Sorex fumeus (smoky shrew): 130025049
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Entry
130025049 CDS
T10594
Symbol
COPB1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfum04131
]
130025049 (COPB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfum04147
]
130025049 (COPB1)
Membrane trafficking [BR:
sfum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130025049 (COPB1)
Exosome [BR:
sfum04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130025049 (COPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
130025049
NCBI-ProteinID:
XP_055971874
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLTLDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDNNEAAAADV
LEFVREAIQRFENLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEERP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNEIFNKECRESLSHMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNIIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIQQGPEAAVTGHIRIRAKSQGMALSLGDKINLSQKKSSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaatgtgtgctatacgttaattaacgtgccaatggattcggaacca
ccatctgaaattagcttaaagaatgatctagaaaaaggagatgtgaagtccaagactgaa
gctttgaaaaaagtaatcatcatgattctgaatggtgaaaaacttcctggacttctgatg
actatcattcgatttgtgctacctcttcaggatcataccattaaaaaattacttttggta
ttttgggaaatagttcctaaaacaactcctgatggaagacttttacatgaaatgatcctt
gtatgtgatgcatatagaaaggatcttcaacatcctaatgaattcattcgaggatcaact
cttcgttttctttgcaaattgaaagaagcagaattgctggaacctttaatgccagctatc
cgtgcttgtttggaacatcgacacagttatgtcagaagaaatgctgttttggccatctat
actatatatagaaattttgaacatcttatacctgatgctcctgaactgatacatgatttt
ctggttaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattacctaagtacttgtattgatcaagttcaaacatttgga
gacattcttcaattggttattgttgaactaatttataaggtctgtcatgctaatccatct
gaaagggctcgtttcattcgctgcatctataacttactacagtcatctagtcctgctgtg
aagtatgaagctgctggaacattagtgacactctctagtgcacctactgcaatcaaggct
gctgctcagtgttacattgatttaattattaaggagagtgacaacaatgtaaagctcata
gttctggatcgattgatagaattaaaagaacatcctgctcatgaacgagtgctgcaggat
ttggtcatggacatcctcagagttttgagcacaccagacttagaagtacgcaagaaaaca
ctacagttaacactggatcttgtctcttctaggaatgtggaagagttggttattgttctg
aagaaggaagtgattaaaacaaataatgtgtctgagcatgaagatactgataaatacaga
cagcttctcgtacgaacattgcattcctgttctgttcgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacaataatgaagcagcagctgctgatgtc
ctggagtttgttcgtgaggccattcaacgctttgagaacctaagaatgcttattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttaccgaggagcgttatgg
atcttgggagaatattgtagtaccaaggaagacattcaaagtgtaatgacagaggttcgc
aggtcccttggagagatccccattgtagagtctgaaataaagaaagaagctggtgaatta
aaacctgaggaagaaataactgtggggccagttcagaaattggttactgagatgggcacc
tatgctactcagagtgctctgagcagttccagacccaccaagaaagaggaagaaagacct
cccctgagaggatttcttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgccttgcgctatgtagctttggttcaggagaagaaaaagcaaaattct
tttgttgctgaagctatgttgctcatggccacaattcttcatttgggaaaatcctctctt
cctaagaagccgattacagatgacgacgtagatcgaatttccctttgtctcaaggtcttg
tctgaatgctcacctctgatgaatgaaattttcaataaggaatgcagagagtctctttct
catatgttatctgctaaacttgaagaagagaaattatctcaaaagaaagaatctgaaaag
agaaatgtgacagtacagcctgatgatcccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagaccagtttcagctgagtttgctggcagcaatgggcaacaca
cagaggaaagaggcagcagatcccctagcctccaaactaaacaaggtcactcagttgaca
ggtttctcagatcctgtatatgcagaagcttatgttcatgtcaatcagtatgatatcgtc
ctcgacgtacttgttgtgaaccaaaccagtgatactttgcagaactgcacattagagtta
gcaactctaggggatctgaaacttgtggaaaaaccatctcctttgactcttgcacctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcgacagaaaatggaataattttt
ggtaatatagtgtatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatattcacattgacatcatggactacatccagcctgcaacttgcactgatgctgagttc
cgtcagatgtgggctgaatttgaatgggaaaacaaagtaacagttaatacaaatataatc
gatttaaatgactacttacaacacatattaaagtcaacaaacatgaaatgccttactcca
gagaaggcactctctggttactgtggctttatggcagccaacctctatgctcgttctata
tttggagaggatgcacttgcaaatgtcagcattgagaaaccaatccaacagggaccagaa
gctgctgtcacaggccacataagaattcgtgcaaagagtcagggaatggccttaagtctt
ggagacaaaataaacttgtctcagaagaaaagcagtatataa
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