KEGG   Sorex fumeus (smoky shrew): 130024838
Entry
130024838         CDS       T10594                                 
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sfum  Sorex fumeus (smoky shrew)
Pathway
sfum03020  RNA polymerase
sfum03420  Nucleotide excision repair
sfum05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:sfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130024838 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130024838 (POLR2D)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    130024838 (POLR2D)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sfum03021]
    130024838 (POLR2D)
   03400 DNA repair and recombination proteins [BR:sfum03400]
    130024838 (POLR2D)
Transcription machinery [BR:sfum03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130024838 (POLR2D)
DNA repair and recombination proteins [BR:sfum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130024838 (POLR2D)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Maelstrom Tfb4
Other DBs
NCBI-GeneID: 130024838
NCBI-ProteinID: XP_055971617
LinkDB
Position
Unknown
AA seq 142 aa
MAAGGCDPRAADVEEDASQLIFPKEFETAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEESKALIPSLEG
RFEDEELQQILDDIQTKRSFQY
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggctggcggctgtgacccgcgggcggccgacgtcgaggaggacgcttcccagctc
atctttcccaaagaatttgaaacagccgagactctcctgaattccgaagtgcacatgctt
ttggagcatcggaagcagcagaacgagagcgccgaggatgagcaggagctgtccgaggtc
ttcatgaagacactgaactacacggcccgctttagtcgcttcaaaaacagagagaccatt
gccagtgttcggagtttattactacagaaaaaactacataaatttgagctggcgtgtctg
gccaacctttgccccgagaccgcagaggagtccaaggctctgatcccaagcctcgagggc
cggtttgaagatgaggaactccagcagattcttgatgatatccagacgaaacgcagcttc
cagtattaa

DBGET integrated database retrieval system