Sorex fumeus (smoky shrew): 130024586
Help
Entry
130024586 CDS
T10594
Symbol
COL23A1
Name
(RefSeq) collagen alpha-1(XXIII) chain
KO
K24355
collagen type XXIII alpha
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04974
Protein digestion and absorption
Brite
Glycosaminoglycan binding proteins [BR:
sfum00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130024586 (COL23A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
130024586
NCBI-ProteinID:
XP_055971273
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MSPGAARAVALPGAPGVPGAGGVGGRPAWALGALCLLLSSAAAAACLRLGVQAAALQQRV
AALEQELQLLPHLEQLVREKLDGLVKLRKIREAPTECVCPPGPPGRRGKPGRRGDAGPPG
PAGRDGYPGPLGLDGKPGLPGPKGEKGAPGDFGPRGDQGHDGAAGPPGPPGPPGVQGPPG
DTGKDGPRGAQGPTVREGEQGETDGAIGPVGPPGPRGEPSVSGKKGDDGSPSQPGPPGPP
GPKVGTWSVRPGSGLQPPSPQGEPGQRGADGAVGSRGFPGLKGEQGDTVVIDYDGRILDA
LRGLPGPQGPPGPPGHPGPKGELGLPGAPGADGEKGPKGAKGDPGETAPAGPKGDAGEMG
LPGLPGPAGLKGQKGEPAAAAESLAQVIMEPGPPGPPGPPGPVGLQGVPGPKGLDGAKGE
KGASGDRGPSGPPGPAGPPGLIGLPGTKGEKGRAGEPGLDGFPGPRGEKGEQSDRGEKGE
RGVPGRKGVKGQKGEPGPPGLDQPCPVGPDGLPVPGCWHKRPQAVVNARVGGTLDDCGQG
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagccccggcgcggcgcgggccgttgcgctgcccggagcccccggagtgccaggcgcg
gggggcgtcggggggcggccggcctgggcgctgggcgcgctgtgcttgctgctgtcgtcg
gcggcggccgccgcgtgcctgcgactgggcgtccaggcggccgcgctgcagcagcgggtg
gcggcgctcgagcaggagctgcagctgctgccgcacctggagcagctggtgcgcgagaag
ctggacggattggtcaagctccggaagattcgagaagctccgaccgagtgtgtctgcccc
cccggtccccctggacggcgcggtaagcccggaagaagaggcgacgccggcccgcctggc
cccgcgggacgagacggctacccggggccgctgggtctggacgggaaacctggactgcca
ggccccaagggtgaaaagggtgcaccaggagacttcggcccccggggagaccaggggcat
gatggagctgctgggcctccaggaccccctggccctcccggggtacagggtccacctgga
gacactgggaaggatggaccccggggggcacagggccctacggtaagagagggagagcaa
ggtgaaactgatggcgccataggcccagtaggacccccggggcccaggggtgagcccagt
gtctcgggaaaaaagggagatgacgggtccccgagccagcctgggcctcctggaccccca
gggcccaaggtaggtacctggtccgtcagaccaggctccgggctgcagcctccctctcca
cagggcgagccgggccagcgaggggccgacggagccgtgggatcacggggcttcccaggc
ctgaagggcgagcagggggacacggtggtgatcgactacgacggcaggatcctggacgca
ctgaggggacttcctggaccacaggggcccccggggccaccaggacaccccgggcccaag
ggcgaacttgggctacccggagccccgggagctgacggggagaagggccccaaaggcgct
aaaggagaccctggagagacggcgccagcagggcccaaaggggacgcgggagagatgggg
ctgccaggcctcccggggcctgctgggctcaaggggcagaaaggagagccagcggcggcc
gcagagagcttggcccaggtcatcatggagccgggcccccccgggcccccaggtcccccg
ggccctgtgggcctacagggagttccaggtcccaagggccttgatggagccaaaggagag
aagggtgcatcaggggacaggggtcccagcgggccgcccgggccagcgggtccaccaggc
ctcatcgggctgccaggaaccaaaggagagaagggcagagccggggagccagggctggat
ggtttccccggaccccgtggcgagaagggagaacaaagcgaccggggagagaagggtgaa
cgaggagtccccgggaggaagggggtcaaaggtcagaaaggggagccggggccacccggc
ctggaccagccctgccctgtgggccccgatgggctgccggtgcccggatgctggcacaag
aggccgcaggcggtggtcaacgcgcgggtgggcggaaccttagacgactgtgggcagggc
ccctaa
DBGET
integrated database retrieval system