Sorex fumeus (smoky shrew): 130025497
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Entry
130025497 CDS
T10594
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
sfum Sorex fumeus (smoky shrew)
Brite
DNA repair and recombination proteins [BR:
sfum03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130025497 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
130025497 (PARPBP)
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
130025497
NCBI-ProteinID:
XP_055972406
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Position
Unknown
AA seq
579 aa
AA seq
DB search
MAVLSQKSVLDMIKEFRRNWHTLCYSERTTVCGADAMLSVLQLSMAENNKRQSGEFEVSL
SDVLLTWKYLLHDKLNIPVEDMEMIDHYEDIRRTYDDCLRNSNMLDLIDVYQKCSAVVSN
CENNTSISPSQLLDFLSGRQNVVNDATDPYILRSPMSKHTQDNEKVQLLAKKIICSYLSL
LVNSKNDLALAHILNIPDRGLGREAFTDLKHAAREKHLSIFLVATSFIRALELGGKGYAP
SPSDPLRTHVKGLSNFINFIDKLDEILGEIPNPSIAGSRILSVIKMQLIKGQNSRDPFYK
AVEEVAQDLDLRIKAIINSQQGNVTVNTTDISPARPKSYTINHGTAYCGRDTVKMLLVLL
DEEAASAPTKNKADLLYDDENTVLPNGISMLTLYRSPTQVNNLSIKPLRERIHESVQEKK
IKMRQTLIRSQFACTYKDDYMINKNKRNNVDPASEPLSVLHMKNDLSESVSSSVGRPTFG
SSSGNVHLDRSKNEKARKPSSQTGNKSSKRKQVDLDDENILCDNGNEPPQHKNVKLPKIS
NNLQNKVDGKLTKVAKINKSTSKNKLLTGQTKLTQFFRL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctcagccagaagtccgtgttggatatgattaaagagttcagaaggaattgg
cacacactttgttactctgagaggactactgtgtgtggggcagacgccatgctctcggtg
ctacagctttctatggccgagaacaacaaacggcaaagtggagaatttgaagtctctctc
agcgatgtcttattaacctggaaatatttattacatgataaattgaacataccagttgaa
gatatggaaatgatcgaccattatgaggacattcgaaggacttatgatgattgtttaaga
aatagcaacatgttagatctgattgatgtctatcaaaaatgcagtgctgtcgtttctaat
tgtgaaaataataccagcatatccccaagtcaactactggattttctgtctggaagacag
aatgtggtaaatgatgcaactgatccttatatactgagatcaccaatgagtaagcatacc
caagataatgagaaggtacagttattagcgaagaaaattatctgctcctatttaagtctg
ctagtgaattcaaagaatgatctggctctggctcatattctgaatattcctgatagaggg
cttgggagagaagcgttcacagatttgaaacatgccgctcgagagaagcatttgtctatc
tttttggttgccacatcttttattagagcattagagcttggagggaaaggatatgcacca
tcaccatctgatcctttaaggacacatgtgaaaggattatctaattttattaatttcatt
gacaaattagatgagattcttggagagattccaaatcccagcattgcagggagtcggata
ctctcagtgataaagatgcagctgattaaaggccagaacagtagggatcctttttataaa
gcagtagaggaagttgctcaggatttggacttgaggattaaagctattatcaattctcaa
caaggaaatgtcactgttaacaccactgacatcagtcctgcacggccaaaatcttatacc
ataaaccatggcactgcatactgtggcagagatactgtgaaaatgttactggttcttttg
gatgaagaggcagccagtgcacctaccaaaaacaaagcagaccttttatatgatgatgaa
aacacagttcttcctaatggaatttctatgcttacactttacaggtctcccacgcaagtg
aataatttatccataaaacccctaagagaacgcatccatgagtcagttcaagagaagaaa
atcaagatgagacaaaccttaattagatctcagtttgcttgtacttacaaagatgactac
atgataaacaagaataaacgaaataatgttgatccagcatcagagcctttgagtgttctt
cacatgaaaaatgacctttctgagagtgtcagttcctctgttggaagacccacatttgga
tcaagttctggaaatgtccatctggacagaagtaaaaatgaaaaagcaagaaaaccaagt
agtcagacaggaaataaaagctcaaaaaggaaacaggtggacttggacgatgaaaatatt
ctgtgtgataacggaaatgaaccacctcaacataaaaatgttaagctccctaagatttca
aacaatttgcagaataaagtggatggcaaactaaccaaagttgcaaaaatcaacaagagt
accagcaagaacaaattgcttactggccagacaaagttaactcagtttttcagactgtga
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