Sorex fumeus (smoky shrew): 130024767
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Entry
130024767 CDS
T10594
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum04150
mTOR signaling pathway
sfum04310
Wnt signaling pathway
sfum04519
Cadherin signaling
sfum04928
Parathyroid hormone synthesis, secretion and action
sfum05010
Alzheimer disease
sfum05022
Pathways of neurodegeneration - multiple diseases
sfum05200
Pathways in cancer
sfum05224
Breast cancer
sfum05225
Hepatocellular carcinoma
sfum05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130024767 (LRP6)
04150 mTOR signaling pathway
130024767 (LRP6)
09133 Signaling molecules and interaction
04519 Cadherin signaling
130024767 (LRP6)
09150 Organismal Systems
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
130024767 (LRP6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
130024767 (LRP6)
09162 Cancer: specific types
05225 Hepatocellular carcinoma
130024767 (LRP6)
05226 Gastric cancer
130024767 (LRP6)
05224 Breast cancer
130024767 (LRP6)
09164 Neurodegenerative disease
05010 Alzheimer disease
130024767 (LRP6)
05022 Pathways of neurodegeneration - multiple diseases
130024767 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130024767 (LRP6)
Membrane trafficking [BR:
sfum04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
130024767 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
LRP1-like_beta_prop
Vgb_lyase
SGL
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
130024767
NCBI-ProteinID:
XP_055971477
LinkDB
All DBs
Position
Unknown
AA seq
1613 aa
AA seq
DB search
MGAVLRSLLACSFCALLRAAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVF
GHGLIYWSDVSEEAIKRAEFNRTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE
VSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRYIIINTE
IYWPNGLTLDYEERKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDTLYWT
DWNTHSILACNKYTGEGLREIHSNIFSPMDIHAFSQQRQPNATNPCGNDNGGCSHLCLMS
PVKPFYQCACPTGVRLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIR
HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWT
DTGTDRIEVTRLNGTMRKILISEDLEEPRAIVLDPMIGYMYWTDWGEIPKIERAALDGSD
RVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTL
LGDYVYWTDWQRRSIERVHKRSAEREIIIDQLPDLMGLKATNVHRIFGSNPCAEENGGCS
HLCLYRPQGLRCACPIGFELISDMKTCIVPEAFLLFSRRADIRRISLETNNNNVAIPLTG
VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLY
WADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG
SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQ
YQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQAGWNECASSNGHC
SHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSAINRMVIDEQQSPDIILP
IHSLRNVRAIDYDPLDKQLYWIDSRQNVIRKAQEDGSQGFTVVVSSVPNQNLEIQPYDLS
IDIYSRYIYWTCEATNVINVTRLDGRSIGVVLKGEQDRPRAIVVNPEKGYMYFTNLQERS
PKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLE
DSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGRESRTKVQARIAQLSDIHAVKELNLQ
EYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCGEPPTCSPQQFTCFTGE
IDCIPVAWRCDGFTECEDHSDELNCPVCSESQFQCASGQCVDGALRCNGDANCQDKSDEK
NCEVLCLIDQFRCANGQCIGKHKKCDHNVDCSDKSDELDCYPTEEPAPQATNTVGSVIGV
IITILVSGTIYFICQRMLCPRMKGDGETMTNDYVVHGPASVPLGYVPHPSSLSGSLPGMS
RGKSMISSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPAILNPPPSPATERSHYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYAPSRRMTSVATAKGYTSDL
NYDSEPVPPPPTPRSQYLSAEENYESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgtgctgaggagcctgctggcctgcagtttctgcgcgctcctgcgagcggcc
cctttgttgctttatgcaaacagacgggatttgcgattggtggatgctacaaatggcaaa
gagaatgccaccattgtagtcggaggcctggaggatgctgcagcggtggactttgtgttt
ggccatgggttgatatactggagtgatgtcagcgaagaagccattaaacgagcagagttt
aatcgaactgagagtgtgcagaatgttgtggtttctggattactgtcccctgatggactg
gcatgtgattggcttggagaaaaattatattggacagattcagaaactaaccggattgaa
gtttctaatttagatggatctttacgaaaagttttattttggcaagagttggatcaaccc
agagctattgctttagatccttcaagtgggttcatgtactggacagactggggagaagtg
ccaaagatagaacgtgctggaatggatggttcaagtcgctacattataataaacactgaa
atttactggccaaatggattgactttggattatgaggaacggaaactttattgggcagat
gcaaaacttaatttcatccacaaatcaaatttggatggaacaaatcggcaggcagttgtt
aaaggttcccttccacatccttttgctttgacgttatttgaggacacattgtactggact
gactggaatacacactccattttggcttgcaacaagtacactggcgagggtctgcgtgaa
atccattctaacatcttctctcccatggatatacatgctttcagccagcagaggcagcca
aatgctacaaatccatgtggaaatgataatggtggttgttcccacttgtgtttgatgtct
ccagtcaagcctttctatcagtgtgcttgtccaacgggggtcagacttctagagaatgga
aaaacctgcaaagatggcgccactgaattactgcttttagcccgaaggacagacttgaga
cgcatttccttggatacaccagatttcacagacattgttctgcagttagaagacattcgt
catgccattgccatagattatgatcctgtagaaggctacatctactggactgacgatgaa
gtgagggccatacgccgctcattcatagatggatctggaagtcagtttgtggtcactgct
cagattgctcatccagacgggattgccgttgactgggtagcccgaaatctttattggaca
gacactggcactgatcgaatagaagtgacgagactcaatgggaccatgaggaagatcttg
atttcagaggacttagaggaaccccgagccattgtgttagatcctatgattgggtacatg
tattggactgactggggagaaatcccaaaaatcgagcgagcagctctggacggttctgac
cgagtagtgttggtaaacacttctcttggttggccaaatggattagccttggattatgat
gaaggcaaaatatactggggagatgccaaaacagacaaaattgaggtaatgaatactgat
ggcactgggagacgagtactagtggaagacaagattcctcacatatttggattcactctg
ttgggggactatgtgtactggactgactggcagagacggagtatcgaaagagtacacaaa
cgaagtgcagagagggaaatcatcatagatcagcttcctgacctcatgggcctcaaagcc
acaaatgttcatagaatctttggttcaaatccttgtgctgaggaaaatggggggtgtagc
catctttgcctctatagaccacagggcctgcgctgtgcttgccccattggctttgagctc
atcagcgacatgaagacctgcattgtcccagaggctttccttttgttttcacggagagca
gatatcagacgaatttctttggaaacaaacaataataacgttgccattcctctcactggt
gtcaaagaagcttctgctttggattttgatgtgacagacaaccgaatctactggactgac
atatccctcaagaccatcagcagagcctttatgaacggcagtgcactggagcacgtggta
gaatttggcttagattatccagaaggcatggcagtggattggcttggcaagaacttgtac
tgggcagacacaggaacgaatcgaattgaagtgtcaaagttggatgggcagcacagacaa
gttttggtgtggaaagatcttgatagtcccagagctcttgcattggatcctgctgaaggg
tttatgtattggactgaatggggtggaaaacctaagatagacagagctgctatggatgga
agtgaacgaaccacactagtcccaaacgtgggacgagcaaatggcctaactattgattat
gctaaaaggagactttattggacagacctagataccaacttaatagaatcttcaaatatg
cttggactcaaccgtgaagttatagcagatgacttgcctcatccttttggcttaactcag
taccaagattacatctactggacggattggagccgacgcagcattgagcgtgccaacaaa
accagtggccaaaaccgcaccatcattcagggccatttggattatgtgatggacatcctc
gtctttcactcctctcgacaggcaggatggaatgaatgtgcttccagcaatgggcactgc
tcccacctctgcttggctgtgccagtaggaggttttgtttgtggatgtcctgcccactac
tctcttaatgctgacaacaggacttgtagtgctccaaccaccttcttactcttcagtcag
aaaagtgccatcaaccgcatggtgattgatgaacagcaaagccctgacatcatccttcct
atccatagtcttcggaatgttcgggccattgactatgacccactggacaagcagctctat
tggattgactcacggcaaaatgtgattcgaaaagcacaagaagatggcagccagggcttt
accgtggttgtgagttcagttccaaatcagaacctagaaatccagccttacgatctcagc
attgatatttatagccgctacatttactggacttgtgaggctacgaatgtgattaatgta
acaagattagatgggagatcgattggagtggtgctcaaaggggaacaagacagacctcgg
gccattgtggtgaatcctgagaaagggtatatgtattttactaatcttcaggaaaggtca
cccaaaattgaacgagctgctttggatggaacagaacgtgaggtcctctttttcagtggt
ttaagtaaaccaattgctttagcccttgatagcagattgggcaagctcttttgggctgat
tcggaccttcgacgaattgaaagtagtgatctctcaggtgccaaccgtatagtattagag
gactccaatatcttgcagcctgtggggctgactgtgtttgaaaactggctgtactggatt
gataagcagcagcaaatgatcgaaaaaattgacatgacaggccgagagagcagaaccaaa
gtccaggctcgaattgctcagctgagtgacatccacgccgtgaaggagctcaaccttcag
gagtaccgacagcatccttgtgctcaggataatggtggctgctcacatatatgtcttgtg
aaaggtgatggtacaaccaggtgctcttgccccatgcatttagttctgctgcaagatgag
ttatcatgtggagaacccccaacgtgttctccacagcagtttacttgtttcacgggggaa
attgactgtattcctgtggcctggcggtgtgacgggttcactgaatgcgaggaccacagc
gatgagctcaattgtcctgtgtgctcagagtcccagttccagtgcgccagcgggcagtgt
gttgatggtgcccttcgatgcaacggagatgccaactgccaggataaatctgatgagaag
aactgtgaagtactttgtttaattgatcagttccgctgtgccaatggtcagtgcattgga
aaacacaagaaatgtgatcataatgtggattgcagtgacaaatcagatgagctagattgt
tatccaacagaggagccagcaccacaggcgaccaataccgttggttcagttattggagtg
attatcaccattttggtgtctggaaccatatactttatctgccagaggatgttgtgtcca
cgtatgaaaggagatggggaaaccatgactaatgactatgtagttcatggaccagcttct
gtgcccctgggctatgtgcctcacccaagttctttgtcaggctctctgccaggaatgtct
cgaggtaaatcaatgatcagctctctcagtatcatgggcggaagcagtgggcccccttat
gaccgtgctcatgtcacaggcgcatcttcaagtagttcatcaagcaccaaaggcacttac
ttcccagctattttgaaccctcctccatccccagccacagaacgatcccattacactatg
gaatttggttattcttcgaacagtccatctactcataggtcctacagctataggccatac
agttaccggcactttgcaccccccacgaccccctgcagcacggacgtctgtgacagtgac
tatgcgcccagcaggagaatgacttcagtggcaaccgccaaggggtacaccagtgacttg
aactatgactcggagcccgtgcccccgcctcccacaccccgcagccagtacttgtcagca
gaagagaactatgagagctgcccgccttccccgtacacagagaggagctactctcatcac
ctctacccaccgccgccctcgccctgcaccgactcctcctga
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integrated database retrieval system
