcacc
gctatgtcttatacaatcttaaaattacacaaaaaacatctgatgaaattgtctatggaa
gaactcgttgaatttcttcaggaaaccttgtcaaaggattttttctacgaagatgacttt
gtaatagaacaacttcagatttccatggcggaactaaagcgggcaaaattagaccttcca
gagcctggtaaggaggaagagtatcctaagaaacctttgggacagctaccccctgagtcc
cagcctcctgctgtctgtcacctgagcaacgggcagaagagtgtgggcaaggccagtccc
catgtgagtgacaggagggaaagtgactcctcaccccgcaagaagctcgagtcccccgtc
caccagcagagtcgtggcggaaccccggagcgagccaggcaccccagagcgaaggcgctg
gacgaggccaacagacggctgaaggacgaggctgacctgcggaagaaagtcacccccccg
ttccaggacaattccactcagtacaaccacgcggctgctaaccagaatagcaatgccacc
tcccagggcaggcgggagttcgtgcccagatggaacaagccggccgacagctccgcgcca
gacagcagcaccaagcaggtgctgaaccgctctgctccgcccgccctcaccgtcaccggc
cccagctctgaggcgcgcctggccaacggaaatggccatgggcggcagaagatgcgggct
ccgggcactgatgatgagaagcggggctccaatgcctcccagtacgacaacgtccccgag
aacgacaatggcgcatgtgtggaggaggcactggagagggcggtcgcgcacccccacagc
cccaggaggcaggcggccgagcccaacacccccgtcaggctcccctactcgaggtacgcg
gcacagctggagggtgccgaccgagggccagtgcccccgccctcctacagccacccaccc
gggtaccgcggtgactccccacaggcgccctcatccaggagaccttacccttcggccctc
tcagcccacacttctccagacagaccttccggccgccccacgcccatcgtcctgccttcc
aataggatcgaagtgcttccagtggacttcggtgctggtggctactcaggcagctcaggg
tccccacagcacggggcgttcatcatccctcctgtggattatttgcccgatgaccggaag
tggtcggaagtgagtcacacctacagacccgaagtgcacggccagtcctggacacaggag
gcgaggcgcaatcaccagggccacttgacgaagtttcccaccttccagcaagggcccttc
caggaccacagcctcccccccgtgtccgtggatagccccgtgcgctacagaacttccccg
gcgctgaacgatgccggcagctcgtcggggttccagtgctcagggccctcgccggcggcc
taccactaccgaaaccgagacagactcgccattcaggagtcagtgttgctatga
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