Sorex fumeus (smoky shrew): 130024693 Help Entry 130024693         CDS       T10594                                  Symbol DCTN1 Name (RefSeq) dynactin subunit 1 isoform X1   KO K04648   dynactin 1 Organism sfum  Sorex fumeus (smoky shrew) Pathway sfum04814   Motor proteins sfum04962   Vasopressin-regulated water reabsorption sfum05014   Amyotrophic lateral sclerosis sfum05016   Huntington disease sfum05022   Pathways of neurodegeneration - multiple diseases sfum05132   Salmonella infection Brite KEGG Orthology (KO) [BR:sfum00001]  09140 Cellular Processes   09142 Cell motility    04814 Motor proteins     130024693 (DCTN1)  09150 Organismal Systems   09155 Excretory system    04962 Vasopressin-regulated water reabsorption     130024693 (DCTN1)  09160 Human Diseases   09171 Infectious disease: bacterial    05132 Salmonella infection     130024693 (DCTN1)   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     130024693 (DCTN1)    05016 Huntington disease     130024693 (DCTN1)    05022 Pathways of neurodegeneration - multiple diseases     130024693 (DCTN1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfum04131]     130024693 (DCTN1)    03036 Chromosome and associated proteins [BR:sfum03036]     130024693 (DCTN1)   09183 Protein families: signaling and cellular processes    04812 Cytoskeleton proteins [BR:sfum04812]     130024693 (DCTN1) Membrane trafficking [BR:sfum04131]  Endosome - Golgi transport   Rab GTPases and associated proteins    Rab associated proteins     130024693 (DCTN1) Chromosome and associated proteins [BR:sfum03036]  Eukaryotic type   Centrosome formation proteins    Microtubules and associated factors     Dynactin complex      130024693 (DCTN1) Cytoskeleton proteins [BR:sfum04812]  Eukaryotic cytoskeleton proteins   Microtubules    Tubulin-binding proteins     Dynactins      130024693 (DCTN1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Dynactin CAP_GLY TMF_DNA_bd TSC22 Motif Other DBs NCBI-GeneID:  130024693 NCBI-ProteinID:  XP_055971365 LinkDB All DBs Position Unknown AA seq 1256 aa AA seqDB search MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE GTDAAAKTSKLSTRPASTGVPGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPA LTSPGAAPPLLSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQE WKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAES LQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDL SSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELTQAETTIDELKEQVDAALGAEEMV ETLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQ KRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFA ETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAE LIRKQAQEKFELSENCLERPGLRGAAGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVD VYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLAEQPE DSTMQLADHIKFTQSALDCMSVEVGRLRAFLQSGQEASDIALLLRDLETSCSDIRQFCKK IRRRMPGTDAPGIPAALAFGQQVSDTLLDGRKHLTWVVAVLQEVAAAAAQLIAPLAENEG LPVATLEELAFKANEQIYGTPSSSPYECLRQSCTILISTMNKLATAMQEGEYDAERPPSK PPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKL DSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLSSQ SKRAAEGLRGPAPSGIATLVSGLAGGGAPGQAAGAVAGPGLVKDSPLLLQQISALRLHIS QLQHENSVLRGAQMKASLAALPPLHVAKLPLPPREGPDSELAAGALYRKTSQLLETLNQL STHTHVVDITRTCPAAKSPSAQLLEQVAQLATLSDTIEKLRDEVLKETVSQRPGAAVPTD FATFPSSAFLRAKEEQQDDTVYVGKVTFACAAGLGQRHRVVLTQEQLHQLHGRLIS NT seq 3771 nt NT seq  +upstreamnt  +downstreamnt atggcccagagcaagcggcacgtgtacagccggactcccagcggcagcagaatgagtgcg gaggcaagtgcccggcctctccgggtgggctcccgcgtggaggtgatcgggaaaggccac cgaggcaccgtagcctacgtgggcgccaccctctttgccactggcaagtgggtcggtgtg atcctggatgaagccaagggcaagaacgatggcaccgtccaaggcaggaagtacttcaca tgcgatgaagggcatgggatctttgtacgacagtcccagatccaggtctttgaagatgga gcagatactacttccccagagacaccggattcttctgcctccaaggtcctcaaaagagag ggaactgatgcggctgcaaagaccagcaaactgtccacccggccggccagtaccggggtg cctggggccagtagctccctgggaccctccggctccgcgtcagcaggagaactgagcagc agcgagcccagcaccccggcacagacgccgctcgcagcgcccatcatccccacgccggcc ctcacgtcccctggggcagcccccccactcctttccccctccaaggaggaggaggggctg agggctcaggtgcgagacctggaggagaagctggagacgctgcggctgaaacgggcggaa gacaaggcgaagctgaaggagctggagaagcacaagatccagctggagcaggtgcaggaa tggaagagcaagatgcaggagcagcaggccgacctgcagcggcgcctcaaggaggcgcgg aaggaggccaaggaggcgctggaggccaaggagcgctacatggaggagatggccgacacg gccgacgccatcgagatggccacgctggacaaggagatggctgaggagcgggctgagtcc ctgcagcaggaggtggaggcgctgaaggagcgtgtggacgagctcaccacggacctggag atcctcaaggccgagattgaggagaagggctctgacggggctgcgtccagctatcagctc aagcagctggaggagcagaacgcccgcctcaaggatgccctcgtgaggatgcgggacctt tcttcctccgagaagcaggagcacgtgaaactccagaagctcatggaaaagaagaaccag gagctggaggtggtgaggcagcagcgggagcgcctgcaggaggaactgacccaggccgag accaccatcgacgagctcaaggagcaggtggacgctgctctgggtgctgaggagatggta gagacgcttacggaccggaacttgaatctggaagaaaaagttcgggagttgagagagact gtcggggacttggaggcgatgaacgagatgaacgatgagctgcaggagaacgcgcgggag acagagctggagctgcgggagcagctggacatggcgggcgcccgcgtacgcgaggcccag aagcgtgtggaggcggcccaggagactgtggcagattaccagcagaccatcaagaagtac cgccagctgaccgcccacctgcaggacgtgaaccgggagctgaccaaccagcaggaagcg tctgtcgagcgccagcagcagccgcctcctgagaccttcgacttcaagatcaagtttgct gagacaaaggcccacgctaaggccattgagatggagctgaggcagatggaggtggcccag gccaaccggcatatgtccttgctgaccgccttcatgccggacagcttcctgcggccaggc ggggatcacgactgcgtcctggtgcttctcctcatgccccgtctcatctgcaaggcagag ctcatccggaagcaggcccaggagaagtttgagctgagtgagaactgtctggagcggccg gggctgcgtggagcggcgggggagcagctcagcttcgcagcggggctggtgtactcgctg agcctgctgcaggccacactccaccgctacgagcatgctctctctcagtgcagcgtggat gtgtataagaaggtgggcagcctctaccccgagatgagcgcccacgagcgctccctggac ttcctcatcgagctgctgcacaaggaccagctggacgagacggtcaacgtggagcctctg accaaggccatcaagtactatcagcacctgtacagcatccacctggccgagcagcccgag gacagcacaatgcagctggccgaccacatcaagttcacccagagtgccctggactgcatg agcgtggaggtgggccggctgcgggccttcctgcagagtgggcaggaggcttcagatatc gcgctcttgctccgggacctagagacgtcctgcagtgacatccgccagttctgcaagaag atccgaaggcgcatgcccgggacggacgctcctgggattccggccgcactggcctttgga caacaggtgtccgacacgctgctcgatggccggaagcacctgacgtgggtggtggctgtg ctgcaggaggtggcggctgctgccgcccagctcattgccccacttgcagagaacgagggg ctgcccgtggccaccctggaggagctggccttcaaagcgaatgagcagatctacgggacg ccctccagcagtccctacgagtgtctgcgccagtcctgcaccatcctcatcagcaccatg aacaagctggccacagccatgcaggagggagagtacgacgcagagcggccccccagcaag cctcccccggtggagctgcgggccgcggccctgcgggcggagatcacggatgccgagggc ctgggcttgaagctggaggaccgagagaccgtgatcaaggagctcaagaagtccctcaag atcaagggggaggagctgagcgaggccaatgtacgcctcagcctgctggagaagaagctg gacagtgcggccaaggatgcggacgagcgcatcgagaaagtgcagacgcggctggaggag acgcaggcgctgctgcgcaagaaggagaaggagttcgaggagaccatggacgcgctccag gccgacatcgatcagctggaggccgagaaggccgagctgaagcagcggctgagcagccag tccaagcgcgcggccgaggggctccggggccctgcgccctctggcatcgccaccctggtc tcgggcctggcgggcggaggtgctcccggacaggctgcgggcgcggtggcgggcccggga ctggtgaaggactcaccgctgctgctgcagcagatctcggcgctgaggctgcacatctcg cagctgcagcatgagaacagcgtcctcaggggagcccagatgaaggcgtcgctggcggcg ctgccccctctacacgtggccaagctgccgctgccaccgcgggagggccctgacagcgag ctggcggccggagcgctgtaccgcaagaccagccagctcctggagacgctgaaccagctg agcacgcacacgcacgtcgtggacatcacccgcacctgcccggccgccaagagcccgtcg gcccagctcctggagcaggtggctcagctcgcgaccctcagcgacaccatcgagaagctc agggacgaggtcctcaaggagactgtatctcagcgtccgggcgctgccgtccccacggac tttgccactttcccttcctcagccttcctcagggccaaggaggagcagcaggatgacacg gtctacgtgggcaaagtgaccttcgcgtgcgcggctggcctgggccagcgacatcgggtg gtgctgacgcaggagcagctgcaccagcttcacggccgcctcatctcctga

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