Sorex fumeus (smoky shrew): 130024929
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Entry
130024929 CDS
T10594
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
sfum Sorex fumeus (smoky shrew)
Pathway
sfum03250
Viral life cycle - HIV-1
sfum04144
Endocytosis
sfum04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
130024929 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130024929 (HGS)
04145 Phagocytosis
130024929 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130024929 (HGS)
Membrane trafficking [BR:
sfum04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
130024929 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
FYVE_2
SUV2_M
FYVE_CARP1-2
UIM
Motif
Other DBs
NCBI-GeneID:
130024929
NCBI-ProteinID:
XP_055971735
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MGRGSGTFERLLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSAIKKKVNDKNPHV
ALYALEVMESVVKNCGQTVHDEVASKQTMEELKELLKRQVEVSVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNRKAEGKSTSTSELPPEYLTS
PLSQQSQLPPKRDETALQEEEELQLALALSQSEAEEKERMRQKSTYAAYPKAEPAPQAGS
LYSSPVNSSAPLAEDVEPELARYLNRNYWEKKQEEARRSPTPSAPAPLSESAPLPVDGHG
VPGPVLETALLDPDSQPAPSPGGPFSECQNGESEENHAQFLKALQNAVTTFVNRMKSNHV
RGRSVINDSAVLSLFQSINGMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALSALR
EEHREKLRRAAEEAERQRQIQLAHKLEIMRQKKQEYLEVQRQLAIQRLQEQEKERQLRLE
QQKQTVQMRAQMPAFSLPYAQLQALPPAGSVLYQPSGPTSFPGTFSPASSVEGSPMHTVY
MSQPAPAGSSPYASMPSSGADPNLVGAYMYPAGTTAPAAPPGPAGPAASPAYSSYQPTPS
QGYQTTASQAPQSLPALAQPQQPGALGYVGYAPYGVPVAGAPPGPAPQSLLPALPGPDSA
LAAPQPAYVQGQQPLYQQVPPSAGPPPPGAPQPPAQAPPPGSEAQLISFD
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcagcggcaccttcgagcgtctgctagacaaagccaccagccagcttctg
ctggagacagactgggaatccatcctgcagatctgtgacctcatccgccagggggacacg
caagccaagtacgcagtgagcgccatcaagaagaaggtcaatgacaagaatccgcatgtg
gccttgtatgctctggaggtcatggagtcagtggtgaagaactgcgggcagacagtgcac
gatgaggtggccagcaagcagacgatggaggagctgaaggagcttctgaagaggcaggtg
gaggtgagcgtccggaacaagatcctgtacctgatccaggcctgggctcacgccttccgc
aacgaacccaagtacaaggtggtccaggatacctaccagatcatgaaggtcgagggccac
gttttccccgagttcaaggagagcgacgccatgtttgctgcagagagggcccctgattgg
gtggatgctgaagagtgccaccggtgccgggtacagtttggcgtggtgacgcgcaagcac
cactgccgggcctgtggccagattttctgcggcaagtgctcctccaagtactccaccatc
cccaaatttggcatcgagaaggaggtgcgggtgtgtgagccctgctacgagcagctcaac
aggaaagcggaggggaagagcacgtccacctcggagctgcccccggagtacctgaccagc
cctctgtcccagcagtctcagctgccccccaagcgggacgagacagccctgcaagaggaa
gaggagctgcagctggccctggccctgtcacagtcggaggcggaggagaaggagaggatg
agacagaagtccacctatgctgcgtaccctaaagcggagccggcgccccaggctggcagc
ctgtactcgtcccccgtgaactcatcggctcctctggctgaagacgtcgagcccgagctc
gcccggtacctcaaccgcaactactgggagaagaagcaggaggaggctcgcaggagcccc
accccatcggcacctgcacccctgagcgagtcggcgcccctgcccgtggatggccacggc
gttcctggcccggtgctggagacggccctcctggaccccgactcacagccggcaccttct
cctggaggccccttcagcgagtgccagaacggggagtcagaggagaaccacgcgcagttc
ctgaaggcgctgcagaacgccgtcaccaccttcgtcaaccgcatgaagagtaaccatgtg
cgcggccgcagcgtcatcaacgactcagccgtgctgtccctgttccagtccatcaacggc
atgcacccgcagctgctggagctgctcaaccagctggacgagcgcaggctctactatgag
ggcctgcaggacaagctggcgcagatccgcgacgcccggggcgccctgagcgccctgcgg
gaggagcaccgggagaagctgcgccgggcagctgaggaggccgagcgccagcgtcagatc
cagctggcacacaagctggaaatcatgcggcagaagaagcaggagtacctggaggtgcag
cggcagctggccatccagcggctgcaggagcaggagaaggagcggcagctgcgcctggaa
cagcagaaacagacagtccagatgcgcgcccagatgccagccttctcactgccctatgcc
cagctccaagctctacctccagcaggcagcgtgctctaccagccctcgggccccaccagc
ttcccgggcaccttcagcccagccagctcggtggagggctccccaatgcacacggtgtac
atgagccagcctgcgcccgcaggcagcagcccctatgctagcatgcccagctctggagca
gatccgaacctagtgggcgcctacatgtacccggctggcaccaccgcccccgccgcgccc
ccgggccctgcggggccggctgccagcccggcctactcgtcctaccagcccaccccgtcg
cagggctaccagaccacagcctcgcaggccccgcagagcctcccggcgctggcgcagccc
cagcaaccgggcgccctgggctacgtgggctacgcaccctacggcgtgcccgtggccggg
gcgccccccgggcccgctccgcagagcctcctgcctgcgctcccgggccccgactctgcc
ctggccgccccgcagccggcctacgtgcagggccagcagccgctgtaccagcaggtgccg
ccctccgccggcccgccgccccctggcgccccgcagccgcccgcgcaggcgccaccgccc
ggcagcgaggcacagctcatctccttcgactga
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