Sorex fumeus (smoky shrew): 130024559
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Entry
130024559 CDS
T10594
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130024559 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130024559 (MYO5C)
04131 Membrane trafficking [BR:
sfum04131
]
130024559 (MYO5C)
03029 Mitochondrial biogenesis [BR:
sfum03029
]
130024559 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130024559 (MYO5C)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130024559 (MYO5C)
mRNA cycle factors
P-body specific factors
130024559 (MYO5C)
Membrane trafficking [BR:
sfum04131
]
Others
Actin-binding proteins
Myosins
130024559 (MYO5C)
Mitochondrial biogenesis [BR:
sfum03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
130024559 (MYO5C)
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
130024559 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
AAA_16
AAA_22
NPHP3_N
Myosin_N
Motif
Other DBs
NCBI-GeneID:
130024559
NCBI-ProteinID:
XP_055971251
LinkDB
All DBs
Position
Unknown
AA seq
1739 aa
AA seq
DB search
MAVAELYTQYNRVWIHDAEEVWKSAEIAKDYRAGDRVLRLRLEDGTELDYSVVPGALPPL
RNPDILVGENDLTALSYLHEPAVLHNLRVRFAESKLIYTYSGIILVALNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSMNTHVEEKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQPEFRHLKLGEAEEFNYTSMGGSTRIEGVDDR
ADMIETQKTFTLLGFQKDFQMDVFRILAAVLHLGNVQVTALSGERSSVCENDGHLQVFCE
LLGLERGSVARWLCHRKIVTASETVVKPMTRPQALNARDALAKKIYAHLFDFVVDRINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQSVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVKKNPLFEKPR
MSNTSFIIQHFADKVEYVCEGFLEKNRDTVYDTLVELLRASKFHLCASFFQEHPASSSPF
GPVITVKAAKQIVKPSKHFRSTVGSKFRSSLYLLMETLNATTPHYVRCIKPNDEKLPFEF
DSQRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMTKQDLALSDKKEVCKVVL
HRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRSDKLRQGCVLIQKHIRGWLQRKKFLRERE
AALTIQRYFRGQQTVRKAVTAEALKQAWAAIVIQKHCRGYLVRSLYQLIRVSVITIQAHT
RGLLARRRYRKLLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQCLQKKLEDQ
NRENHGLVEKLTSLATLRAGDMEKIQRLESELDRAAAQKHNYEEKGKKFRAALEEKLTKL
QRHNSELEIQKEQAQQLLQEKTEELKEKMDNLTKQLFEDVRKEEQQRMLLEKSFELKSQD
YETQLQSFREEISALKAEKMHLQHQLEEEHVTAASLRGDVARLSKQAKTVSEFEKEIELL
QAQKIDVEKHVQNQKREMREKMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDGELWFAY
EGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHEV
TRLTSENMMIPDFKQQISELEKQKQDLEIRLNKQNEKAKGKLEELRHQLSHSKEEEGALR
KTTEAPCESQTGEKEKLVRKSQEAQEASQHLDCETEREVEKGFRQEASHLTVENRDLEEE
LDMKDRVIKKLQDQVKTLTKTIEKANNVYLPSECKEYLGMLEYRREDEAKLIQNLILDLK
PRGVVVNMIPGLPAHILFMCVRYVDSVNDDNMLKSLMNSIINGIKQVVKDHLEDFEMLSF
WLSNSCHFLNCLKQYSGEEEFMKYNTPHQNKNCLNNFDLSEYRQVLSDVSIRIYHQFIMV
MENSIQPIIVPGMLEYESLQGISGRKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYSTMC
QSGLDPELVRQAVKQLLYLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKEKNLH
NGLAKETLEPLSQAAWLLQVKKTTDSDAVEISERCTALTAVQIVKILNLYTPIDDFEKRV
APAFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLNRL
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtctggattcatgatgctgaggag
gtttggaagtctgccgagatagcaaaggactacagggccggggaccgcgtgctgagactc
cggctggaggatggaacggagctggattactccgttgttccaggcgctctgcctcctctc
cggaatcccgacatcctcgtgggtgagaacgacctcacggccctcagctacctccatgag
cctgcagtgctgcacaatctcagagtccgctttgcagaatccaaactcatctatacctac
agcggaatcatcttggtggctctgaacccatacaagcagctgccgatctatggagacgcc
atcatccatgcttacagcgggcagaacatgggcgacatggacccccacatattcgccgtg
gccgaggaggcctacaagcagatggccaggaataacaagaaccagtcaataattgtgagc
ggggagtcgggtgctggaaaaaccgtgtccgcacgctacgccatgaggtactttgccacg
gtcagcaagtcaagcatgaacactcatgtggaggagaaggtcctggcatccaaccccatc
actgaggcggtgggcaatgccaagaccacccgcaatgacaacagcagtcggtttggaaaa
tacacggagatcagtttcgacgagaggaaccagatcatcggagccaacatgagaacctac
ctcctggagaagtccagagttgtcttccaatcggagaatgagcggaattaccacatcttc
tatcagctttgcgcatctgctcagcagccagagttcaggcaccttaaattaggtgaagca
gaagagtttaattacacgagcatggggggcagcactcggatcgagggcgtggatgacagg
gctgacatgatcgagacgcagaagaccttcacgctgttgggcttccagaaggatttccag
atggatgtgttccggatcctggcggccgtcctccacctggggaacgtgcaggtcacggcg
ctgagcggcgagaggtcgtctgtttgtgagaacgatggccacctgcaggttttctgtgag
ctcctcggcctggagagaggcagtgtggctcggtggttatgccaccgcaaaattgttacg
gcctctgagacggtggtgaagcccatgaccaggccccaggccctgaatgccagggacgca
ctggccaagaagatctatgctcacctctttgacttcgtcgtggacaggattaaccaggcc
ttgcagttctcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgtgaatagctttgagcagttttgcatcaattatgctaatgaaaaactgcag
cagcagttcaacctgcatgtctttaaactcgagcaagaggaatacatgaaggaagacatc
ccttggactctgattgatttctatgacaaccagtctgtcattgacctgattgaagcgaaa
atgggcattttggagttgctggatgaagaatgtttgctgccacacggaacagatgagaac
tggcttcaaaagctgtataataattttgtcaagaagaaccctttgtttgagaagcccaga
atgtcaaacacatcgttcatcatccagcacttcgctgacaaggtagaatacgtatgtgag
ggcttccttgagaagaacagagatactgtctacgacacgctggttgagctcctgagagca
agcaagttccacctctgtgccagcttcttccaggaacatccagcctcttcttcccccttc
ggaccagtgatcacagtcaaggctgccaagcaaatcgtcaagcccagtaagcacttccgg
agcaccgtggggagcaagttccgcagctccctgtacttactcatggagaccctcaacgcc
accacccctcactacgtccgctgcatcaagccaaacgatgagaaattaccctttgagttc
gactcccagaggattgtccagcagctgcgggcgtgtggtgtcttggagactatccgcatc
agtgctcagagttacccttccaggtggacctacattgagttctacagtcgctacagcatc
ctcatgaccaagcaggacctcgcgctcagcgacaagaaggaggtgtgcaaggtggtctta
cacaggctcatccaggattctaaccagtaccagtttgggaagaccaagatcttcttccga
gcggggcaggtggcttacttagagaagctccgctcggataagctgaggcagggctgcgtc
ttgatccagaagcacattcggggctggctccagaggaagaagttcctccgggagcgggag
gctgccttgaccatccagcgctacttccggggccagcagactgtgaggaaagcagtgacc
gcagaggccctgaagcaggcgtgggcggccatcgtcatccagaagcactgtcgcggctac
ctggtccgcagcctgtaccagctgatccgggtgtccgtgatcaccatccaggcccacacg
cgtgggctcctggccagaaggaggtaccggaagctgctggaggagcacaaggctgtgatc
ctgcagaagtacgccagggcatggctggcacgccgaaggttccagagcatccggcggttt
gtgctcaacattcagctcacctacagagtccagtgtctgcagaaaaagttagaagatcag
aacagagagaaccacggactggtggagaagctgaccagcctggccacgctccgggctggg
gacatggagaagatccagaggctggaatccgaacttgacagagccgctgcccaaaagcac
aattacgaggagaaggggaagaagttcagggccgccctggaggagaaattgaccaaactg
cagaggcacaattcagaactggaaattcaaaaggagcaggcgcagcagctgcttcaggag
aaaacggaagagttgaaagaaaagatggacaacctcaccaagcagctctttgaagacgtg
cgaaaggaagaacagcagcgcatgctgctggaaaaaagttttgagctgaaatcacaagac
tacgagacccagctgcagtcgttcagagaagaaatcagcgctctaaaggctgagaaaatg
catctgcagcatcagctggaggaagagcacgtcacggcagccagcctgaggggggacgtg
gcacggctgagcaagcaggcgaagacagtctctgagtttgaaaaggagatagagctgctt
caggcacagaagatagatgtggagaaacacgtgcaaaaccaaaagcgagaaatgcgagaa
aagatgtcagaagtcacaaagcagcttcttgagagctatgatattgaagacgtcagaagc
aggctctctgtggaagatttggaacatttaaatgaggacggagaactttggtttgcttat
gaaggactgaagaaagcaacgcgtgtcctagagagccacttccagtcccagaaggactgc
tatgaaaaggagattgaagcgctgaactttaaagtggtgcatctgagtcaagaaataaac
cacctccagaaattattcagagaagagaatgacatcaacgaaagtatccgtcatgaagtg
accagactaacgtcagaaaatatgatgatcccggactttaagcagcaaatttcagaactg
gagaaacaaaagcaagatcttgagattcgcctgaacaaacaaaatgaaaaggcaaaaggt
aaactggaagaattacgccatcagctgagtcacagtaaagaagaggaaggagcactgaga
aagaccacagaagccccgtgtgaatcccagacaggagagaaagaaaaactggtgaggaag
agccaagaagcgcaagaggctagccagcacttagactgcgagacagagagagaagtggag
aagggtttccggcaggaagcctctcatctcactgtggaaaacagggatcttgaagaagag
ttagatatgaaggatagagtgattaaaaagctacaagatcaagtcaagactctaaccaag
acaattgaaaaagccaataacgtgtatttgccgtcagaatgcaaggagtacctgggaatg
ctggaatacaggagagaagatgaggccaaactcattcagaatctcatcctcgacctcaag
ccccgcggcgtggtggtgaacatgatccccgggctgccggctcacatcctcttcatgtgt
gtgcgctacgtggactccgtgaacgacgacaacatgctcaagtcgctgatgaacagcatc
attaatggcatcaagcaggtggttaaggaccatttggaagacttcgagatgctgtccttt
tggctctccaattcttgtcatttcctcaactgcctgaaacagtacagtggagaggaggaa
ttcatgaagtataatactccccatcagaataagaattgcttgaacaattttgacctttca
gaatacagacaagttcttagtgacgtgtctatacgaatatatcatcagttcattatggta
atggaaaacagtattcaaccaataatagtgcctggcatgctggagtatgaaagcctgcag
gggatttctggccggaagcccacgggcttccggaaacggtcctccagcatcgacgacacg
gatgcctacaccatgacgtccatcctgcagcagctgagctacttctacagcaccatgtgc
cagagcggcctggaccccgagctcgtgcggcaggcagtgaagcagctcctgtacctcatc
ggggcagtcaccctcaacagcctcttcctgcgcaaagacatgtgctcgtgcagaaagggc
atgcagatacggtgcaacatcagctacttagaagaatggctcaaagaaaagaatctgcac
aatggcttggccaaagaaacactggaaccgctctcccaggccgcctggttgctgcaggtc
aagaagaccacggacagcgatgccgtggagatctccgagcgctgcactgcgctgacggcc
gtgcagatcgtgaagatccttaatctctacacgcccatcgatgactttgagaagagagtg
gccccagccttcgtccgtaaagtccaggctctccttaacagccgggaggattcctcacag
ctgatgttggataccaagtaccttttccaagtcacttttccgttcaccccctctccacac
gcactggaaatgatccagattcctagcagttttaagctgggcttcctcaacagattataa
DBGET
integrated database retrieval system
