Sorex fumeus (smoky shrew): 130024744
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Entry
130024744 CDS
T10594
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03013
Nucleocytoplasmic transport
sfum03015
mRNA surveillance pathway
sfum03040
Spliceosome
sfum05014
Amyotrophic lateral sclerosis
sfum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130024744 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
130024744 (ALYREF)
03015 mRNA surveillance pathway
130024744 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130024744 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
130024744 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sfum03019
]
130024744 (ALYREF)
03041 Spliceosome [BR:
sfum03041
]
130024744 (ALYREF)
Messenger RNA biogenesis [BR:
sfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130024744 (ALYREF)
TREX complex
130024744 (ALYREF)
Spliceosome [BR:
sfum03041
]
Complex C
Other components
EJC/TREX
130024744 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130024744 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
130024744
NCBI-ProteinID:
XP_055971442
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGRGGGVQAAARVGRGGGPVRNRAAL
ARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDAD
IQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLV
TSQIDTQRRPAQSINRGGMTRNRGAGGFGGGVRRGARGGSRGRGRGTGRSSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtctctggacgacatcatcaagctgaaccggagccagcgg
ggcggccgcggcgggggccggggccgcggccgcgccggctcgcagggccgcggcggcggc
gtgcaggcagccgcgcgggtgggccgcggcggcgggccggtccggaaccgggcggctctg
gcccgcggcgcggcgggcggcggcggcaggaatcggccggcgccctacagccggcccaag
cagctccccgataagtggcagcacgacctgttcgacagcggcttcggggccggcgccggc
gtggagacaggcgggaagctgctggtgtctaacctggacttcggcgtgtcggacgctgac
atccaggagctgttcgccgagttcgggacactgaagaaggcggctgtgcactacgatcgc
tcgggccgcagcctgggcaccgccgacgtgcacttcgagcggaaggcggacgcgctgaag
gccatgaagcagtacaatggggtgcccctggacggccgccccatgaacatccagctcgtc
acgtcacagatagacacacagcggagacccgcccagagcataaatagaggcgggatgact
aggaaccgcggggctggaggcttcggtggcggggtccggagaggagcccgcgggggcagc
cggggccggggccggggcaccggccggagctccaagcagcagctttctgcagaggagctg
gacgcacagctggacgcctacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system