Sorex fumeus (smoky shrew): 130025064
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Entry
130025064 CDS
T10594
Symbol
PAAF1
Name
(RefSeq) proteasomal ATPase-associated factor 1 isoform X1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
sfum Sorex fumeus (smoky shrew)
Brite
KEGG Orthology (KO) [BR:
sfum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sfum03051
]
130025064 (PAAF1)
Proteasome [BR:
sfum03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
130025064 (PAAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
130025064
NCBI-ProteinID:
XP_055971901
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MAAPLRIQSDWAQAIRKDEGEAWLSCHPPGKPTLYGSLTCQGLGLDGIPEVIASEGFIVN
EINKKSIHISCPKENASSKFLAPYTTFSRIHGKSITCLDISSGGGLGVSCSADGTMKVWQ
AANGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDANCVVTFKGHTGGVL
DTAIVDRGRNVVSGSRDGTARLWDCGRSACLGVIGDCGAAINGVAVGTADNSINLGSPEQ
VPSEREVGTESKMLLLAREDKKLQCLGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQD
GNIYQLDARNPRVPVQVIHRSGAPVLSLLSFRDGFIASQGDGSCFIVQQDLDYVTELTGA
DCDPVYKPHGRSRSTHAAEMVLSDAISCLTSRPREAKESGQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcctttgaggattcagagcgactgggcgcaagccatcaggaaggatgaagga
gaggcctggctgagctgtcatcccccagggaaaccaactctttatggcagcctgacttgt
caaggacttggcctcgatggcatcccagaggttatagcttcagaaggattcattgtgaat
gaaataaataagaaaagcattcatatttcatgtccaaaagaaaatgcatcttcaaagttt
ttggcaccatatactacattttccagaattcatggaaagagtataacatgcttggacatc
tccagtggaggaggccttggtgtgtcttgtagtgccgatgggacgatgaaggtctggcag
gctgccaatggagagctcagaagagtattggaaggacatgtgtttgatgtgaattgttgc
aggtttttcccatcaggccttgtggttctgagtgggggaatggacgctcagctgaagatc
tggtcagctgaagatgctaactgcgtggtgaccttcaaaggtcacacaggaggtgttttg
gatacagccatcgttgatcgtggaaggaacgtggtgtctggttctcgggacgggacagcg
cgactctgggattgtgggcgctcggcctgcctgggcgtcattggagactgcggcgctgcc
atcaatggcgtggccgtgggcactgccgacaactccataaacctcggctcccccgagcaa
gtgcccagtgaacgggaggttggaacagagtcaaaaatgcttctgctggcccgggaagat
aagaagcttcagtgcttgggactccagagcaggcagccggtgttcctctttattggctca
gatgccttcaactgctgtacttttctctctggcttcttgctgttggctggaacccaggat
gggaacatttatcagctggatgcaaggaatccaagggttccagtccaagtcatccacaga
tcaggagcaccagttctgtccctgctgagtttcagagatggatttattgctagccaaggt
gatggaagctgtttcattgtccagcaggacctagactatgtcactgagctcactggggct
gactgtgaccctgtgtacaagccacatgggagaagcagatctacacatgcagccgagatg
gtcttatccgacgctatcagttgtctgacctctagaccccgggaagcaaaagaatccggt
caatga
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integrated database retrieval system
