Sorex fumeus (smoky shrew): 130024202
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Entry
130024202 CDS
T10594
Symbol
CRTAM
Name
(RefSeq) cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130024202 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfum04515
]
130024202 (CRTAM)
04090 CD molecules [BR:
sfum04090
]
130024202 (CRTAM)
Cell adhesion molecules [BR:
sfum04515
]
Immunoglobulin superfamily
Nectin family
130024202 (CRTAM)
CD molecules [BR:
sfum04090
]
Proteins
130024202 (CRTAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
ig
Ig_2
I-set
C2-set_3
C1-set
Orf78
DUF4834
Motif
Other DBs
NCBI-GeneID:
130024202
NCBI-ProteinID:
XP_055970813
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MWWTLCTLLLAWFPLQEATLAQPAETLSVEEGQPLELHCMAPHNTSLQWLAPSGFTIFLN
EHSALRSPKYQLLHRSPGQLSVLLLNTSQEDEGVYRCLQYGSSVRTKEVRVVVLATPSQP
AVAASVVSLQDGQEHVEVTCSTSRSKPPPKITWLLGAGLEIYGETHHELDSDGKKWNSTS
TLRVHTHGRTEVVTCVVRHPGLQERTLLAPFPFEDLERGLPKARKLQAGAQPTPPLLLST
MWPKLLSIIAEFCFSSSLVAEEASGGPETSPLSETDSPQPTDPVAVMEGSSTSETDKEKK
EQTTRDPDLINAIPQSAGLVRKKSGILLLTLVSFLILVLFIIVQLFIMKLRKAHVVWKKE
NEISEYTLESYRSRSNNEETSSQEKNGHTSRSKSCMSYFTHLYSEARTKRKEKHPQSSFR
REHVPLPESIV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggacgctttgcactctgctgctggcttggttccccttacaagaggccaccctg
gctcagcccgcggagaccctcagtgtggaggaaggccaacccctggagctgcactgcatg
gccccccacaacacttccctgcagtggctcgcgccctcgggcttcaccatcttcctcaac
gagcactctgccctacggagtcccaaataccagcttctccatcgctcccccggccagctg
tctgtcctcctgctgaacacgagccaggaagacgaaggcgtgtacagatgcctgcagtac
ggcagctccgtgagaaccaaggaagtgcgagtcgtcgtgctggcaacaccttcccagcca
gccgtggcagcatctgtggtcagcctgcaggacggacaagagcatgttgaggtcacatgc
tccacttcgagaagcaagcctcctccgaagatcacctggctcctgggggcgggcttagag
atctatggcgaaacccaccatgaattggacagtgatgggaagaaatggaacagcactagc
acgctccgagtccacactcacggccggaccgaggtggtgacttgcgttgtccgacaccca
ggtcttcaggaaaggaccctgctggcccctttcccgtttgaagatttggagcgtgggctg
ccgaaggcacgaaagctccaagcaggagcccagcccaccccacctcttctcctcagcaca
atgtggccgaaactgctctccatcattgccgaattttgcttttcctcttccctagtggct
gaagaggcatcgggtggcccggagacaagccccctctccgagacagactctccgcagccc
accgatcctgtggcagtaatggaaggttctagtacgtcagagactgacaaggagaagaaa
gaacagaccactcgggatccagacctcatcaatgccattcctcagtctgcggggctggtg
aggaagaaaagcggcatcctgctgctcacgctcgtctccttcctcatcctcgtgctcttc
atcatagtccagctcttcatcatgaagctccggaaagcgcatgtggtctggaagaaagaa
aatgaaatttcggaatacactttagaaagttacagatcaaggtcaaataatgaagaaaca
tcatctcaagagaaaaatggccatacttcccgctccaagagctgcatgagctacttcaca
catttatactcagaagcaagaacaaagaggaaagaaaagcatccacagtcaagcttccgg
cgggagcacgtccctctgccagaaagcatcgtgtag
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