Sorex fumeus (smoky shrew): 130024595
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Entry
130024595 CDS
T10594
Name
(RefSeq) LOW QUALITY PROTEIN: CAP-Gly domain-containing linker protein 1-like
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
130024595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfum03036
]
130024595
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfum04812
]
130024595
Chromosome and associated proteins [BR:
sfum03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
130024595
Cytoskeleton proteins [BR:
sfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
130024595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAP_GLY
DUF1512_C
NCAB2
Motif
Other DBs
NCBI-GeneID:
130024595
NCBI-ProteinID:
XP_055971279
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MSLLRPSGLKSPTKILKHGSWALKAPSAAAAPVEKTMPGEKTPIAPSSEMQEEFVGDFQV
GERVWVNGNKPGFIQFLGETQFAPGQWAGIVLNEPIGKNDGSVADVRYFQCEPLKGIFTR
PSKLSRSFQADDETNCRQPAPAAWATPPLSASPAPAGTAKVPQSPAKESPATPHISSLTR
TARESISNLSETGSLKKGERERKLGDQVLVGGMEAGVVRFLGETDFAKGDWCGVELDKPL
GKNDGAVAGTRYFQCQPKYGLFAPIHKVTKIGFPSTTPAKGKVAAVRRVMATTPASLKRS
PSASSLSSVSSGASSVSSRPGRTGLLPETSSRYAHKISGTTALQEALKEKQQHIEKLLAE
RDLERAEVAKATSHMGEIEQELALXRNGHDQHVLELETKNDELRAMLEATDWEKVELLNQ
LEEEKRKVEDLQFRVEEESITKGDLQKEVKSLQAASEKLAKENECLRTKLDHANKENADV
IALRKSKLETAIAPHQQVMGEPKASVSQGVGAEAAELAELKMQIERLQFEYQQEVESLKA
QQAAERAAHASELQTLRSRLFRTAQEQKNSLEAARAKLEQIEDQHLVEMEDALNKLQEAE
TKVKHLDGLRAVCSQQAQALANATAQLEATQQKLLQLDGLWKASSEGQLGMEKLRQQLQV
AERQEEKVDVSRSQCQALQAEHTKASVESQGQYEEAPQALQKLLQQAEEKLQAAEAENGS
LLRQVAELKSQADKAKELLGQKATKLQRQLHWLLKDQALLEAQHTELLAEREFGARVVSL
PRCAHPLLAVCGIAVWSACGPFAVVGPPPAGRLWYRSMEHAFKECYLDSDQRSLYHAAKG
LMTLQGCAVPSPRSSARVSAPGIEEFVHILPGPHFEERHPLPRCLQKKRRFVSDFAFVTR
LSP
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctgaggcccagcgggctgaagtcccccaccaagatcctcaagcatgggagc
tgggccctgaaggcaccctcggccgctgctgctcccgttgagaagaccatgcctggggag
aaaacccccatcgccccctcctcggagatgcaggaggagtttgtgggcgacttccaggtc
ggggaacgagtctgggtgaacgggaacaagcctggattcatccagttcctcggggagacc
cagtttgcccctggtcagtgggccgggattgtcttgaacgagcccatcggcaagaacgac
ggctcggtggcggatgtgcgctacttccagtgcgagccgctgaagggcatcttcacccgg
ccgtccaagctgagtaggagcttccaggccgatgatgagaccaactgccggcagccagcg
cctgccgcctgggccacaccgcccctgtcggcctccccggcccctgccggcaccgcgaag
gtgccccagtcccccgcgaaggagtcaccggccacccctcacatcagcagcctgaccagg
acggccagagagtccatctccaacctctctgagaccggctccctcaagaaaggggagcgg
gagaggaagctcggggaccaggtgctggtgggaggcatggaggccggtgtggtgcgcttc
ctcggggagacggacttcgccaagggggattggtgcggcgtagagctggacaagccactg
ggcaagaacgatggtgccgtggccggaacgaggtacttccagtgtcagcccaagtatggc
ttgtttgctcccattcacaaagtcaccaagatcggcttcccgtccacgacgccggccaag
ggcaaggtggccgctgtgaggcgtgtgatggccaccacccccgccagcctgaagcgcagc
ccttcggcctcctcgctcagctccgtcagctccggggcctcatccgtgagcagcaggccc
ggccgcacaggactattgccggaaacctcctcccgctacgcccacaagatctctggcacc
accgccctccaggaggcgctgaaggagaagcagcagcacattgagaagctgctggccgag
cgggacctagagcgggcggaggtggccaaggccacgagccacatgggggagatagagcag
gagctggccctgngccggaacgggcacgaccagcacgtcctggagctggagaccaagaac
gacgagctgcgggccatgctggaagcgaccgactgggagaaggtggagctgctgaaccag
ctggaggaggagaagaggaaagtggaagacctccagttccgagtcgaggaggagtccatc
accaaaggcgacctgcagaaggaggtgaagtccctgcaggcggcctccgagaagctcgcc
aaggagaacgagtgcctgaggaccaagctggaccatgccaacaaggagaatgcggacgtg
atcgccctgaggaagtccaagctggagacggccatcgccccgcaccaacaggtcatgggc
gagccgaaggcatccgtgagccagggcgtgggcgccgaggcggccgagctggccgagctc
aagatgcagatcgagaggctacagttcgagtaccagcaggaggtggagagcctgaaggcc
cagcaggcggctgagcgtgcagcgcacgcctccgagctgcagacgctcaggtcgcggctg
ttcaggacagcccaggagcagaagaacagcctggaggccgcacgggccaagctcgagcag
atcgaggaccagcacctggtggagatggaggacgccctgaacaagctgcaggaggcggag
acgaaggtaaagcacctggacgggttgcgggccgtgtgtagtcagcaagcccaggccctg
gccaatgccacggcacagctggaggccacccagcagaagctcttgcagctcgatgggctc
tggaaggccagttccgaaggtcaattgggaatggagaagctcaggcagcagctccaggtg
gctgagcggcaggaggagaaggtggacgtgagccgcagccagtgccaggctctgcaggcc
gagcacaccaaggccagcgtggagagccaggggcagtacgaggaggcgccgcaggccctg
cagaagctgctgcagcaggcggaggagaagctgcaggcagcggaggcggagaacgggagc
ctgctgcgacaggtggccgagctgaagtcgcaagccgataaggccaaggagctgctgggc
cagaaggccactaagctccagcggcagctgcactggctgctgaaagaccaggcgctgctg
gaggcacagcacaccgagctgctggccgagcgggagttcggagcccgtgtggtctctttg
ccgcggtgcgcccaccctctgctggccgtctgcggtattgcagtctggagcgcgtgtggc
ccctttgccgtggtgggcccgccccctgctggccgtctgtggtatcgcagtatggagcat
gcgttcaaggagtgctacctggacagcgaccagaggagcctgtaccacgcggccaagggc
ctgatgacgctgcagggctgtgcggtaccatcccctagatcttctgcaagggtgagtgcg
ccaggaatcgaagaatttgtgcacatactcccgggcccccacttcgaggagcggcacccg
ctgcccaggtgcctgcagaagaaacgtaggtttgtgagtgattttgctttcgtgacccgc
ctttcaccttga
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